Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold241G44210 Striga asiatica HOM05D000476 ORTHO05D028872 7.4e-130 467.2 238 100.0
SGA_v2.0_scaffold58G20351 Striga asiatica HOM05D000476 ORTHO05D005719 5.0e-86 321.6 214 80.8
Hma1.2p1_0163F.1_g072630 Hydrangea macrophylla HOM05D000476 ORTHO05D005719 2.1e-44 183.3 198 54.0
Migut.B00063 Erythranthe guttata HOM05D000476 ORTHO05D005719 4.7e-44 182.2 212 53.3
MSTRG.16926 Avicennia marina HOM05D000476 ORTHO05D005719 8.1e-44 181.4 200 56.5
Cc09_g10250 Coffea canephora HOM05D000476 ORTHO05D005719 2.3e-43 179.9 201 55.2
unitig_0.g814 Utricularia gibba HOM05D000476 ORTHO05D005719 1.2e-42 177.6 216 52.8
SGA_v2.0_scaffold55G19717 Striga asiatica HOM05D000476 ORTHO05D028872 2.9e-41 172.9 107 83.2
Dinv41922 Davidia involucrata HOM05D000476 ORTHO05D005719 8.3e-41 171.4 205 52.7
Peaxi162Scf00362g00535 Petunia axillaris HOM05D000476 ORTHO05D005719 1.1e-40 171.0 200 52.5
Thecc.02G056200 Theobroma cacao HOM05D000476 ORTHO05D005719 1.9e-40 170.2 210 48.6
CSS0012841 Camellia sinensis var. sinensis HOM05D000476 ORTHO05D005719 2.4e-40 169.9 198 53.5
vmacro02286 Vaccinium macrocarpon HOM05D000476 ORTHO05D005719 3.2e-40 169.5 205 52.2
Oeu029648.1 Olea europaea HOM05D000476 ORTHO05D005719 1.6e-39 167.2 198 50.5
SalBow1G8296 Salvia bowleyana HOM05D000476 ORTHO05D005719 1.0e-38 164.5 204 52.0
Actinidia18045 Actinidia chinensis HOM05D000476 ORTHO05D005719 5.6e-37 158.7 199 51.3
Actinidia20522 Actinidia chinensis HOM05D000476 ORTHO05D005719 9.5e-37 157.9 199 50.3
Rhsim11G0193200 Rhododendron simsii HOM05D000476 ORTHO05D005719 1.2e-36 157.5 197 52.3
PGSC0003DMG400018042 Solanum tuberosum HOM05D000476 ORTHO05D005719 1.1e-35 154.5 205 47.3
Duzib248G0030 Durio zibethinus HOM05D000476 ORTHO05D005719 2.4e-35 153.3 216 46.3
TAR381G1633 Trochodendron aralioides HOM05D000476 ORTHO05D005719 4.0e-35 152.5 209 48.3
Cfa005281 Carpinus fangiana HOM05D000476 ORTHO05D005719 5.2e-35 152.1 203 49.8
Nitab4.5_0003698g0070 Nicotiana tabacum HOM05D000476 ORTHO05D005719 5.2e-35 152.1 207 47.8
Aqoxy5G01114 Aquilegia oxysepala HOM05D000476 ORTHO05D005719 8.9e-35 151.4 206 47.1
Nitab4.5_0004864g0010 Nicotiana tabacum HOM05D000476 ORTHO05D005719 8.9e-35 151.4 205 46.8
Haze_02112 Corylus avellana HOM05D000476 ORTHO05D005719 1.2e-34 151.0 205 49.3
CANSAT25G2378 Cannabis sativa HOM05D000476 ORTHO05D005719 2.6e-34 149.8 214 47.2
Sopen01g053780 Solanum pennellii HOM05D000476 ORTHO05D005719 3.4e-34 149.4 201 46.8
Solyc01g111740.3 Solanum lycopersicum HOM05D000476 ORTHO05D005719 4.4e-34 149.1 201 46.8
TAR381G1494 Trochodendron aralioides HOM05D000476 ORTHO05D005719 7.6e-34 148.3 208 46.6
PSO210G5945 Papaver somniferum HOM05D000476 ORTHO05D005719 1.3e-33 147.5 214 44.9
Ciclev10030360m.g Citrus clementina HOM05D000476 ORTHO05D005719 2.2e-33 146.7 233 41.6
TWI75G0421 Tripterygium wilfordii HOM05D000476 ORTHO05D005719 2.9e-33 146.4 216 45.4
Eucgr.I01453 Eucalyptus grandis HOM05D000476 ORTHO05D005719 4.9e-33 145.6 160 51.2
Psat6g232560 Pisum sativum HOM05D000476 ORTHO05D005719 1.1e-32 144.4 227 44.1
Medtr1g112850 Medicago truncatula HOM05D000476 ORTHO05D005719 1.9e-32 143.7 217 44.7
QL11p051500 Quercus lobata HOM05D000476 ORTHO05D005719 1.9e-32 143.7 204 46.6
PSO170G5898 Papaver somniferum HOM05D000476 ORTHO05D005719 3.2e-32 142.9 226 42.9
Lj9A397G33 Lonicera japonica HOM05D000476 ORTHO05D005719 9.2e-32 141.4 210 47.1
THA.LOC104804321 Tarenaya hassleriana HOM05D000476 ORTHO05D005719 9.2e-32 141.4 215 46.0
Lj9C400T3 Lonicera japonica HOM05D000476 ORTHO05D005719 1.6e-31 140.6 208 47.1
FvH4_2g15580 Fragaria vesca HOM05D000476 ORTHO05D005719 3.5e-31 139.4 217 44.2
FAN24G1070 Fragaria x ananassa HOM05D000476 ORTHO05D005719 4.6e-31 139.0 216 44.4
MD05G1124400 Malus domestica HOM05D000476 ORTHO05D005719 1.0e-30 137.9 208 44.2
MD10G1127200 Malus domestica HOM05D000476 ORTHO05D005719 1.0e-30 137.9 210 45.2
TWI31G0618 Tripterygium wilfordii HOM05D000476 ORTHO05D005719 2.3e-30 136.7 210 43.8
RcHm_v2.0_Chr6g0278761 Rosa chinensis HOM05D000476 ORTHO05D005719 6.6e-30 135.2 220 43.6
SGA_v2.0_scaffold143G35762 Striga asiatica HOM05D000476 ORTHO05D029332 6.6e-30 135.2 75 89.3
ClCG02G012060 Citrullus lanatus HOM05D000476 ORTHO05D005719 1.1e-29 134.4 202 46.0
DCAR_022959 Daucus carota HOM05D000476 ORTHO05D005719 1.1e-29 134.4 225 41.8
FAN20G0044 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.5e-29 134.0 215 43.7
CAN.G588.95 Capsicum annuum HOM05D000476 ORTHO05D005719 1.9e-29 133.7 204 44.6
Cpa.g.sc20.106 Carica papaya HOM05D000476 ORTHO05D005719 1.9e-29 133.7 217 42.9
Nn6g31926 Nelumbo nucifera HOM05D000476 ORTHO05D005719 1.9e-29 133.7 207 44.9
Sed0017619 Sechium edule HOM05D000476 ORTHO05D005719 3.3e-29 132.9 210 45.2
Potri.004G177200 Populus trichocarpa HOM05D000476 ORTHO05D005719 4.3e-29 132.5 217 43.8
Manes.04G071400 Manihot esculenta HOM05D000476 ORTHO05D005719 5.6e-29 132.1 197 46.7
Ah.01g008190 Amaranthus hybridus HOM05D000476 ORTHO05D005719 7.3e-29 131.7 230 41.3
Prupe.8G168100 Prunus persica HOM05D000476 ORTHO05D005719 1.2e-28 131.0 206 43.2
Sabra04G0119100 Salix brachista HOM05D000476 ORTHO05D005719 1.2e-28 131.0 207 45.4
Prupe.7G174500 Prunus persica HOM05D000476 ORTHO05D005719 1.6e-28 130.6 219 42.0
FAN27G1175 Fragaria x ananassa HOM05D000476 ORTHO05D005719 2.1e-28 130.2 218 41.7
Sed0002256 Sechium edule HOM05D000476 ORTHO05D005719 2.8e-28 129.8 209 43.1
MELO3C020830.2 Cucumis melo HOM05D000476 ORTHO05D005719 8.1e-28 128.3 198 45.5
Gorai.002G199800 Gossypium raimondii HOM05D000476 ORTHO05D005719 1.1e-27 127.9 222 41.4
CsaV3_2G016220 Cucumis sativus L. HOM05D000476 ORTHO05D005719 1.8e-27 127.1 197 43.7
CiPaw.05G084600 Carya illinoinensis HOM05D000476 ORTHO05D005719 3.1e-27 126.3 205 42.9
Potri.009G137500 Populus trichocarpa HOM05D000476 ORTHO05D005719 3.1e-27 126.3 209 43.1
Ca_03300_v3 Cicer arietinum L. HOM05D000476 ORTHO05D005719 4.0e-27 125.9 222 41.0
Glyma.20G106700 Glycine max HOM05D000476 ORTHO05D005719 6.9e-27 125.2 235 39.6
Thecc.01G012000 Theobroma cacao HOM05D000476 ORTHO05D005719 6.9e-27 125.2 222 38.3
HanXRQChr10g0300811 Helianthus annuus HOM05D000476 ORTHO05D005719 9.0e-27 124.8 210 41.9
TPR.G2472 Trifolium pratense HOM05D000476 ORTHO05D005719 9.0e-27 124.8 228 39.9
Gohir.A01G170100 Gossypium hirsutum HOM05D000476 ORTHO05D005719 1.2e-26 124.4 223 41.3
Gohir.D01G161200 Gossypium hirsutum HOM05D000476 ORTHO05D005719 1.2e-26 124.4 226 40.3
Sc18g0006370 Simmondsia chinensis HOM05D000476 ORTHO05D005719 1.2e-26 124.4 206 43.7
FAN15G2981 Fragaria x ananassa HOM05D000476 ORTHO05D005719 2.0e-26 123.6 216 40.3
Glyma.10G283000 Glycine max HOM05D000476 ORTHO05D005719 4.4e-26 122.5 226 40.3
Lj5g0010360 Lotus japonicus HOM05D000476 ORTHO05D005719 9.9e-26 121.3 215 41.9
Gohir.A02G173900 Gossypium hirsutum HOM05D000476 ORTHO05D005719 4.9e-25 119.0 213 40.4
Gohir.D03G005900 Gossypium hirsutum HOM05D000476 ORTHO05D005719 1.1e-24 117.9 213 38.5
Gorai.003G006300 Gossypium raimondii HOM05D000476 ORTHO05D005719 1.1e-24 117.9 213 38.5
Duzib147G1555 Durio zibethinus HOM05D000476 ORTHO05D005719 2.4e-24 116.7 227 37.4
Sabra09G0106700 Salix brachista HOM05D000476 ORTHO05D005719 2.4e-24 116.7 207 41.5
Lalb_Chr21g0307031 Lupinus albus HOM05D000476 ORTHO05D005719 4.2e-24 115.9 229 37.6
arahy.Tifrunner.gnm1.ann1.5E9YX9 Arachis hypogaea HOM05D000476 ORTHO05D005719 9.3e-24 114.8 228 37.3
QL06p051967 Quercus lobata HOM05D000476 ORTHO05D005719 9.3e-24 114.8 211 39.8
COL.COLO4_22490 Corchorus olitorius HOM05D000476 ORTHO05D005719 1.2e-23 114.4 207 37.7
Atru.chr5.3386 Acer truncatum HOM05D000476 ORTHO05D005719 2.1e-23 113.6 246 37.0
VMungo0720G1528 Vigna mungo HOM05D000476 ORTHO05D005719 2.1e-23 113.6 226 38.9
GSVIVG01023992001 Vitis vinifera HOM05D000476 ORTHO05D005719 2.1e-23 113.6 161 42.9
FAN26G0730 Fragaria x ananassa HOM05D000476 ORTHO05D005719 2.7e-23 113.2 207 41.5
Manes.01G150500 Manihot esculenta HOM05D000476 ORTHO05D005719 3.5e-23 112.8 216 37.5
Phvul.007G018200 Phaseolus vulgaris HOM05D000476 ORTHO05D005719 4.6e-23 112.5 226 38.5
Dinv40142 Davidia involucrata HOM05D000476 ORTHO05D005719 6.0e-23 112.1 205 39.5
Lsat_1_v5_gn_4_71841 Lactuca sativa HOM05D000476 ORTHO05D005719 7.8e-23 111.7 233 39.1
FvH4_1g11140 Fragaria vesca HOM05D000476 ORTHO05D005719 1.3e-22 110.9 206 41.3
FAN19G2503 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.3e-22 110.9 206 41.3
arahy.Tifrunner.gnm1.ann1.FXE6P8 Arachis hypogaea HOM05D000476 ORTHO05D005719 1.7e-22 110.5 232 37.1
FAN23G2355 Fragaria x ananassa HOM05D000476 ORTHO05D005719 1.7e-22 110.5 207 41.1
RcHm_v2.0_Chr2g0098421 Rosa chinensis HOM05D000476 ORTHO05D005719 1.7e-22 110.5 206 42.7
Potri.005G108400 Populus trichocarpa HOM05D000476 ORTHO05D005719 3.9e-22 109.4 219 37.4
Ah.01g023180 Amaranthus hybridus HOM05D000476 ORTHO05D005719 6.6e-22 108.6 212 38.2
FAN28G1417 Fragaria x ananassa HOM05D000476 ORTHO05D005719 6.6e-22 108.6 207 40.6
SGA_v2.0_scaffold143G35761 Striga asiatica HOM05D000476 ORTHO05D028872 6.6e-22 108.6 83 69.9
HPP92_020729 Vanilla planifolia HOM05D000476 ORTHO05D005719 6.6e-22 108.6 194 40.2
Manes.02G109900 Manihot esculenta HOM05D000476 ORTHO05D005719 8.7e-22 108.2 219 37.4
Dinv14122 Davidia involucrata HOM05D000476 ORTHO05D005719 4.3e-21 105.9 102 55.9
Sabra05G0088800 Salix brachista HOM05D000476 ORTHO05D005719 9.6e-21 104.8 219 37.0
Duzib132G1235 Durio zibethinus HOM05D000476 ORTHO05D005719 2.8e-20 103.2 210 37.1
Cpa.g.sc6.308 Carica papaya HOM05D000476 ORTHO05D005719 6.2e-20 102.1 215 35.3
Hund06447 Selenicereus undatus HOM05D000476 ORTHO05D005719 8.1e-20 101.7 241 37.3
Ca_11939_v3 Cicer arietinum L. HOM05D000476 ORTHO05D028872 1.8e-19 100.5 113 51.3
EL10Ac9g21346 Beta vulgaris HOM05D000476 ORTHO05D005719 2.4e-19 100.1 236 36.9
ECA234G3651 Erigeron canadensis HOM05D000476 ORTHO05D005719 2.4e-19 100.1 204 39.2
CANSAT01G2246 Cannabis sativa HOM05D000476 ORTHO05D005719 9.0e-19 98.2 209 37.3
CDE09G0394 Ceratophyllum demersum HOM05D000476 ORTHO05D005719 5.8e-18 95.5 208 38.5
Haze_03708 Corylus avellana HOM05D000476 ORTHO05D005719 3.8e-17 92.8 206 37.4
GSVIVG01005188001 Vitis vinifera HOM05D000476 ORTHO05D005719 6.4e-17 92.0 190 35.3
GSVIVG01006889001 Vitis vinifera HOM05D000476 ORTHO05D005719 6.4e-17 92.0 190 35.3
Hma1.2p1_0561F.1_g178970 Hydrangea macrophylla HOM05D000476 ORTHO05D005719 2.4e-16 90.1 201 37.3
SGA_v2.0_scaffold55G19716 Striga asiatica HOM05D000476 ORTHO05D029332 1.0e-14 84.7 51 88.2
PGR142G3087 Punica granatum HOM05D000476 ORTHO05D005719 2.8e-12 76.6 223 30.9
COL.COLO4_17370 Corchorus olitorius HOM05D000476 ORTHO05D005719 6.2e-12 75.5 68 60.3
Lsat_1_v5_gn_4_144401 Lactuca sativa HOM05D000476 ORTHO05D005719 9.0e-11 71.6 160 36.2
AUR62010017 Chenopodium quinoa HOM05D000476 ORTHO05D005719 2.9e-09 66.6 230 31.3
AUR62026229 Chenopodium quinoa HOM05D000476 ORTHO05D005719 2.9e-09 66.6 144 30.6
HanXRQChr09g0257241 Helianthus annuus HOM05D000476 ORTHO05D005719 4.2e-08 62.8 62 53.2
Nn5g30832 Nelumbo nucifera HOM05D000476 ORTHO05D005719 3.5e-07 59.7 195 31.3
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 4.6e-07 59.3 50 58.0
EL10Ac6g13329 Beta vulgaris HOM05D000476 ORTHO05D005719 6.0e-07 58.9 62 48.4
Sc03g0003760 Simmondsia chinensis HOM05D000476 ORTHO05D005719 7.9e-07 58.5 189 32.3
Lj2A484T43 Lonicera japonica HOM05D000476 ORTHO05D005719 1.0e-06 58.2 75 45.3
BcaNung04413 Brassica carinata HOM05D000476 ORTHO05D004987 2.3e-06 57.0 197 29.4
Hund14172 Selenicereus undatus HOM05D000476 ORTHO05D005719 2.3e-06 57.0 73 45.2
A01p08010 Brassica napus HOM05D000476 ORTHO05D004987 3.0e-06 56.6 195 29.2
BraA01t00746Z Brassica rapa HOM05D000476 ORTHO05D004987 3.0e-06 56.6 195 29.2
Thecc.02G056700 Theobroma cacao HOM05D000476 ORTHO05D029332 3.0e-06 56.6 74 50.0
BcaC09g51792 Brassica carinata HOM05D000476 ORTHO05D004987 8.7e-06 55.1 204 28.9
C01p08970 Brassica napus HOM05D000476 ORTHO05D004987 8.7e-06 55.1 204 28.9
BolC1t00887H Brassica oleracea HOM05D000476 ORTHO05D004987 8.7e-06 55.1 204 28.9


User provided reference genes

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