Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold240G44168 Striga asiatica HOM05D010223 ORTHO05D012491 0.0e+00 1194.5 613 100.0
SGA_v2.0_scaffold39G15275 Striga asiatica HOM05D010223 ORTHO05D012491 8.7e-175 617.8 602 56.3
SGA_v2.0_scaffold354G49734 Striga asiatica HOM05D010223 ORTHO05D012491 4.5e-131 472.6 749 41.0
Medtr7g015420 Medicago truncatula HOM05D000041 ORTHO05D000061 1.2e-35 155.6 402 29.4
THA.LOC104824424 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 3.6e-35 154.1 354 28.2
THA.LOC104825587 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 1.8e-34 151.8 353 26.9
SGA_v2.0_scaffold449G51797 Striga asiatica HOM05D010223 ORTHO05D000048 2.5e-33 147.9 235 40.4
THA.LOC104814124 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 4.3e-33 147.1 370 25.9
THA.LOC104801502 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 1.1e-31 142.5 366 24.6
Lsat_1_v5_gn_0_32321 Lactuca sativa HOM05D010223 ORTHO05D012491 1.1e-28 132.5 452 24.6
TPR.G11079 Trifolium pratense HOM05D010223 ORTHO05D012491 2.1e-27 128.3 183 33.3
THA.LOC104820443 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 3.3e-25 120.9 369 23.0
THA.LOC104805966 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 1.1e-23 115.9 369 22.5
THA.LOC104818135 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 4.1e-23 114.0 369 22.5
THA.LOC104821145 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 9.1e-23 112.8 354 24.0
THA.LOC104804877 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 1.2e-22 112.5 354 24.3
THA.LOC104816123 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 6.5e-21 106.7 368 20.9
PGR042G2830 Punica granatum HOM05D010223 ORTHO05D012491 1.1e-20 105.9 469 26.2
PGR083G0991 Punica granatum HOM05D010223 ORTHO05D012491 1.2e-19 102.4 486 25.5
ECA232G2178 Erigeron canadensis HOM05D003069 ORTHO05D016972 1.6e-14 85.5 234 29.5
TPR.G8959 Trifolium pratense HOM05D030604 ORTHO05D030693 1.0e-13 82.8 169 35.5
ECA232G1307 Erigeron canadensis HOM05D003069 ORTHO05D000002 1.7e-13 82.0 234 28.6
ECA232G4467 Erigeron canadensis HOM05D003069 ORTHO05D016972 6.5e-13 80.1 236 28.8
TPR.G35070 Trifolium pratense HOM05D030604 ORTHO05D030693 4.2e-12 77.4 139 38.1
Ciclev10005136m.g Citrus clementina HOM05D017056 ORTHO05D019029 5.7e-09 67.0 233 26.2
Haze_10590 Corylus avellana HOM05D021992 ORTHO05D016972 2.0e-06 58.5 529 22.5


User provided reference genes

Program Settings