Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold240G44139 Striga asiatica HOM05D017425 ORTHO05D019383 9.5e-213 743.4 426 100.0
SGA_v2.0_scaffold326G48722 Striga asiatica HOM05D017425 ORTHO05D019383 9.5e-213 743.4 426 100.0
SGA_v2.0_scaffold32G13121 Striga asiatica HOM05D017425 ORTHO05D019383 9.5e-213 743.4 426 100.0
SGA_v2.0_scaffold21G09397 Striga asiatica HOM05D017425 ORTHO05D019383 5.3e-163 578.2 329 86.3
SGA_v2.0_scaffold41G15799 Striga asiatica HOM05D017425 ORTHO05D019383 4.6e-159 565.1 301 91.0
SGA_v2.0_scaffold341G49383 Striga asiatica HOM05D017425 ORTHO05D019383 1.5e-146 523.5 316 82.6
SGA_v2.0_scaffold116G32293 Striga asiatica HOM05D017425 ORTHO05D019383 1.6e-130 470.3 325 74.2
SGA_v2.0_scaffold416G51226 Striga asiatica HOM05D017425 ORTHO05D019383 6.8e-118 428.3 291 74.6
ECA233G2044 Erigeron canadensis HOM05D002069 ORTHO05D001421 8.3e-15 85.9 317 21.1
DCAR_017193 Daucus carota HOM05D002069 ORTHO05D001421 1.1e-14 85.5 296 20.9
DCAR_018055 Daucus carota HOM05D002069 ORTHO05D001421 4.1e-14 83.6 315 23.2
HanXRQChr04g0112951 Helianthus annuus HOM05D002069 ORTHO05D001421 7.0e-14 82.8 314 23.6
HanXRQChr11g0351751 Helianthus annuus HOM05D002069 ORTHO05D001421 7.0e-14 82.8 314 23.6
DCAR_011112 Daucus carota HOM05D008184 ORTHO05D001421 9.1e-14 82.4 318 25.8
HanXRQChr10g0309881 Helianthus annuus HOM05D002069 ORTHO05D001421 2.7e-13 80.9 261 24.5
DCAR_024115 Daucus carota HOM05D010768 ORTHO05D010791 3.5e-13 80.5 290 25.9
HanXRQChr08g0223541 Helianthus annuus HOM05D002069 ORTHO05D001421 3.5e-13 80.5 306 21.6
SGA_v2.0_scaffold309G48185 Striga asiatica HOM05D002069 ORTHO05D002997 1.0e-12 79.0 319 23.5
AUR62018056 Chenopodium quinoa HOM05D007817 ORTHO05D010493 1.7e-12 78.2 253 25.7
AUR62008492 Chenopodium quinoa HOM05D007817 ORTHO05D010493 2.2e-12 77.8 253 25.3
DCAR_015033 Daucus carota HOM05D002069 ORTHO05D001421 2.2e-12 77.8 279 21.5
Lsat_1_v5_gn_4_60840 Lactuca sativa HOM05D005502 ORTHO05D001421 2.9e-12 77.4 240 24.2
DCAR_001468 Daucus carota HOM05D002069 ORTHO05D001421 5.0e-12 76.6 290 25.5
Lsat_1_v5_gn_6_93140 Lactuca sativa HOM05D005502 ORTHO05D001421 6.5e-12 76.3 240 23.8
Lsat_1_v5_gn_0_33721 Lactuca sativa HOM05D002069 ORTHO05D001421 4.2e-11 73.6 324 25.9
Lsat_1_v5_gn_9_99100 Lactuca sativa HOM05D002069 ORTHO05D001421 4.7e-10 70.1 324 24.7
HanXRQChr07g0191861 Helianthus annuus HOM05D002069 ORTHO05D001421 8.0e-10 69.3 177 28.2
Lsat_1_v5_gn_5_166541 Lactuca sativa HOM05D005502 ORTHO05D001421 1.4e-09 68.6 300 20.3
Lsat_1_v5_gn_2_135660 Lactuca sativa HOM05D005502 ORTHO05D001421 2.3e-09 67.8 304 20.7
DCAR_031319 Daucus carota HOM05D008184 ORTHO05D002997 3.0e-09 67.4 300 23.0
DCAR_001028 Daucus carota HOM05D008184 ORTHO05D002997 8.8e-09 65.9 195 26.7
DCAR_017420 Daucus carota HOM05D036185 ORTHO05D001421 2.0e-08 64.7 288 21.2
DCAR_031539 Daucus carota HOM05D002069 ORTHO05D001421 2.0e-08 64.7 291 22.0
AUR62015778 Chenopodium quinoa HOM05D007817 ORTHO05D010493 2.6e-08 64.3 176 25.0
AUR62039344 Chenopodium quinoa HOM05D007817 ORTHO05D001421 4.4e-08 63.5 150 31.3
Lsat_1_v5_gn_8_44320 Lactuca sativa HOM05D005502 ORTHO05D001421 4.4e-08 63.5 299 19.7
DCAR_010268 Daucus carota HOM05D002069 ORTHO05D001421 2.2e-07 61.2 210 23.8
Lsat_1_v5_gn_8_34680 Lactuca sativa HOM05D005502 ORTHO05D001421 2.2e-07 61.2 243 21.0
EL10Ac7g17236 Beta vulgaris HOM05D002461 ORTHO05D000898 3.7e-07 60.5 228 23.2
Lsat_1_v5_gn_5_47200 Lactuca sativa HOM05D005502 ORTHO05D001421 3.7e-07 60.5 132 30.3
Lsat_1_v5_gn_3_13460 Lactuca sativa HOM05D005502 ORTHO05D001421 6.3e-07 59.7 307 20.5
AUR62010442 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.3e-07 59.3 272 26.5
AUR62038887 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.3e-07 59.3 272 26.5
AUR62039346 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.3e-07 59.3 272 26.5
AUR62044283 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.3e-07 59.3 272 26.5
DCAR_005112 Daucus carota HOM05D008184 ORTHO05D001421 1.1e-06 58.9 265 23.0
AUR62013764 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-06 58.5 272 26.5
ECA232G4022 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.4e-06 58.5 149 25.5
ECA238G1870 Erigeron canadensis HOM05D000097 ORTHO05D001421 1.4e-06 58.5 237 21.9
ECA240G0553 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.4e-06 57.8 236 22.9
AUR62002595 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-06 57.4 272 26.1
AUR62005650 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-06 57.4 272 26.1
AUR62008643 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-06 57.4 272 26.1
AUR62024534 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-06 57.4 272 26.1
AUR62024696 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-06 57.4 272 26.1
AUR62031767 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-06 57.4 272 26.1
AUR62033912 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-06 57.4 272 26.1
AUR62035885 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-06 57.4 272 26.1
AUR62038642 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-06 57.4 272 26.1
ECA233G0231 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.1e-06 57.4 236 22.9
DCAR_030060 Daucus carota HOM05D014044 ORTHO05D015632 5.4e-06 56.6 160 28.1
SGA_v2.0_scaffold166G38398 Striga asiatica HOM05D002069 ORTHO05D002997 7.0e-06 56.2 197 21.8


User provided reference genes

Program Settings