Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold240G44132 Striga asiatica HOM05D020435 ORTHO05D016160 2.2e-88 328.9 168 100.0
SGA_v2.0_scaffold69G23181 Striga asiatica HOM05D002399 ORTHO05D002479 2.7e-22 109.4 143 47.6
SGA_v2.0_scaffold73G24394 Striga asiatica HOM05D003130 ORTHO05D003547 7.5e-20 101.3 72 73.6
CSS0026821 Camellia sinensis var. sinensis HOM05D020435 ORTHO05D016160 3.7e-19 99.0 141 44.7
Os01g0737550 Oryza sativa ssp. japonica HOM05D019026 ORTHO05D016160 4.7e-14 82.0 162 37.0
SGA_v2.0_scaffold66G22304 Striga asiatica HOM05D020435 ORTHO05D016160 8.3e-11 71.2 101 44.6
Hma1.2p1_1283F.1_g272820 Hydrangea macrophylla HOM05D020435 ORTHO05D016160 1.1e-10 70.9 66 60.6
Os01g0660450 Oryza sativa ssp. japonica HOM05D019026 ORTHO05D016160 9.2e-10 67.8 147 34.7
CSS0035570 Camellia sinensis var. sinensis HOM05D020435 ORTHO05D016160 5.0e-08 62.0 141 34.8
Os04g0225067 Oryza sativa ssp. japonica HOM05D019026 ORTHO05D016160 9.5e-07 57.8 143 32.2
arahy.Tifrunner.gnm1.ann1.539A01 Arachis hypogaea HOM05D014715 ORTHO05D016643 6.2e-06 55.1 138 32.6
Os07g0112351 Oryza sativa ssp. japonica HOM05D019026 ORTHO05D295044 6.2e-06 55.1 136 36.0


User provided reference genes

Program Settings