Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold240G44104 Striga asiatica HOM05D004233 ORTHO05D003507 3.1e-54 214.9 111 100.0
MSTRG.10228 Avicennia marina HOM05D004233 ORTHO05D003507 2.2e-15 85.9 96 54.2
SalBow4G0303 Salvia bowleyana HOM05D004233 ORTHO05D003507 1.4e-14 83.2 91 53.8
Oeu030524.1 Olea europaea HOM05D004233 ORTHO05D003507 3.4e-13 78.6 108 50.0
Rhsim04G0131700 Rhododendron simsii HOM05D004233 ORTHO05D003507 1.0e-12 77.0 114 47.4
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 1.7e-12 76.3 106 45.3
Migut.L01999 Erythranthe guttata HOM05D004233 ORTHO05D003507 2.9e-12 75.5 126 42.1
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 8.5e-12 73.9 102 47.1
Oeu055173.1 Olea europaea HOM05D004233 ORTHO05D003507 8.5e-12 73.9 108 47.2
SalBow4G1886 Salvia bowleyana HOM05D004233 ORTHO05D003507 4.2e-11 71.6 83 49.4
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 5.5e-11 71.2 113 46.9
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 5.5e-11 71.2 113 46.9
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 9.4e-11 70.5 113 46.0
Potri.016G112700 Populus trichocarpa HOM05D004233 ORTHO05D003507 1.2e-10 70.1 110 45.5
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.7e-10 68.9 113 46.0
Oeu024626.1 Olea europaea HOM05D004233 ORTHO05D003507 2.7e-10 68.9 108 41.7
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 7.9e-10 67.4 108 42.6
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 1.0e-09 67.0 113 39.8
Thecc.05G020400 Theobroma cacao HOM05D004233 ORTHO05D003507 2.3e-09 65.9 99 45.5
Cpa.g.sc163.4 Carica papaya HOM05D004233 ORTHO05D003507 3.0e-09 65.5 102 45.1
Ciclev10013109m.g Citrus clementina HOM05D004233 ORTHO05D003507 3.9e-09 65.1 100 44.0
Lsat_1_v5_gn_9_35941 Lactuca sativa HOM05D004233 ORTHO05D003507 5.1e-09 64.7 100 44.0
Duzib128G0556 Durio zibethinus HOM05D004233 ORTHO05D003507 1.5e-08 63.2 100 43.0
DCAR_018722 Daucus carota HOM05D004233 ORTHO05D003507 1.9e-08 62.8 88 46.6
Sabra16G0108400 Salix brachista HOM05D004233 ORTHO05D003507 5.7e-08 61.2 110 41.8
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 7.4e-08 60.8 100 44.0
Duzib106G0630 Durio zibethinus HOM05D004233 ORTHO05D003507 1.3e-07 60.1 100 42.0
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 1.7e-07 59.7 114 39.5
FAN09G0897 Fragaria x ananassa HOM05D004233 ORTHO05D003507 1.7e-07 59.7 115 39.1
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 2.2e-07 59.3 100 41.0
Glyma.03G078400 Glycine max HOM05D004233 ORTHO05D003507 2.2e-07 59.3 90 40.0
FvH4_6g11920 Fragaria vesca HOM05D004233 ORTHO05D003507 4.8e-07 58.2 115 38.3
FAN02G0664 Fragaria x ananassa HOM05D004233 ORTHO05D003507 4.8e-07 58.2 115 38.3
FAN05G3657 Fragaria x ananassa HOM05D004233 ORTHO05D003507 4.8e-07 58.2 112 38.4
FAN14G3430 Fragaria x ananassa HOM05D004233 ORTHO05D003507 4.8e-07 58.2 115 38.3
FAN14G4547 Fragaria x ananassa HOM05D004233 ORTHO05D003507 4.8e-07 58.2 115 38.3
RcHm_v2.0_Chr3g0463681 Rosa chinensis HOM05D004233 ORTHO05D003507 6.3e-07 57.8 116 38.8
Sabra06G0075200 Salix brachista HOM05D004233 ORTHO05D003507 6.3e-07 57.8 91 44.0
Eucgr.K02995 Eucalyptus grandis HOM05D004233 ORTHO05D003507 1.4e-06 56.6 100 37.0
ClCG04G007170 Citrullus lanatus HOM05D004233 ORTHO05D003507 2.4e-06 55.8 91 39.6
COL.COLO4_14571 Corchorus olitorius HOM05D004233 ORTHO05D003507 2.4e-06 55.8 100 40.0
Prupe.6G271900 Prunus persica HOM05D004233 ORTHO05D003507 2.4e-06 55.8 103 41.7
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 3.1e-06 55.5 100 37.0
TWI77G0758 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 3.1e-06 55.5 97 42.3


User provided reference genes

Program Settings