Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold23G10207 Striga asiatica HOM05D024920 ORTHO05D023790 2.6e-112 408.7 201 100.0
SGA_v2.0_scaffold254G45216 Striga asiatica HOM05D024920 ORTHO05D023790 1.4e-86 323.2 170 93.5
SGA_v2.0_scaffold87G27159 Striga asiatica HOM05D024920 ORTHO05D023790 7.2e-86 320.9 161 98.8
Cc11_g13060 Coffea canephora HOM05D000030 ORTHO05D000009 3.8e-55 218.8 211 57.3
Duzib168G1506 Durio zibethinus HOM05D000030 ORTHO05D000009 3.4e-27 125.9 164 42.1
COL.COLO4_06728 Corchorus olitorius HOM05D000030 ORTHO05D007344 4.9e-26 122.1 132 47.0
COL.COLO4_20952 Corchorus olitorius HOM05D000030 ORTHO05D000009 4.9e-26 122.1 186 37.6
COL.COLO4_24409 Corchorus olitorius HOM05D002632 ORTHO05D002881 4.9e-26 122.1 186 37.6
COL.COLO4_24257 Corchorus olitorius HOM05D000030 ORTHO05D007344 8.4e-26 121.3 186 37.6
COL.COLO4_37582 Corchorus olitorius HOM05D000030 ORTHO05D007344 4.2e-25 119.0 189 36.0
COL.COLO4_22873 Corchorus olitorius HOM05D000030 ORTHO05D000009 5.4e-25 118.6 195 37.4
Duzib068G1361 Durio zibethinus HOM05D000030 ORTHO05D000009 7.1e-25 118.2 164 39.0
COL.COLO4_36328 Corchorus olitorius HOM05D000030 ORTHO05D000009 7.8e-24 114.8 132 44.7
MSTRG.4308 Avicennia marina HOM05D000030 ORTHO05D000009 3.0e-23 112.8 102 57.8
COL.COLO4_35574 Corchorus olitorius HOM05D000030 ORTHO05D007344 3.9e-23 112.5 183 35.5
EL10Ac2g03260 Beta vulgaris HOM05D000030 ORTHO05D000009 5.1e-23 112.1 167 40.7
COL.COLO4_10262 Corchorus olitorius HOM05D000030 ORTHO05D007344 6.6e-23 111.7 184 34.8
COL.COLO4_33382 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.9e-22 110.2 183 35.0
SHI01642 Sapria himalayana HOM05D000030 ORTHO05D007344 2.5e-22 109.8 189 37.6
EL10Ac8g19377 Beta vulgaris HOM05D000030 ORTHO05D000009 2.8e-21 106.3 167 39.5
COL.COLO4_25215 Corchorus olitorius HOM05D000030 ORTHO05D000009 8.1e-21 104.8 127 44.9
SHI32783 Sapria himalayana HOM05D000030 ORTHO05D000009 8.1e-21 104.8 180 36.7
TWI31G1150 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 2.4e-20 103.2 175 34.9
EL10Ac5g11471 Beta vulgaris HOM05D000030 ORTHO05D000009 3.8e-18 95.9 176 36.9
SGA_v2.0_scaffold36G14556 Striga asiatica HOM05D024920 ORTHO05D023790 6.4e-18 95.1 69 65.2
Duzib168G0986 Durio zibethinus HOM05D000030 ORTHO05D000009 4.2e-17 92.4 160 33.8
TWI81G1001 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.7e-16 89.7 147 34.0
TWI73G0883 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 3.5e-16 89.4 147 33.3
Duzib068G0099 Durio zibethinus HOM05D000030 ORTHO05D000009 1.0e-15 87.8 160 33.1
Duzib268G1450 Durio zibethinus HOM05D000030 ORTHO05D000009 5.1e-15 85.5 160 32.5
EL10Ac9g22585 Beta vulgaris HOM05D000030 ORTHO05D007344 1.9e-14 83.6 173 34.7
AUR62015261 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.3e-14 82.8 70 55.7
Cc03_g12020 Coffea canephora HOM05D000030 ORTHO05D000009 4.3e-14 82.4 139 34.5
SHI29485 Sapria himalayana HOM05D000030 ORTHO05D000009 5.6e-14 82.0 156 29.5
Rhsim08G0036500 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.8e-13 79.7 133 34.6
Rhsim05G0167100 Rhododendron simsii HOM05D000030 ORTHO05D007344 3.6e-13 79.3 133 34.6
Duzib187G1152 Durio zibethinus HOM05D000030 ORTHO05D000009 4.8e-13 79.0 55 63.6
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 1.1e-12 77.8 78 48.7
SHI23085 Sapria himalayana HOM05D000030 ORTHO05D007344 1.1e-12 77.8 153 30.7
SHI19978 Sapria himalayana HOM05D000030 ORTHO05D000009 1.8e-12 77.0 175 29.1
Psat4g138840 Pisum sativum HOM05D000030 ORTHO05D007344 3.1e-12 76.3 145 33.8
SHI18041 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-12 76.3 185 26.5
EL10As2g23188 Beta vulgaris HOM05D000030 ORTHO05D000009 5.3e-12 75.5 65 52.3
Duzib235G0836 Durio zibethinus HOM05D000030 ORTHO05D000009 5.3e-12 75.5 44 70.5
SHI16798 Sapria himalayana HOM05D000030 ORTHO05D000009 5.3e-12 75.5 126 32.5
Duzib264G0918 Durio zibethinus HOM05D000030 ORTHO05D007344 6.9e-12 75.1 44 72.7
Rhsim05G0021400 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.9e-12 75.1 156 32.7
SHI00319 Sapria himalayana HOM05D000030 ORTHO05D007344 6.9e-12 75.1 126 31.7
CSS0039788 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.5e-11 73.9 151 30.5
SHI06427 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-11 73.9 59 50.8
SHI36327 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-11 73.9 142 33.1
MSTRG.16911 Avicennia marina HOM05D024920 ORTHO05D023790 2.0e-11 73.6 100 44.0
SHI16790 Sapria himalayana HOM05D000030 ORTHO05D007344 2.6e-11 73.2 126 31.7
TWI79G0114 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.6e-11 73.2 135 36.3
Rhsim01G0169500 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.4e-11 72.8 181 29.8
Aqoxy5G03204 Aquilegia oxysepala HOM05D000030 ORTHO05D013719 5.8e-11 72.0 130 33.8
HanXRQChr09g0250781 Helianthus annuus HOM05D000030 ORTHO05D000009 7.6e-11 71.6 182 30.2
EL10Ac5g11759 Beta vulgaris HOM05D000030 ORTHO05D000009 9.9e-11 71.2 52 53.8
CSS0000746 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.3e-10 70.9 151 30.5
CiPaw.12G065500 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.3e-10 70.9 169 29.0
Psat6g215600 Pisum sativum HOM05D000030 ORTHO05D000009 1.7e-10 70.5 174 28.7
Rhsim05G0020900 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.7e-10 70.5 138 33.3
SHI18871 Sapria himalayana HOM05D000030 ORTHO05D000009 1.7e-10 70.5 142 30.3
TWI56G0896 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 1.7e-10 70.5 149 32.9
CiPaw.14G091800 Carya illinoinensis HOM05D000030 ORTHO05D000009 2.2e-10 70.1 192 27.6
SHI19346 Sapria himalayana HOM05D000030 ORTHO05D000009 2.2e-10 70.1 118 33.9
SHI15418 Sapria himalayana HOM05D000030 ORTHO05D000009 2.9e-10 69.7 126 32.5
CiPaw.04G079600 Carya illinoinensis HOM05D000030 ORTHO05D000009 3.8e-10 69.3 187 29.4
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 4.9e-10 68.9 113 31.0
ECA238G4412 Erigeron canadensis HOM05D000030 ORTHO05D000009 6.4e-10 68.6 178 29.8
CSS0000197 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 8.4e-10 68.2 151 31.8
SHI00423 Sapria himalayana HOM05D000030 ORTHO05D000009 8.4e-10 68.2 181 27.6
CiPaw.03G205900 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.1e-09 67.8 129 31.8
SHI17419 Sapria himalayana HOM05D000030 ORTHO05D000009 1.9e-09 67.0 126 32.5
SHI23529 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-09 66.6 117 35.0
Hma1.2p1_0019F.1_g013840 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.2e-09 66.2 118 33.9
TWI77G0682 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 3.2e-09 66.2 118 35.6
ECA248G2624 Erigeron canadensis HOM05D000030 ORTHO05D000009 4.2e-09 65.9 181 30.4
SHI07448 Sapria himalayana HOM05D000030 ORTHO05D000009 7.1e-09 65.1 110 31.8
MBI18_g17731_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 1.2e-08 64.3 119 32.8
ECA238G0867 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.6e-08 63.9 163 30.1
CSS0034216 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.1e-08 63.5 94 36.2
COL.COLO4_19731 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.7e-08 63.2 127 29.9
TWI60G0371 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.7e-08 63.2 152 30.3
MBI17_g39735_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 4.6e-08 62.4 122 31.1
MBI15_g45662_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 7.9e-08 61.6 115 33.0
Rhsim01G0135900 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.9e-08 61.6 197 24.9
CiPaw.15G111200 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.3e-07 60.8 172 27.9
Nn7g37772 Nelumbo nucifera HOM05D000030 ORTHO05D007344 1.3e-07 60.8 95 36.8
MBI14_g30730_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 3.9e-07 59.3 184 27.7
Nn5g27274 Nelumbo nucifera HOM05D000030 ORTHO05D007344 5.1e-07 58.9 93 38.7
CiPaw.04G154800 Carya illinoinensis HOM05D000030 ORTHO05D000009 6.7e-07 58.5 128 29.7
SHI21552 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-06 57.4 117 32.5
Glyma.03G093900 Glycine max HOM05D000030 ORTHO05D000009 1.9e-06 57.0 137 28.5
MBI15_g00071_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 1.9e-06 57.0 117 29.1
TPR.G22179 Trifolium pratense HOM05D000030 ORTHO05D000009 1.9e-06 57.0 154 29.2
COL.COLO4_28377 Corchorus olitorius HOM05D000455 ORTHO05D000434 2.5e-06 56.6 165 26.7
Gohir.A02G010901 Gossypium hirsutum HOM05D000030 ORTHO05D010590 3.3e-06 56.2 126 27.8
Gorai.005G014600 Gossypium raimondii HOM05D000030 ORTHO05D010590 3.3e-06 56.2 159 26.4
COL.COLO4_20093 Corchorus olitorius HOM05D000030 ORTHO05D000009 4.3e-06 55.8 145 27.6
Hma1.2p1_1093F.1_g256040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.3e-06 55.8 137 27.7
MBI05_g01275_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 4.3e-06 55.8 115 30.4
AUR62037432 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.6e-06 55.5 123 28.5
MBI03_g29275_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 5.6e-06 55.5 129 25.6
MBI15_g07108_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D001260 5.6e-06 55.5 110 29.1
Ah.13g068380 Amaranthus hybridus HOM05D000030 ORTHO05D000009 7.4e-06 55.1 142 26.1
Gohir.A03G053250 Gossypium hirsutum HOM05D000030 ORTHO05D000009 7.4e-06 55.1 145 22.8
Gohir.D04G163966 Gossypium hirsutum HOM05D000030 ORTHO05D000009 7.4e-06 55.1 139 24.5
Lj5g0022570 Lotus japonicus HOM05D000030 ORTHO05D000009 9.6e-06 54.7 118 31.4
Nn1g08489 Nelumbo nucifera HOM05D000030 ORTHO05D000009 9.6e-06 54.7 43 48.8


User provided reference genes

Program Settings