Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold23G10110 Striga asiatica HOM05D017601 ORTHO05D000006 1.4e-198 696.0 352 100.0
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 7.8e-27 125.6 445 27.2
SGA_v2.0_scaffold67G22780 Striga asiatica HOM05D000003 ORTHO05D000006 1.9e-25 120.9 195 34.9
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 1.6e-19 101.3 396 24.2
SGA_v2.0_scaffold23G10140 Striga asiatica HOM05D017601 ORTHO05D401568 2.7e-19 100.5 111 48.6
SGA_v2.0_scaffold38G15038 Striga asiatica HOM05D000003 ORTHO05D000006 8.1e-16 89.0 163 32.5
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 4.4e-14 83.2 325 22.2
SGA_v2.0_scaffold1G00690 Striga asiatica HOM05D000003 ORTHO05D000004 7.5e-14 82.4 196 29.6
SGA_v2.0_scaffold821G53642 Striga asiatica HOM05D000003 ORTHO05D000006 9.8e-14 82.0 81 50.6
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-13 81.6 318 24.5
SGA_v2.0_scaffold16G07515 Striga asiatica HOM05D041003 ORTHO05D000006 3.7e-13 80.1 345 24.9
SGA_v2.0_scaffold272G46371 Striga asiatica HOM05D000003 ORTHO05D000006 8.3e-13 79.0 76 51.3
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 1.1e-12 78.6 81 48.1
SGA_v2.0_scaffold249G44966 Striga asiatica HOM05D042269 ORTHO05D404307 9.2e-12 75.5 53 75.5
SGA_v2.0_scaffold17G07989 Striga asiatica HOM05D000003 ORTHO05D000006 1.6e-11 74.7 68 51.5
SGA_v2.0_scaffold47G17612 Striga asiatica HOM05D000003 ORTHO05D000006 4.6e-11 73.2 91 42.9
SGA_v2.0_scaffold139G35393 Striga asiatica HOM05D000003 ORTHO05D000006 1.0e-10 72.0 69 47.8
Rhsim03G0112800 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.6e-10 69.3 191 26.2
Rhsim08G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.6e-10 69.3 185 29.7
SGA_v2.0_scaffold154G37136 Striga asiatica HOM05D017085 ORTHO05D000006 6.6e-10 69.3 70 45.7
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 6.6e-10 69.3 196 30.1
Rhsim01G0109500 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.6e-10 68.9 186 29.0
SGA_v2.0_scaffold231G43458 Striga asiatica HOM05D000003 ORTHO05D000006 1.9e-09 67.8 67 49.3
SGA_v2.0_scaffold165G38197 Striga asiatica HOM05D000003 ORTHO05D000006 4.3e-09 66.6 399 24.8
SGA_v2.0_scaffold31G12850 Striga asiatica HOM05D000003 ORTHO05D000006 4.3e-09 66.6 70 45.7
SGA_v2.0_scaffold43G16292 Striga asiatica HOM05D000003 ORTHO05D000006 7.3e-09 65.9 76 43.4
SGA_v2.0_scaffold451G51811 Striga asiatica HOM05D058879 ORTHO05D000006 9.5e-09 65.5 69 49.3
SGA_v2.0_scaffold6G03465 Striga asiatica HOM05D000003 ORTHO05D000006 9.5e-09 65.5 75 44.0
SGA_v2.0_scaffold231G43427 Striga asiatica HOM05D018498 ORTHO05D000006 1.6e-08 64.7 76 39.5
SGA_v2.0_scaffold128G34102 Striga asiatica HOM05D000003 ORTHO05D000006 2.8e-08 63.9 95 37.9
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 2.8e-08 63.9 69 46.4
Atru.chr7.1503 Acer truncatum HOM05D000003 ORTHO05D000006 4.7e-08 63.2 69 36.2
SGA_v2.0_scaffold30G12507 Striga asiatica HOM05D011952 ORTHO05D000006 4.7e-08 63.2 69 44.9
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 8.1e-08 62.4 190 26.3
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-07 62.0 67 41.8
SGA_v2.0_scaffold275G46581 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-07 62.0 188 25.0
PSO339G1639 Papaver somniferum HOM05D000003 ORTHO05D000006 1.8e-07 61.2 153 27.5
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-07 61.2 70 47.1
Aa31LG6G3790 Aethionema arabicum HOM05D000003 ORTHO05D000006 2.3e-07 60.8 185 23.8
Aa31LG6G7750 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-07 60.8 185 23.8
Aqoxy5G02484 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.3e-07 60.8 78 35.9
SGA_v2.0_scaffold83G26454 Striga asiatica HOM05D006612 ORTHO05D016790 2.3e-07 60.8 59 45.8
Carub.0005s0877 Capsella rubella HOM05D000003 ORTHO05D000006 3.1e-07 60.5 192 28.1
CANSAT01G2286 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-07 60.1 194 20.6
CANSAT80G2730 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-07 60.1 190 23.2
Medtr2g018005 Medicago truncatula HOM05D000003 ORTHO05D000006 4.0e-07 60.1 193 24.4
BraA07t30522Z Brassica rapa HOM05D000003 ORTHO05D000006 5.2e-07 59.7 187 25.7
SGA_v2.0_scaffold74G24657 Striga asiatica HOM05D000003 ORTHO05D000006 6.8e-07 59.3 72 44.4
TWI80G0001 Tripterygium wilfordii HOM05D000003 ORTHO05D000006 6.8e-07 59.3 81 38.3
Dinv36946 Davidia involucrata HOM05D000003 ORTHO05D000006 8.9e-07 58.9 73 39.7
SGA_v2.0_scaffold231G43406 Striga asiatica HOM05D000024 ORTHO05D000006 8.9e-07 58.9 94 36.2
SGA_v2.0_scaffold83G26411 Striga asiatica HOM05D000003 ORTHO05D000006 8.9e-07 58.9 69 43.5
Medtr1g100687 Medicago truncatula HOM05D000003 ORTHO05D000006 1.2e-06 58.5 91 34.1
PSO339G1461 Papaver somniferum HOM05D000003 ORTHO05D008897 1.2e-06 58.5 152 28.3
Rhsim05G0086500 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.2e-06 58.5 76 38.2
SGA_v2.0_scaffold14G07079 Striga asiatica HOM05D000003 ORTHO05D000006 1.2e-06 58.5 79 38.0
SGA_v2.0_scaffold241G44224 Striga asiatica HOM05D000003 ORTHO05D000006 1.2e-06 58.5 66 43.9
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 1.2e-06 58.5 75 36.0
Manes.09G090221 Manihot esculenta HOM05D000003 ORTHO05D000006 1.5e-06 58.2 190 24.2
RhsimUnG0010200 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-06 58.2 76 38.2
SGA_v2.0_scaffold177G39429 Striga asiatica HOM05D016874 ORTHO05D398971 1.5e-06 58.2 141 28.4
CANSAT54G1425 Cannabis sativa HOM05D000003 ORTHO05D000006 2.0e-06 57.8 185 23.8
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 2.0e-06 57.8 85 37.6
QL05p011573 Quercus lobata HOM05D000003 ORTHO05D000006 2.0e-06 57.8 168 25.6
RhsimUnG0155100 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.0e-06 57.8 74 35.1
SHI23300 Sapria himalayana HOM05D000024 ORTHO05D000007 2.0e-06 57.8 163 27.6
SGA_v2.0_scaffold56G19930 Striga asiatica HOM05D000003 ORTHO05D000006 2.0e-06 57.8 63 46.0
Atru.chr10.150 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-06 57.4 76 34.2
CANSAT80G0814 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-06 57.4 138 24.6
Medtr4g020630 Medicago truncatula HOM05D000003 ORTHO05D000006 2.6e-06 57.4 94 33.0
SGA_v2.0_scaffold99G29516 Striga asiatica HOM05D000003 ORTHO05D000006 2.6e-06 57.4 118 31.4
CANSAT21G0817 Cannabis sativa HOM05D000003 ORTHO05D000006 3.4e-06 57.0 170 24.1
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 3.4e-06 57.0 72 38.9
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 3.4e-06 57.0 74 37.8
Dinv31372 Davidia involucrata HOM05D000003 ORTHO05D000126 3.4e-06 57.0 74 37.8
Atru.chr4.1212 Acer truncatum HOM05D000003 ORTHO05D000006 4.4e-06 56.6 72 31.9
Atru.chr9.814 Acer truncatum HOM05D000003 ORTHO05D000006 4.4e-06 56.6 74 32.4
Atru.ctg24.7 Acer truncatum HOM05D000003 ORTHO05D000006 4.4e-06 56.6 74 32.4
CANSAT35G1852 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-06 56.6 76 38.2
SGA_v2.0_scaffold14G07069 Striga asiatica HOM05D000367 ORTHO05D002159 4.4e-06 56.6 166 25.9
EL10Ac1g02112 Beta vulgaris HOM05D000003 ORTHO05D000006 5.8e-06 56.2 76 35.5
Cc01_g03150 Coffea canephora HOM05D000003 ORTHO05D000006 5.8e-06 56.2 357 21.0
Dinv43698 Davidia involucrata HOM05D000003 ORTHO05D000006 5.8e-06 56.2 72 40.3
SHI54316 Sapria himalayana HOM05D000024 ORTHO05D000006 5.8e-06 56.2 81 37.0
SGA_v2.0_scaffold10G05166 Striga asiatica HOM05D016874 ORTHO05D000126 5.8e-06 56.2 62 38.7
SGA_v2.0_scaffold6G03387 Striga asiatica HOM05D016874 ORTHO05D404320 5.8e-06 56.2 93 33.3
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.6e-06 55.8 190 24.7
Aa31sc153G50 Aethionema arabicum HOM05D000003 ORTHO05D000411 7.6e-06 55.8 212 23.6
Aa31sc480G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.6e-06 55.8 225 22.7
QL05p073923 Quercus lobata HOM05D000003 ORTHO05D000006 7.6e-06 55.8 74 32.4
CANSAT11G2492 Cannabis sativa HOM05D000003 ORTHO05D000004 9.9e-06 55.5 72 36.1
CANSAT56G0006 Cannabis sativa HOM05D000003 ORTHO05D000006 9.9e-06 55.5 190 25.3
CANSAT64G0941 Cannabis sativa HOM05D000003 ORTHO05D000006 9.9e-06 55.5 95 31.6
CANSAT64G2324 Cannabis sativa HOM05D000003 ORTHO05D000004 9.9e-06 55.5 193 22.8
Gohir.A09G031322 Gossypium hirsutum HOM05D000003 ORTHO05D000006 9.9e-06 55.5 185 22.7
Manes.18G036550 Manihot esculenta HOM05D000003 ORTHO05D000006 9.9e-06 55.5 196 23.0
PSO384G1816 Papaver somniferum HOM05D000003 ORTHO05D000006 9.9e-06 55.5 71 32.4
Potri.004G117750 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.9e-06 55.5 70 35.7
Rhsim01G0161700 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.9e-06 55.5 76 35.5
SHI33988 Sapria himalayana HOM05D000024 ORTHO05D000007 9.9e-06 55.5 82 34.1


User provided reference genes

Program Settings