Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.3e-216 756.1 395 100.0
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 1.7e-192 676.0 416 86.8
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 5.0e-184 647.9 388 88.4
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 1.6e-177 626.3 369 89.4
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 2.7e-177 625.5 370 88.4
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.4e-173 613.2 387 83.7
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 8.4e-171 604.0 387 79.6
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 4.0e-165 585.1 390 78.7
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 6.9e-165 584.3 372 83.3
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 1.2e-164 583.6 380 81.3
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 5.8e-164 581.3 386 79.5
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 1.7e-163 579.7 386 80.1
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 3.8e-163 578.6 387 79.1
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 3.8e-163 578.6 374 82.1
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 6.4e-163 577.8 383 79.1
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.4e-163 577.8 383 79.1
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 8.4e-163 577.4 376 81.4
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.4e-162 576.6 376 80.9
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 3.2e-162 575.5 370 81.4
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.1e-162 574.3 376 80.3
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 7.1e-162 574.3 360 83.1
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.2e-161 573.5 376 80.3
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 1.6e-161 573.2 383 78.1
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.7e-161 572.4 391 79.0
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.5e-161 572.0 389 74.3
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 3.5e-161 572.0 375 76.5
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 6.0e-161 571.2 387 74.9
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.3e-160 570.1 382 78.5
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.7e-160 569.7 357 84.0
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.3e-160 569.3 382 78.5
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.9e-160 568.5 367 81.2
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.9e-160 568.5 382 78.5
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 5.1e-160 568.2 375 79.2
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 6.6e-160 567.8 370 78.1
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 6.6e-160 567.8 387 74.9
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 8.7e-160 567.4 375 76.3
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 8.7e-160 567.4 387 77.0
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 2.5e-159 565.8 381 75.9
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 3.3e-159 565.5 381 79.3
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 3.3e-159 565.5 381 79.3
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 4.3e-159 565.1 389 73.5
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 5.6e-159 564.7 380 77.4
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 5.6e-159 564.7 363 77.1
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.3e-158 563.5 384 78.4
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 1.3e-158 563.5 388 73.2
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.3e-158 563.5 389 73.0
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.6e-158 563.1 357 82.9
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 6.2e-158 561.2 384 77.3
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 1.4e-157 560.1 368 79.6
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 1.4e-157 560.1 385 77.4
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.4e-157 560.1 388 73.2
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 1.4e-157 560.1 361 79.8
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.4e-157 560.1 361 80.1
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 1.8e-157 559.7 352 79.5
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 1.8e-157 559.7 352 79.5
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 3.1e-157 558.9 355 82.3
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 4.0e-157 558.5 389 72.8
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 5.3e-157 558.1 389 72.5
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 1.5e-156 556.6 369 75.1
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 9.9e-156 553.9 359 81.1
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 1.3e-155 553.5 374 75.9
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 1.3e-155 553.5 374 79.4
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 3.8e-155 552.0 411 69.3
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 3.8e-155 552.0 353 81.9
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 4.9e-155 551.6 368 79.6
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 4.9e-155 551.6 365 78.4
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 8.4e-155 550.8 367 78.7
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 8.4e-155 550.8 383 76.8
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 8.4e-155 550.8 387 76.5
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 8.4e-155 550.8 359 77.7
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 8.4e-155 550.8 368 79.6
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 1.9e-154 549.7 375 76.0
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.9e-154 549.7 345 78.6
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.9e-154 549.7 366 78.4
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 4.2e-154 548.5 358 79.9
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.6e-153 546.6 376 78.5
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 2.1e-153 546.2 355 77.2
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.7e-153 545.8 386 74.1
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 4.6e-153 545.0 368 79.1
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 4.6e-153 545.0 368 79.1
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.0e-152 543.9 369 76.4
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 1.3e-152 543.5 368 74.5
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 1.8e-152 543.1 385 76.1
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 3.9e-152 542.0 382 75.7
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 8.7e-152 540.8 390 75.9
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 8.7e-152 540.8 383 72.8
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.1e-151 540.4 369 77.0
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.9e-151 539.7 369 76.7
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 3.3e-151 538.9 372 73.7
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 3.3e-151 538.9 329 83.3
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 4.3e-151 538.5 309 84.5
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.3e-150 537.0 369 76.7
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 8.1e-150 534.3 358 74.0
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.1e-149 533.9 383 74.7
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 2.4e-149 532.7 368 77.7
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 3.1e-149 532.3 306 84.0
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.2e-148 530.4 351 77.5
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 2.0e-148 529.6 376 76.6
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 3.4e-148 528.9 407 72.2
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 4.5e-148 528.5 307 83.1
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 5.8e-148 528.1 368 77.2
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 5.8e-148 528.1 368 77.2
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 7.6e-148 527.7 313 81.8
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 3.8e-147 525.4 306 82.7
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.1e-146 523.9 332 76.5
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 1.9e-146 523.1 387 73.9
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 3.2e-146 522.3 361 72.3
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 5.5e-146 521.5 370 75.7
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 5.5e-146 521.5 365 72.3
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 9.3e-146 520.8 363 72.7
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 2.1e-145 519.6 479 62.8
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 3.5e-145 518.8 368 70.9
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 4.6e-145 518.5 361 77.0
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 6.0e-145 518.1 309 80.6
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 1.8e-144 516.5 360 73.6
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 5.1e-144 515.0 323 77.7
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 8.7e-144 514.2 384 69.0
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 1.9e-143 513.1 381 73.8
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.3e-142 510.4 349 72.8
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.1e-141 507.3 387 71.8
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 2.0e-140 503.1 325 76.3
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 1.3e-139 500.4 313 76.4
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 1.7e-139 500.0 363 67.8
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 1.2e-137 493.8 387 68.0
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 2.7e-137 492.7 350 70.6
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 1.0e-136 490.7 301 79.1
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.2e-134 483.0 302 83.8
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 2.4e-133 479.6 269 85.1
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 2.4e-133 479.6 297 85.5
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 4.5e-132 475.3 384 69.3
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 5.0e-131 471.9 298 74.2
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 5.5e-130 468.4 339 73.5
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 3.6e-129 465.7 353 73.1
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 3.1e-125 452.6 361 61.5
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 1.5e-124 450.3 275 78.5
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 4.5e-124 448.7 312 73.4
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 2.2e-123 446.4 400 62.5
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.8e-120 436.8 358 65.6
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 4.4e-119 432.2 266 79.7
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.7e-118 430.3 298 67.4
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 8.2e-118 427.9 356 59.6
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.5e-116 423.7 351 58.7
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 5.9e-116 421.8 370 60.5
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 3.8e-115 419.1 309 64.4
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 3.0e-112 409.5 303 65.0
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 6.3e-110 401.7 375 63.2
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 5.5e-106 388.7 221 85.5
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 9.4e-106 387.9 416 53.4
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 6.1e-105 385.2 242 78.9
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 2.8e-94 349.7 359 53.8
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.0e-87 327.0 239 64.9
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 1.6e-81 307.4 241 67.6
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 3.3e-66 256.5 150 82.0
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 3.6e-65 253.1 303 50.8
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 1.1e-61 241.5 169 77.5
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 2.5e-58 230.3 197 58.4
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 8.7e-43 178.7 164 56.7
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.3e-30 138.3 285 34.0
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 1.3e-30 138.3 89 75.3
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 4.3e-26 123.2 106 58.5
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 7.4e-26 122.5 357 29.1
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 4.5e-23 113.2 297 29.3
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 1.3e-22 111.7 65 78.5
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 8.4e-22 109.0 234 35.5
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 3.0e-19 100.5 91 78.0
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 6.7e-19 99.4 90 78.9
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.8e-16 91.3 80 61.2
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 3.1e-16 90.5 59 72.9
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.5e-15 88.2 377 25.5
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 2.0e-15 87.8 61 68.9
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 2.0e-15 87.8 61 68.9
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 4.5e-15 86.7 61 68.9
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 8.8e-11 72.4 108 34.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.1e-08 65.5 33 84.8
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 6.9e-08 62.8 72 75.0
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.2e-07 62.0 41 73.2
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 2.0e-07 61.2 41 70.7
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 2.6e-07 60.8 38 76.3
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 4.5e-07 60.1 35 77.1
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 2.9e-06 57.4 50 62.0


User provided reference genes

Program Settings