Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 7.0e-284 979.9 493 100.0
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 4.1e-159 565.5 501 60.1
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 8.9e-154 547.7 502 59.4
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 1.0e-149 534.3 484 57.9
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 4.4e-145 518.8 507 55.4
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 3.0e-141 506.1 444 58.8
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 9.5e-140 501.1 506 52.4
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 3.6e-139 499.2 506 52.6
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.1e-138 497.7 499 54.5
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 1.5e-137 493.8 505 53.5
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.7e-136 490.3 506 52.4
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 8.3e-136 488.0 497 53.3
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.1e-135 487.6 506 52.6
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.1e-135 487.6 500 54.6
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 7.1e-135 485.0 499 52.5
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 6.6e-133 478.4 504 51.2
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 6.6e-133 478.4 492 53.7
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 1.6e-131 473.8 517 50.1
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 3.6e-131 472.6 509 52.5
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 1.4e-130 470.7 506 50.4
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 4.0e-130 469.2 503 52.9
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 6.8e-130 468.4 507 50.7
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 1.5e-129 467.2 500 50.8
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 4.4e-129 465.7 499 50.1
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 5.8e-129 465.3 501 49.5
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 1.4e-127 460.7 509 48.3
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 9.2e-127 458.0 507 52.5
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 1.2e-126 457.6 496 52.0
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 3.5e-126 456.1 503 52.1
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 6.0e-126 455.3 508 52.0
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.3e-125 454.1 486 49.6
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.9e-125 452.6 486 49.4
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 1.1e-124 451.1 506 47.2
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 7.3e-124 448.4 516 49.0
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 1.6e-123 447.2 500 49.8
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 2.8e-123 446.4 511 50.5
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 3.1e-122 443.0 506 48.8
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 9.0e-122 441.4 518 48.8
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 7.6e-121 438.3 498 50.6
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 1.9e-119 433.7 508 47.8
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 9.3e-119 431.4 505 48.1
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 7.8e-118 428.3 500 48.4
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 6.6e-117 425.2 505 47.9
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 1.6e-115 420.6 509 46.0
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 6.2e-115 418.7 431 53.6
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 1.8e-114 417.2 498 46.8
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 1.2e-113 414.5 520 46.2
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 9.9e-113 411.4 517 45.3
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 3.8e-112 409.5 506 46.4
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 1.1e-111 407.9 424 51.4
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 1.2e-110 404.4 517 46.2
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 1.6e-110 404.1 506 46.8
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 2.7e-110 403.3 500 47.8
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 1.8e-109 400.6 506 46.2
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 1.8e-109 400.6 506 46.6
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 2.3e-109 400.2 506 46.6
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 3.0e-109 399.8 503 46.7
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 5.1e-109 399.1 508 45.9
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 8.7e-109 398.3 504 47.0
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.7e-107 392.9 413 50.4
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.4e-106 390.2 413 50.1
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 3.1e-106 389.8 509 45.6
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 6.7e-101 372.1 418 49.0
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 9.6e-100 368.2 427 48.0
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 1.8e-98 364.0 502 42.6
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 3.1e-98 363.2 416 48.1
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 2.6e-97 360.1 408 47.8
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 1.5e-92 344.4 418 45.9
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 2.5e-92 343.6 423 44.9
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 1.1e-90 338.2 508 41.1
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 6.5e-80 302.4 303 50.2
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 1.1e-76 291.6 363 49.6
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 5.7e-76 289.3 545 36.5
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 3.2e-71 273.5 236 58.5
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 2.2e-64 250.8 492 34.6
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 3.8e-64 250.0 564 31.9
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 3.2e-63 246.9 459 34.6
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 7.2e-63 245.7 508 33.9
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 7.5e-36 156.0 161 53.4
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 9.2e-34 149.1 479 26.7
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 8.6e-24 115.9 447 25.3
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 2.1e-22 111.3 117 49.6
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 4.0e-13 80.5 508 24.6
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 4.0e-13 80.5 247 27.9


User provided reference genes

Program Settings