Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold238G43969 Striga asiatica HOM05D004288 ORTHO05D004997 3.8e-87 324.7 155 100.0
SalBow7G4748 Salvia bowleyana HOM05D004288 ORTHO05D004997 1.2e-16 90.5 133 41.4
Migut.C00495 Erythranthe guttata HOM05D004288 ORTHO05D004997 2.7e-16 89.4 118 47.5
Nitab4.5_0000569g0070 Nicotiana tabacum HOM05D004288 ORTHO05D004997 3.9e-15 85.5 125 41.6
Nitab4.5_0014410g0020 Nicotiana tabacum HOM05D004288 ORTHO05D004997 3.9e-15 85.5 98 46.9
Oeu057368.1 Olea europaea HOM05D004288 ORTHO05D004997 1.3e-13 80.5 113 46.0
Actinidia22683 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.2e-13 79.7 117 42.7
MSTRG.1030 Avicennia marina HOM05D004288 ORTHO05D004997 3.7e-13 79.0 104 45.2
Peaxi162Scf00081g01322 Petunia axillaris HOM05D004288 ORTHO05D004997 5.3e-12 75.1 111 43.2
Cc10_g05620 Coffea canephora HOM05D004288 ORTHO05D004997 1.2e-11 73.9 116 40.5
Dinv44970 Davidia involucrata HOM05D004288 ORTHO05D004997 1.2e-11 73.9 110 40.9
Atru.chr13.813 Acer truncatum HOM05D004288 ORTHO05D004997 2.0e-11 73.2 110 42.7
Actinidia10187 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.0e-11 73.2 114 42.1
Hma1.2p1_0819F.1_g223820 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 4.5e-11 72.0 103 40.8
SalBow6G1935 Salvia bowleyana HOM05D004288 ORTHO05D004997 4.5e-11 72.0 116 42.2
SalBow8G0960 Salvia bowleyana HOM05D004288 ORTHO05D004997 4.5e-11 72.0 116 42.2
MD15G1071700 Malus domestica HOM05D004288 ORTHO05D004997 1.0e-10 70.9 106 42.5
Gohir.A05G208400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.3e-10 70.5 109 42.2
Solyc12g088410.3 Solanum lycopersicum HOM05D004288 ORTHO05D004997 1.3e-10 70.5 78 44.9
vmacro21447 Vaccinium macrocarpon HOM05D004288 ORTHO05D004997 1.7e-10 70.1 44 68.2
Rhsim07G0221200 Rhododendron simsii HOM05D004288 ORTHO05D004997 2.9e-10 69.3 45 64.4
Solyc04g078010.4 Solanum lycopersicum HOM05D004288 ORTHO05D004997 2.9e-10 69.3 103 41.7
PGSC0003DMG400021529 Solanum tuberosum HOM05D004288 ORTHO05D004997 2.9e-10 69.3 99 41.4
CANSAT25G2350 Cannabis sativa HOM05D004288 ORTHO05D004997 3.8e-10 68.9 86 41.9
Thecc.08G091000 Theobroma cacao HOM05D004288 ORTHO05D004997 3.8e-10 68.9 110 39.1
MSTRG.22227 Avicennia marina HOM05D004288 ORTHO05D004997 5.0e-10 68.6 113 43.4
Rhsim06G0060800 Rhododendron simsii HOM05D004288 ORTHO05D004997 5.0e-10 68.6 103 40.8
CiPaw.08G049000 Carya illinoinensis HOM05D004288 ORTHO05D004997 6.5e-10 68.2 113 42.5
Sopen04g031610 Solanum pennellii HOM05D004288 ORTHO05D004997 6.5e-10 68.2 83 45.8
GSVIVG01009362001 Vitis vinifera HOM05D004288 ORTHO05D004997 6.5e-10 68.2 44 65.9
MBI16_g22811_MAGBIO Magnolia biondii HOM05D004288 ORTHO05D004997 8.5e-10 67.8 115 35.7
Gohir.D05G211900 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.1e-09 67.4 108 40.7
Gorai.009G218500 Gossypium raimondii HOM05D004288 ORTHO05D004997 1.1e-09 67.4 108 40.7
Sopen12g030390 Solanum pennellii HOM05D004288 ORTHO05D004997 1.1e-09 67.4 74 44.6
Duzib116G0008 Durio zibethinus HOM05D004288 ORTHO05D004997 1.4e-09 67.0 110 40.0
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 1.4e-09 67.0 118 38.1
PGSC0003DMG401011559 Solanum tuberosum HOM05D004288 ORTHO05D004997 1.4e-09 67.0 37 73.0
Cfa013675 Carpinus fangiana HOM05D004288 ORTHO05D004997 1.9e-09 66.6 116 38.8
Nitab4.5_0000934g0110 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.9e-09 66.6 112 41.1
Prupe.1G424700 Prunus persica HOM05D004288 ORTHO05D004997 1.9e-09 66.6 109 43.1
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 2.5e-09 66.2 115 39.1
Aqoxy6G02704 Aquilegia oxysepala HOM05D004288 ORTHO05D004997 3.2e-09 65.9 102 39.2
Cpa.g.sc21.102 Carica papaya HOM05D004288 ORTHO05D004997 3.2e-09 65.9 37 70.3
TWI56G0562 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 3.2e-09 65.9 39 66.7
Hma1.2p1_0210F.1_g089620 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 4.2e-09 65.5 44 63.6
Nitab4.5_0011511g0010 Nicotiana tabacum HOM05D004288 ORTHO05D004997 4.2e-09 65.5 115 38.3
CSS0041913 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 5.5e-09 65.1 117 39.3
CiPaw.07G176600 Carya illinoinensis HOM05D004288 ORTHO05D004997 5.5e-09 65.1 43 65.1
CsaV3_4G034910 Cucumis sativus L. HOM05D004288 ORTHO05D003449 5.5e-09 65.1 42 61.9
Eucgr.F00116 Eucalyptus grandis HOM05D004288 ORTHO05D004997 5.5e-09 65.1 109 40.4
CAN.G107.3 Capsicum annuum HOM05D004288 ORTHO05D004997 7.2e-09 64.7 37 70.3
ClCG05G020480 Citrullus lanatus HOM05D004288 ORTHO05D004997 7.2e-09 64.7 78 42.3
Duzib041G0778 Durio zibethinus HOM05D004288 ORTHO05D004997 7.2e-09 64.7 43 67.4
Peaxi162Scf00160g00120 Petunia axillaris HOM05D004288 ORTHO05D004997 7.2e-09 64.7 37 70.3
THA.LOC104825767 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 7.2e-09 64.7 48 56.2
unitig_8.g4880 Utricularia gibba HOM05D004288 ORTHO05D004997 7.2e-09 64.7 40 65.0
Actinidia38098 Actinidia chinensis HOM05D004288 ORTHO05D004997 9.4e-09 64.3 44 61.4
FvH4_2g33280 Fragaria vesca HOM05D004288 ORTHO05D004997 9.4e-09 64.3 39 69.2
FAN24G2538 Fragaria x ananassa HOM05D004288 ORTHO05D004997 9.4e-09 64.3 39 69.2
FAN27G1232 Fragaria x ananassa HOM05D004288 ORTHO05D004997 9.4e-09 64.3 39 69.2
Sc02g0007800 Simmondsia chinensis HOM05D003189 ORTHO05D003449 1.2e-08 63.9 40 67.5
CiPaw.08G113500 Carya illinoinensis HOM05D004288 ORTHO05D004997 1.6e-08 63.5 83 44.6
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 2.1e-08 63.2 39 71.8
Ah.05g167180 Amaranthus hybridus HOM05D004288 ORTHO05D004997 2.7e-08 62.8 42 59.5
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 2.7e-08 62.8 46 60.9
CANSAT54G1812 Cannabis sativa HOM05D004288 ORTHO05D004997 3.6e-08 62.4 87 44.8
DCAR_012811 Daucus carota HOM05D004288 ORTHO05D004997 3.6e-08 62.4 41 61.0
Lsat_1_v5_gn_6_112441 Lactuca sativa HOM05D004288 ORTHO05D004997 3.6e-08 62.4 42 64.3
Hund14391 Selenicereus undatus HOM05D004288 ORTHO05D004997 3.6e-08 62.4 41 65.9
EL10As7g23804 Beta vulgaris HOM05D004288 ORTHO05D004997 4.6e-08 62.0 41 61.0
Haze_22316 Corylus avellana HOM05D004288 ORTHO05D004997 4.6e-08 62.0 109 38.5
Oeu059079.1 Olea europaea HOM05D004288 ORTHO05D004997 4.6e-08 62.0 116 36.2
COL.COLO4_28524 Corchorus olitorius HOM05D004288 ORTHO05D004997 6.1e-08 61.6 35 74.3
Migut.N02769 Erythranthe guttata HOM05D004288 ORTHO05D004997 6.1e-08 61.6 39 64.1
FAN20G2816 Fragaria x ananassa HOM05D004288 ORTHO05D004997 7.9e-08 61.2 39 66.7
HanXRQChr01g0027971 Helianthus annuus HOM05D004288 ORTHO05D004997 7.9e-08 61.2 99 41.4
Sabra14G0011500 Salix brachista HOM05D004288 ORTHO05D004997 7.9e-08 61.2 114 39.5
FAN15G0972 Fragaria x ananassa HOM05D004288 ORTHO05D004997 1.0e-07 60.8 39 66.7
Gohir.A06G023200 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.0e-07 60.8 96 40.6
RcHm_v2.0_Chr6g0309361 Rosa chinensis HOM05D004288 ORTHO05D004997 1.0e-07 60.8 37 64.9
CSS0005181 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 1.4e-07 60.5 80 42.5
TAR628G0045 Trochodendron aralioides HOM05D004288 ORTHO05D004997 1.4e-07 60.5 114 36.8
TAR636G2516 Trochodendron aralioides HOM05D004288 ORTHO05D004997 1.4e-07 60.5 75 44.0
Zm00001eb007460 Zea mays HOM05D004288 ORTHO05D004997 1.4e-07 60.5 37 64.9
ClCG05G020460 Citrullus lanatus HOM05D004288 ORTHO05D004997 1.8e-07 60.1 80 42.5
ECA232G2356 Erigeron canadensis HOM05D004288 ORTHO05D004997 1.8e-07 60.1 110 39.1
MELO3C032376.2 Cucumis melo HOM05D004288 ORTHO05D004997 2.3e-07 59.7 41 58.5
MD08G1087000 Malus domestica HOM05D004288 ORTHO05D004997 2.3e-07 59.7 38 63.2
Os03g0206201 Oryza sativa ssp. japonica HOM05D004288 ORTHO05D004997 2.3e-07 59.7 39 59.0
Phvul.001G026400 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 3.0e-07 59.3 113 38.1
MELO3C016806.2 Cucumis melo HOM05D004288 ORTHO05D004997 3.9e-07 58.9 44 59.1
Gorai.010G024900 Gossypium raimondii HOM05D004288 ORTHO05D004997 3.9e-07 58.9 95 41.1
Manes.18G045000 Manihot esculenta HOM05D004288 ORTHO05D004997 3.9e-07 58.9 115 34.8
PSO541G1266 Papaver somniferum HOM05D004288 ORTHO05D004997 3.9e-07 58.9 37 64.9
Gohir.D06G020400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 5.1e-07 58.5 96 40.6
Sed0012219 Sechium edule HOM05D004288 ORTHO05D004997 5.1e-07 58.5 42 59.5
SGA_v2.0_scaffold14G06935 Striga asiatica HOM05D004288 ORTHO05D004997 5.1e-07 58.5 112 34.8
CiPaw.13G085100 Carya illinoinensis HOM05D004288 ORTHO05D004997 6.7e-07 58.2 56 50.0
VMungo0647G1736 Vigna mungo HOM05D004288 ORTHO05D004997 6.7e-07 58.2 77 42.9
HanXRQChr09g0266571 Helianthus annuus HOM05D004288 ORTHO05D004997 8.8e-07 57.8 107 36.4
Lsat_1_v5_gn_4_130821 Lactuca sativa HOM05D004288 ORTHO05D004997 8.8e-07 57.8 47 57.4
QL12p037641 Quercus lobata HOM05D004288 ORTHO05D004997 8.8e-07 57.8 48 54.2
Sed0005367 Sechium edule HOM05D004288 ORTHO05D004997 8.8e-07 57.8 42 57.1
CDE06G1799 Ceratophyllum demersum HOM05D004288 ORTHO05D004997 1.1e-06 57.4 45 53.3
Glyma.14G087800 Glycine max HOM05D004288 ORTHO05D004997 1.5e-06 57.0 77 49.4
CiPaw.04G152800 Carya illinoinensis HOM05D004288 ORTHO05D004997 2.0e-06 56.6 56 50.0
HanXRQChr11g0341661 Helianthus annuus HOM05D004288 ORTHO05D004997 2.0e-06 56.6 35 71.4
PSO675G1665 Papaver somniferum HOM05D004288 ORTHO05D004997 2.0e-06 56.6 33 66.7
THA.LOC104801605 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 2.0e-06 56.6 42 59.5
VMungo0647G1883 Vigna mungo HOM05D004288 ORTHO05D004997 2.0e-06 56.6 110 37.3
CDE04G1463 Ceratophyllum demersum HOM05D004288 ORTHO05D004997 2.5e-06 56.2 36 63.9
Glyma.17G236500 Glycine max HOM05D004288 ORTHO05D004997 3.3e-06 55.8 78 48.7
Medtr1g018470 Medicago truncatula HOM05D004288 ORTHO05D004997 3.3e-06 55.8 107 38.3
Medtr1g418505 Medicago truncatula HOM05D004288 ORTHO05D004997 3.3e-06 55.8 107 38.3
Aqoxy5G00895 Aquilegia oxysepala HOM05D003189 ORTHO05D003449 4.3e-06 55.5 43 58.1
Carub.0006s0080 Capsella rubella HOM05D004288 ORTHO05D004997 4.3e-06 55.5 52 51.9
Sed0026714 Sechium edule HOM05D004288 ORTHO05D004997 4.3e-06 55.5 44 56.8
TAR381G1169 Trochodendron aralioides HOM05D004288 ORTHO05D004997 4.3e-06 55.5 71 42.3
GSVIVG01037855001 Vitis vinifera HOM05D004288 ORTHO05D004997 5.7e-06 55.1 44 52.3
AT5G01075 Arabidopsis thaliana HOM05D004288 ORTHO05D004997 7.4e-06 54.7 38 65.8
Phvul.001G026500 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 9.7e-06 54.3 112 37.5


User provided reference genes

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