Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 4.7e-59 231.1 126 100.0
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 7.1e-23 110.9 72 91.7
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 1.0e-21 107.1 72 79.2
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 2.8e-19 99.0 72 77.8
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 1.8e-18 96.3 72 72.2
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 2.4e-18 95.9 72 70.8
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 3.1e-18 95.5 74 67.6
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 3.1e-18 95.5 74 68.9
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 4.0e-18 95.1 72 69.4
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 6.9e-18 94.4 72 72.2
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 2.0e-17 92.8 72 70.8
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 2.6e-17 92.4 72 70.8
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 3.4e-17 92.0 72 70.8
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.4e-17 92.0 72 65.3
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 3.4e-17 92.0 72 68.1
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 7.6e-17 90.9 73 68.5
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 7.6e-17 90.9 73 68.5
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 9.9e-17 90.5 72 70.8
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 1.7e-16 89.7 72 65.3
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 2.2e-16 89.4 71 74.6
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 4.9e-16 88.2 70 77.1
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 4.9e-16 88.2 70 72.9
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 1.1e-15 87.0 72 62.5
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 1.4e-15 86.7 72 65.3
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 2.4e-15 85.9 84 63.1
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 2.4e-15 85.9 68 70.6
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 2.4e-15 85.9 72 63.9
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 3.2e-15 85.5 72 63.9
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 1.6e-14 83.2 72 61.1
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 1.6e-14 83.2 73 64.4
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 1.6e-14 83.2 70 65.7
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 2.7e-14 82.4 73 64.4
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 4.6e-14 81.6 72 62.5
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 6.0e-14 81.3 76 60.5
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 6.0e-14 81.3 76 61.8
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 6.0e-14 81.3 76 61.8
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 6.0e-14 81.3 76 60.5
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 7.9e-14 80.9 72 61.1
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 7.9e-14 80.9 70 62.9
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 1.0e-13 80.5 72 66.7
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 1.3e-13 80.1 104 54.8
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 2.3e-13 79.3 72 62.5
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 2.3e-13 79.3 86 53.5
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 2.3e-13 79.3 70 61.4
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 5.1e-13 78.2 72 58.3
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 6.6e-13 77.8 70 60.0
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 6.6e-13 77.8 70 60.0
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 6.6e-13 77.8 70 60.0
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 8.7e-13 77.4 70 64.3
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 1.9e-12 76.3 73 61.6
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 1.9e-12 76.3 70 60.0
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 2.5e-12 75.9 70 60.0
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 9.6e-12 73.9 72 66.7
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 1.3e-11 73.6 72 61.1
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 2.1e-11 72.8 69 63.8
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 2.1e-11 72.8 73 58.9
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 2.1e-11 72.8 70 62.9
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 2.8e-11 72.4 72 65.3
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 3.6e-11 72.0 69 62.3
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 3.6e-11 72.0 87 50.6
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 6.2e-11 71.2 71 57.7
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 8.1e-11 70.9 70 61.4
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 1.1e-10 70.5 85 50.6
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 1.4e-10 70.1 72 54.2
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 2.4e-10 69.3 84 58.3
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 3.1e-10 68.9 72 52.8
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 5.3e-10 68.2 72 52.8
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 1.2e-09 67.0 72 52.8
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 7.6e-09 64.3 77 53.2
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 7.6e-09 64.3 87 49.4
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 2.2e-08 62.8 72 59.7
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 6.0e-06 54.7 67 53.7


User provided reference genes

Program Settings