Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold238G43953 Striga asiatica HOM05D001099 ORTHO05D405309 2.2e-105 385.6 185 100.0
SGA_v2.0_scaffold2G01204 Striga asiatica HOM05D001099 ORTHO05D000958 1.5e-77 293.1 153 94.1
SGA_v2.0_scaffold2G01178 Striga asiatica HOM05D001099 ORTHO05D000958 1.7e-20 103.6 170 38.2
SGA_v2.0_scaffold2G01177 Striga asiatica HOM05D001099 ORTHO05D008869 1.8e-14 83.6 97 43.3
Migut.F01183 Erythranthe guttata HOM05D001099 ORTHO05D000958 2.0e-13 80.1 153 38.6
Oeu035950.1 Olea europaea HOM05D001099 ORTHO05D000958 2.6e-13 79.7 150 36.7
SGA_v2.0_scaffold136G34998 Striga asiatica HOM05D001099 ORTHO05D000958 3.4e-13 79.3 145 40.0
MSTRG.129 Avicennia marina HOM05D001099 ORTHO05D000958 4.4e-13 79.0 151 35.8
SalBow2G2546 Salvia bowleyana HOM05D001099 ORTHO05D000958 1.7e-12 77.0 116 40.5
unitig_736.g22948 Utricularia gibba HOM05D001099 ORTHO05D000958 4.8e-12 75.5 145 35.9
Aqoxy5G03898 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 6.3e-12 75.1 103 40.8
MSTRG.27200 Avicennia marina HOM05D001099 ORTHO05D000958 8.3e-12 74.7 116 41.4
Atru.chr9.1326 Acer truncatum HOM05D001099 ORTHO05D000958 1.1e-11 74.3 117 37.6
Lj8P261T47 Lonicera japonica HOM05D001099 ORTHO05D000958 2.4e-11 73.2 126 37.3
Migut.C00065 Erythranthe guttata HOM05D001099 ORTHO05D000958 4.1e-11 72.4 154 35.1
Cc02_g04250 Coffea canephora HOM05D001099 ORTHO05D000958 5.4e-11 72.0 139 36.0
Migut.F00477 Erythranthe guttata HOM05D001099 ORTHO05D000958 5.4e-11 72.0 153 34.6
MSTRG.8412 Avicennia marina HOM05D001099 ORTHO05D000958 7.0e-11 71.6 155 32.9
Dinv28574 Davidia involucrata HOM05D001099 ORTHO05D000958 1.2e-10 70.9 103 40.8
Migut.F00478 Erythranthe guttata HOM05D001099 ORTHO05D000958 1.2e-10 70.9 112 41.1
FvH4_7g27540 Fragaria vesca HOM05D001099 ORTHO05D000958 1.2e-10 70.9 136 36.8
FAN06G1895 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.2e-10 70.9 136 36.8
FAN06G3855 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.2e-10 70.9 136 36.8
FAN10G0801 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.2e-10 70.9 136 36.8
Prupe.5G071200 Prunus persica HOM05D001099 ORTHO05D000958 1.2e-10 70.9 158 32.9
RcHm_v2.0_Chr1g0374411 Rosa chinensis HOM05D001099 ORTHO05D000958 1.2e-10 70.9 115 37.4
Os02g0758000 Oryza sativa ssp. japonica HOM05D001099 ORTHO05D000958 1.6e-10 70.5 116 39.7
FAN08G3558 Fragaria x ananassa HOM05D001099 ORTHO05D000958 2.7e-10 69.7 126 36.5
FAN04G1733 Fragaria x ananassa HOM05D001099 ORTHO05D000958 3.5e-10 69.3 126 35.7
Gohir.A08G170900 Gossypium hirsutum HOM05D001099 ORTHO05D000958 3.5e-10 69.3 116 36.2
Zm00001eb193940 Zea mays HOM05D001099 ORTHO05D000958 3.5e-10 69.3 106 40.6
Cc08_g12550 Coffea canephora HOM05D001099 ORTHO05D000958 4.5e-10 68.9 110 36.4
Migut.C00062 Erythranthe guttata HOM05D001099 ORTHO05D000958 4.5e-10 68.9 109 39.4
FAN13G2298 Fragaria x ananassa HOM05D001099 ORTHO05D000958 4.5e-10 68.9 103 36.9
Actinidia14437 Actinidia chinensis HOM05D001099 ORTHO05D000958 5.9e-10 68.6 103 35.9
Nitab4.5_0000312g0130 Nicotiana tabacum HOM05D001099 ORTHO05D000958 5.9e-10 68.6 103 38.8
CDE05G1533 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 7.7e-10 68.2 104 40.4
Migut.C00061 Erythranthe guttata HOM05D001099 ORTHO05D000958 7.7e-10 68.2 137 35.8
Peaxi162Scf00002g00191 Petunia axillaris HOM05D001099 ORTHO05D000958 7.7e-10 68.2 102 37.3
FvH4_5g18720 Fragaria vesca HOM05D001099 ORTHO05D000958 1.0e-09 67.8 126 34.9
FAN18G3089 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.0e-09 67.8 126 34.9
vmacro06798 Vaccinium macrocarpon HOM05D001099 ORTHO05D000958 1.0e-09 67.8 104 38.5
CAN.G1367.2 Capsicum annuum HOM05D001099 ORTHO05D000958 1.3e-09 67.4 126 37.3
Lj8P261T44 Lonicera japonica HOM05D001099 ORTHO05D000958 1.3e-09 67.4 118 39.0
Sp6g13600 Schrenkiella parvula HOM05D001099 ORTHO05D000958 1.3e-09 67.4 107 37.4
Migut.C00064 Erythranthe guttata HOM05D001099 ORTHO05D000958 1.7e-09 67.0 112 41.1
Lj2P216T41 Lonicera japonica HOM05D001099 ORTHO05D000958 1.7e-09 67.0 104 40.4
BraA03t10910Z Brassica rapa HOM05D001099 ORTHO05D000958 2.3e-09 66.6 140 32.1
CAN.G1367.3 Capsicum annuum HOM05D001099 ORTHO05D000958 2.3e-09 66.6 103 36.9
Glyma.12G013100 Glycine max HOM05D001099 ORTHO05D000958 2.3e-09 66.6 127 37.8
GSVIVG01018654001 Vitis vinifera HOM05D001099 ORTHO05D000958 2.3e-09 66.6 104 40.4
BcaNung06351 Brassica carinata HOM05D001099 ORTHO05D000958 2.9e-09 66.2 120 36.7
CAN.G164.15 Capsicum annuum HOM05D001099 ORTHO05D000958 2.9e-09 66.2 103 38.8
Cfa012707 Carpinus fangiana HOM05D001099 ORTHO05D000958 2.9e-09 66.2 120 36.7
Nitab4.5_0007598g0030 Nicotiana tabacum HOM05D001099 ORTHO05D000958 2.9e-09 66.2 99 38.4
TPR.G20264 Trifolium pratense HOM05D001099 ORTHO05D000958 2.9e-09 66.2 113 36.3
Atru.chr1.727 Acer truncatum HOM05D001099 ORTHO05D000958 3.8e-09 65.9 185 29.7
Ca_19626_v3 Cicer arietinum L. HOM05D001099 ORTHO05D000958 3.8e-09 65.9 105 40.0
FAN01G1499 Fragaria x ananassa HOM05D001099 ORTHO05D000958 3.8e-09 65.9 136 34.6
Os06g0219500 Oryza sativa ssp. japonica HOM05D001099 ORTHO05D000958 3.8e-09 65.9 96 40.6
MSTRG.27202 Avicennia marina HOM05D001099 ORTHO05D000958 5.0e-09 65.5 130 34.6
A01p16470 Brassica napus HOM05D001099 ORTHO05D000958 5.0e-09 65.5 109 37.6
BraA01t01601Z Brassica rapa HOM05D001099 ORTHO05D000958 5.0e-09 65.5 109 37.6
COL.COLO4_37189 Corchorus olitorius HOM05D001099 ORTHO05D000958 5.0e-09 65.5 112 36.6
Oeu022488.1 Olea europaea HOM05D001099 ORTHO05D000958 5.0e-09 65.5 111 37.8
Potri.003G109200 Populus trichocarpa HOM05D001099 ORTHO05D000958 5.0e-09 65.5 112 37.5
Hund14531 Selenicereus undatus HOM05D001099 ORTHO05D000958 5.0e-09 65.5 103 39.8
DCAR_027781 Daucus carota HOM05D001099 ORTHO05D000958 6.5e-09 65.1 107 36.4
Thecc.03G155700 Theobroma cacao HOM05D001099 ORTHO05D000958 6.5e-09 65.1 120 35.0
TWI23G0452 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 6.5e-09 65.1 104 38.5
Atru.chr1.726 Acer truncatum HOM05D001099 ORTHO05D000958 8.6e-09 64.7 104 35.6
Cpa.g.sc3.323 Carica papaya HOM05D001099 ORTHO05D000958 8.6e-09 64.7 120 35.8
ClCG10G002740 Citrullus lanatus HOM05D001099 ORTHO05D000958 8.6e-09 64.7 119 37.0
Dinv21632 Davidia involucrata HOM05D001099 ORTHO05D000958 8.6e-09 64.7 126 34.1
Gorai.008G216100 Gossypium raimondii HOM05D001099 ORTHO05D000958 8.6e-09 64.7 102 35.3
Lalb_Chr01g0000691 Lupinus albus HOM05D001099 ORTHO05D000958 8.6e-09 64.7 104 39.4
Manes.06G134700 Manihot esculenta HOM05D001099 ORTHO05D000958 8.6e-09 64.7 104 38.5
PSO782G2285 Papaver somniferum HOM05D001099 ORTHO05D000958 8.6e-09 64.7 103 37.9
VMungo1127G1536 Vigna mungo HOM05D001099 ORTHO05D000958 8.6e-09 64.7 127 37.8
BcaC09g50798 Brassica carinata HOM05D001099 ORTHO05D000958 1.1e-08 64.3 120 35.8
C01p20640 Brassica napus HOM05D001099 ORTHO05D000958 1.1e-08 64.3 120 35.8
BolC1t01993H Brassica oleracea HOM05D001099 ORTHO05D000958 1.1e-08 64.3 120 35.8
Nn6g33979 Nelumbo nucifera HOM05D001099 ORTHO05D000958 1.1e-08 64.3 127 34.6
Peaxi162Scf00023g01123 Petunia axillaris HOM05D001099 ORTHO05D000958 1.1e-08 64.3 105 40.0
Sabra03G0075700 Salix brachista HOM05D001099 ORTHO05D000958 1.1e-08 64.3 112 36.6
SGA_v2.0_scaffold2G01176 Striga asiatica HOM05D006974 ORTHO05D008869 1.1e-08 64.3 90 40.0
MELO3C013945.2 Cucumis melo HOM05D001099 ORTHO05D000958 1.5e-08 63.9 119 36.1
A03p16190 Brassica napus HOM05D001099 ORTHO05D000958 1.9e-08 63.5 150 32.7
CsaV3_3G002770 Cucumis sativus L. HOM05D001099 ORTHO05D000958 1.9e-08 63.5 119 36.1
Gohir.A12G198400 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.9e-08 63.5 102 35.3
Sp7g23220 Schrenkiella parvula HOM05D001099 ORTHO05D000958 1.9e-08 63.5 108 38.9
Hund11593 Selenicereus undatus HOM05D001099 ORTHO05D000958 1.9e-08 63.5 104 38.5
AL8G25730 Arabidopsis lyrata HOM05D001099 ORTHO05D000958 2.5e-08 63.2 125 38.4
CSS0016514 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 2.5e-08 63.2 119 34.5
CARHR232600 Cardamine hirsuta HOM05D001099 ORTHO05D000958 2.5e-08 63.2 108 37.0
AUR62007509 Chenopodium quinoa HOM05D001099 ORTHO05D000958 2.5e-08 63.2 120 38.3
ClCG04G005380 Citrullus lanatus HOM05D001099 ORTHO05D000958 2.5e-08 63.2 119 36.1
Ciclev10006241m.g Citrus clementina HOM05D001099 ORTHO05D000958 2.5e-08 63.2 103 35.9
Haze_07927 Corylus avellana HOM05D001099 ORTHO05D000958 2.5e-08 63.2 127 36.2
CsaV3_3G002780 Cucumis sativus L. HOM05D001099 ORTHO05D000958 2.5e-08 63.2 119 35.3
Thhalv10026232m.g Eutrema salsugineum HOM05D001099 ORTHO05D000958 2.5e-08 63.2 108 38.0
HanXRQChr03g0088611 Helianthus annuus HOM05D001099 ORTHO05D000958 2.5e-08 63.2 128 36.7
PGR031G0040 Punica granatum HOM05D001099 ORTHO05D000958 2.5e-08 63.2 103 35.9
CANSAT56G2602 Cannabis sativa HOM05D001099 ORTHO05D000958 3.2e-08 62.8 120 35.0
MD06G1060300 Malus domestica HOM05D001099 ORTHO05D000958 3.2e-08 62.8 103 35.0
Manes.14G036000 Manihot esculenta HOM05D001099 ORTHO05D000958 3.2e-08 62.8 104 38.5
Phvul.011G016100 Phaseolus vulgaris HOM05D001099 ORTHO05D000958 3.2e-08 62.8 127 37.8
Rhsim07G0020900 Rhododendron simsii HOM05D001099 ORTHO05D000958 3.2e-08 62.8 120 32.5
Solyc08g078700.2 Solanum lycopersicum HOM05D001099 ORTHO05D000958 3.2e-08 62.8 103 35.0
Sopen08g027180 Solanum pennellii HOM05D001099 ORTHO05D000958 3.2e-08 62.8 103 35.0
Aa31LG7G10380 Aethionema arabicum HOM05D001099 ORTHO05D000958 4.2e-08 62.4 96 36.5
arahy.Tifrunner.gnm1.ann1.PCT7KU Arachis hypogaea HOM05D001099 ORTHO05D000958 4.2e-08 62.4 103 37.9
arahy.Tifrunner.gnm1.ann1.TQI4QJ Arachis hypogaea HOM05D001099 ORTHO05D000958 4.2e-08 62.4 103 37.9
CANSAT56G3256 Cannabis sativa HOM05D001099 ORTHO05D000958 4.2e-08 62.4 120 35.0
CiPaw.12G109200 Carya illinoinensis HOM05D001099 ORTHO05D000958 4.2e-08 62.4 126 34.9
MELO3C013946.2 Cucumis melo HOM05D001099 ORTHO05D000958 4.2e-08 62.4 119 35.3
RcHm_v2.0_Chr7g0203041 Rosa chinensis HOM05D001099 ORTHO05D000958 4.2e-08 62.4 126 34.9
SGA_v2.0_scaffold4G02380 Striga asiatica HOM05D001099 ORTHO05D000958 4.2e-08 62.4 109 37.6
AL7G27950 Arabidopsis lyrata HOM05D001099 ORTHO05D000958 5.5e-08 62.0 109 35.8
AUR62039962 Chenopodium quinoa HOM05D001099 ORTHO05D000958 5.5e-08 62.0 113 38.1
PSO063G5704 Papaver somniferum HOM05D001099 ORTHO05D000958 5.5e-08 62.0 169 32.5
PSO782G1367 Papaver somniferum HOM05D001099 ORTHO05D000958 5.5e-08 62.0 169 32.5
Psat4g136720 Pisum sativum HOM05D001099 ORTHO05D000958 5.5e-08 62.0 105 35.2
PGSC0003DMG400004808 Solanum tuberosum HOM05D001099 ORTHO05D000958 5.5e-08 62.0 103 35.0
COL.COLO4_14123 Corchorus olitorius HOM05D001099 ORTHO05D000958 7.2e-08 61.6 105 38.1
Gohir.D08G189200 Gossypium hirsutum HOM05D001099 ORTHO05D000958 7.2e-08 61.6 117 34.2
Gohir.D12G201000 Gossypium hirsutum HOM05D001099 ORTHO05D000958 7.2e-08 61.6 102 33.3
Lj3g0025824 Lotus japonicus HOM05D001099 ORTHO05D000958 7.2e-08 61.6 104 36.5
Medtr0004s0510 Medicago truncatula HOM05D001099 ORTHO05D000958 7.2e-08 61.6 104 36.5
Sed0013728 Sechium edule HOM05D001099 ORTHO05D000958 7.2e-08 61.6 104 36.5
AT4G25200 Arabidopsis thaliana HOM05D001099 ORTHO05D000958 9.5e-08 61.2 108 36.1
Duzib205G0330 Durio zibethinus HOM05D001099 ORTHO05D000958 9.5e-08 61.2 104 32.7
MBI05_g10091_MAGBIO Magnolia biondii HOM05D001099 ORTHO05D000958 9.5e-08 61.2 112 35.7
Thecc.03G252700 Theobroma cacao HOM05D001099 ORTHO05D000958 9.5e-08 61.2 112 35.7
AT5G51440 Arabidopsis thaliana HOM05D001099 ORTHO05D000958 1.2e-07 60.8 105 35.2
Eucgr.E00433 Eucalyptus grandis HOM05D001099 ORTHO05D000958 1.2e-07 60.8 121 35.5
Hma1.2p1_0432F.1_g151730 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 1.2e-07 60.8 111 39.6
Hma1.2p1_1640F.1_g295060 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 1.2e-07 60.8 104 33.7
PGR042G2034 Punica granatum HOM05D001099 ORTHO05D000958 1.2e-07 60.8 105 33.3
CDE03G0474 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 1.6e-07 60.5 99 37.4
Nn1g01033 Nelumbo nucifera HOM05D001099 ORTHO05D000958 1.6e-07 60.5 109 33.9
SalBow8G3662 Salvia bowleyana HOM05D008298 ORTHO05D000958 1.6e-07 60.5 147 32.7
Eucgr.D02073 Eucalyptus grandis HOM05D001099 ORTHO05D000958 2.1e-07 60.1 105 33.3
Thhalv10014661m.g Eutrema salsugineum HOM05D001099 ORTHO05D000958 2.1e-07 60.1 109 34.9
HanXRQChr13g0418041 Helianthus annuus HOM05D001099 ORTHO05D000958 2.1e-07 60.1 107 34.6
TAR082G0002 Trochodendron aralioides HOM05D001099 ORTHO05D000958 2.1e-07 60.1 104 34.6
EL10Ac5g13076 Beta vulgaris HOM05D001099 ORTHO05D000958 2.8e-07 59.7 104 37.5
Carub.0008s1146 Capsella rubella HOM05D001099 ORTHO05D000958 2.8e-07 59.7 107 35.5
Gorai.004G199300 Gossypium raimondii HOM05D001099 ORTHO05D000958 3.6e-07 59.3 117 34.2
MD07G1253800 Malus domestica HOM05D001099 ORTHO05D000958 3.6e-07 59.3 106 34.0
Carub.0007s1583 Capsella rubella HOM05D001099 ORTHO05D000958 4.7e-07 58.9 109 34.9
CARHR264170 Cardamine hirsuta HOM05D001099 ORTHO05D000958 6.1e-07 58.5 108 37.0
TWI39G1145 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 6.1e-07 58.5 101 33.7
TWI81G0609 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 1.0e-06 57.8 102 33.3
Actinidia02125 Actinidia chinensis HOM05D001099 ORTHO05D000958 1.4e-06 57.4 103 30.1
Ah.12g056780 Amaranthus hybridus HOM05D001099 ORTHO05D000958 1.4e-06 57.4 104 37.5
ECA240G1483 Erigeron canadensis HOM05D001099 ORTHO05D000958 1.4e-06 57.4 110 31.8
Oeu038321.1 Olea europaea HOM05D001099 ORTHO05D000958 1.4e-06 57.4 121 32.2
Sc01g0008520 Simmondsia chinensis HOM05D001099 ORTHO05D000958 1.4e-06 57.4 104 36.5
Ciclev10005925m.g Citrus clementina HOM05D001099 ORTHO05D000958 1.8e-06 57.0 163 29.4
Dinv21631 Davidia involucrata HOM05D001099 ORTHO05D010560 1.8e-06 57.0 90 27.8
PGR042G1017 Punica granatum HOM05D001099 ORTHO05D000958 1.8e-06 57.0 130 34.6
Rhsim03G0167300 Rhododendron simsii HOM05D001099 ORTHO05D000958 1.8e-06 57.0 100 35.0
Sabra03G0046400 Salix brachista HOM05D009070 ORTHO05D010560 1.8e-06 57.0 86 37.2
Lsat_1_v5_gn_3_481 Lactuca sativa HOM05D001099 ORTHO05D000958 4.0e-06 55.8 97 36.1
Lj5C71T5 Lonicera japonica HOM05D000136 ORTHO05D007933 4.0e-06 55.8 99 33.3
GSVIVG01001315001 Vitis vinifera HOM05D001099 ORTHO05D000958 4.0e-06 55.8 103 32.0
Dinv39137 Davidia involucrata HOM05D001099 ORTHO05D010560 6.8e-06 55.1 96 34.4
Potri.003G075900 Populus trichocarpa HOM05D001099 ORTHO05D000958 6.8e-06 55.1 86 36.0
A10p09350 Brassica napus HOM05D001099 ORTHO05D000958 8.8e-06 54.7 87 35.6
Hma1.2p1_1786F.1_g302340 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 8.8e-06 54.7 86 39.5
QL12p012417 Quercus lobata HOM05D001099 ORTHO05D000958 8.8e-06 54.7 114 32.5


User provided reference genes

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