Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold238G43944 Striga asiatica HOM05D009630 ORTHO05D018137 3.6e-111 404.8 193 100.0
SGA_v2.0_scaffold137G35133 Striga asiatica HOM05D009630 ORTHO05D018137 1.3e-76 290.0 190 70.5
SGA_v2.0_scaffold334G49026 Striga asiatica HOM05D009630 ORTHO05D018137 2.7e-74 282.3 191 69.6
SGA_v2.0_scaffold229G43353 Striga asiatica HOM05D009630 ORTHO05D018137 6.7e-73 277.7 164 78.7
SGA_v2.0_scaffold36G14360 Striga asiatica HOM05D009630 ORTHO05D018137 3.1e-54 215.7 187 59.9
SGA_v2.0_scaffold62G21306 Striga asiatica HOM05D009630 ORTHO05D018137 1.2e-24 117.5 84 69.0
SGA_v2.0_scaffold29G12080 Striga asiatica HOM05D009630 ORTHO05D018137 3.5e-21 105.9 161 37.9
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 2.3e-12 76.6 196 27.6
Atru.chr2.176 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-11 73.6 192 27.1
CANSAT64G1142 Cannabis sativa HOM05D000003 ORTHO05D000167 9.5e-11 71.2 191 27.2
CANSAT78G1435 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-10 69.7 199 24.1
RcHm_v2.0_Chr4g0402201 Rosa chinensis HOM05D000003 ORTHO05D000004 8.1e-10 68.2 199 25.6
Atru.chr1.3159 Acer truncatum HOM05D000003 ORTHO05D000167 3.1e-09 66.2 194 25.8
RcHm_v2.0_Chr4g0398671 Rosa chinensis HOM05D000003 ORTHO05D010102 3.1e-09 66.2 198 29.3
Atru.chr8.1648 Acer truncatum HOM05D000003 ORTHO05D000167 8.9e-09 64.7 192 26.0
CANSAT21G1369 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-08 64.3 199 24.6
Sed0017730 Sechium edule HOM05D000003 ORTHO05D000004 1.2e-08 64.3 197 30.5
Atru.chr5.1622 Acer truncatum HOM05D000003 ORTHO05D000004 9.9e-08 61.2 189 25.9
CANSAT56G3043 Cannabis sativa HOM05D000003 ORTHO05D000167 9.9e-08 61.2 128 29.7
EL10Ac4g10128 Beta vulgaris HOM05D004808 ORTHO05D005279 1.3e-07 60.8 162 27.8
SGA_v2.0_scaffold486G52373 Striga asiatica HOM05D009630 ORTHO05D018137 1.3e-07 60.8 37 70.3
Sed0006726 Sechium edule HOM05D000003 ORTHO05D000167 1.7e-07 60.5 201 24.4
Atru.chr13.1818 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-07 60.1 194 25.3
Sed0017531 Sechium edule HOM05D000003 ORTHO05D000126 3.7e-07 59.3 201 23.9
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 3.7e-07 59.3 190 25.8
CANSAT56G0050 Cannabis sativa HOM05D000031 ORTHO05D000030 4.9e-07 58.9 125 30.4
CANSAT64G1526 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.8 126 32.5
Atru.chr9.304 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-06 57.0 196 21.9
Aa31sc85G50 Aethionema arabicum HOM05D000003 ORTHO05D001091 1.9e-06 57.0 114 27.2
Atru.chr2.2006 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 56.6 196 22.4
CANSAT25G1682 Cannabis sativa HOM05D000003 ORTHO05D000167 2.4e-06 56.6 125 28.8
CANSAT56G0621 Cannabis sativa HOM05D000003 ORTHO05D000167 3.2e-06 56.2 126 29.4
Atru.chr11.920 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-06 55.8 193 22.8
CANSAT80G2229 Cannabis sativa HOM05D000003 ORTHO05D000004 4.1e-06 55.8 192 22.9
RcHm_v2.0_Chr3g0468731 Rosa chinensis HOM05D008097 ORTHO05D010102 4.1e-06 55.8 191 24.1
CANSAT35G1919 Cannabis sativa HOM05D000003 ORTHO05D000004 5.4e-06 55.5 199 25.1
EL10Ac2g04418 Beta vulgaris HOM05D000003 ORTHO05D000004 9.2e-06 54.7 188 22.9
RcHm_v2.0_Chr6g0276431 Rosa chinensis HOM05D008833 ORTHO05D010662 9.2e-06 54.7 107 29.9


User provided reference genes

Program Settings