Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold238G43910 Striga asiatica HOM05D005317 ORTHO05D005146 2.1e-121 439.1 238 100.0
Migut.C00473 Erythranthe guttata HOM05D005317 ORTHO05D005146 5.4e-24 115.5 163 57.7
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 2.3e-22 110.2 155 45.2
MSTRG.25022 Avicennia marina HOM05D005317 ORTHO05D005146 7.3e-21 105.1 157 57.3
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 7.3e-21 105.1 159 50.3
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 2.8e-20 103.2 169 41.4
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 2.4e-19 100.1 161 41.6
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 2.7e-15 86.7 150 40.0
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 7.9e-15 85.1 157 39.5
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 1.8e-14 84.0 145 37.9
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 3.0e-14 83.2 152 40.1
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 7.4e-13 78.6 153 37.9
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 1.3e-12 77.8 149 37.6
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 3.7e-12 76.3 153 34.6
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 8.1e-12 75.1 152 36.8
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 8.1e-12 75.1 145 37.9
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 1.4e-11 74.3 157 36.3
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 1.8e-11 73.9 171 33.9
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 1.8e-11 73.9 155 40.6
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.4e-11 73.6 144 36.8
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 3.1e-11 73.2 146 39.7
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.2e-10 71.2 105 42.9
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 1.2e-10 71.2 160 36.2
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.5e-10 70.9 141 37.6
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 2.0e-10 70.5 152 37.5
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 3.4e-10 69.7 141 38.3
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 3.4e-10 69.7 147 36.7
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 1.0e-09 68.2 144 34.0
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 1.0e-09 68.2 175 31.4
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 1.3e-09 67.8 171 36.3
Lj4g0026806 Lotus japonicus HOM05D005317 ORTHO05D005146 1.7e-09 67.4 156 33.3
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.9e-09 66.6 145 37.2
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.9e-09 66.6 145 37.2
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.8e-09 66.2 147 34.0
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 4.9e-09 65.9 155 34.2
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 8.4e-09 65.1 156 35.3
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.1e-08 64.7 147 35.4
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 1.4e-08 64.3 141 35.5
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 1.4e-08 64.3 167 31.1
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 1.9e-08 63.9 158 32.3
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 2.5e-08 63.5 189 36.5
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 2.5e-08 63.5 163 33.7
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.5e-08 63.5 145 36.6
Gorai.002G136100 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.5e-08 63.5 133 36.1
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.5e-08 63.5 147 34.7
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 3.2e-08 63.2 164 30.5
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 3.2e-08 63.2 150 35.3
CiPaw.07G172100 Carya illinoinensis HOM05D005317 ORTHO05D005146 4.2e-08 62.8 134 36.6
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 5.5e-08 62.4 150 36.7
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 7.1e-08 62.0 149 34.2
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 9.3e-08 61.6 140 32.9
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.2e-07 61.2 158 31.0
Glyma.17G158600 Glycine max HOM05D005317 ORTHO05D005146 1.2e-07 61.2 161 32.9
Gohir.D03G030600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.6e-07 60.8 147 34.0
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 1.6e-07 60.8 153 32.0
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 1.6e-07 60.8 167 28.7
SGA_v2.0_scaffold15G07499 Striga asiatica HOM05D005317 ORTHO05D005146 1.6e-07 60.8 144 31.2
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.1e-07 60.5 147 34.7
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 2.1e-07 60.5 137 36.5
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 2.7e-07 60.1 147 32.7
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 2.7e-07 60.1 155 30.3
Duzib187G1956 Durio zibethinus HOM05D005317 ORTHO05D005146 2.7e-07 60.1 153 34.0
Gohir.A01G123550 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.6e-07 59.3 133 35.3
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 4.6e-07 59.3 142 35.2
Ciclev10027255m.g Citrus clementina HOM05D005317 ORTHO05D005146 6.0e-07 58.9 145 31.7
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.0e-07 58.9 138 31.9
Gorai.009G222000 Gossypium raimondii HOM05D005317 ORTHO05D005146 7.9e-07 58.5 138 31.9
Migut.H00325 Erythranthe guttata HOM05D005317 ORTHO05D005146 1.0e-06 58.2 150 32.7
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 1.0e-06 58.2 152 38.2
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 1.0e-06 58.2 149 31.5
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 1.0e-06 58.2 150 32.0
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.3e-06 57.8 160 30.6
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 1.8e-06 57.4 138 34.8
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.8e-06 57.4 145 29.0
SalBow3G0220 Salvia bowleyana HOM05D005317 ORTHO05D005146 1.8e-06 57.4 139 31.7
PGSC0003DMG400004968 Solanum tuberosum HOM05D005317 ORTHO05D005146 1.8e-06 57.4 154 33.8
Gorai.003G032200 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.3e-06 57.0 145 34.5
FAN27G2237 Fragaria x ananassa HOM05D030376 ORTHO05D005146 3.0e-06 56.6 168 31.5
FAN15G0380 Fragaria x ananassa HOM05D030376 ORTHO05D005146 5.1e-06 55.8 174 34.5
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 5.1e-06 55.8 149 33.6
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 6.7e-06 55.5 180 28.9
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 8.7e-06 55.1 153 35.9
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 8.7e-06 55.1 150 32.0


User provided reference genes

Program Settings