Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 1.0e-141 506.9 285 100.0
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 6.4e-96 354.8 263 77.2
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 3.7e-88 328.9 268 66.4
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 2.3e-85 319.7 267 67.0
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 7.6e-73 278.1 282 57.4
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 1.3e-72 277.3 271 59.0
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 1.4e-71 273.9 269 65.1
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 3.2e-71 272.7 264 63.3
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 4.2e-71 272.3 258 60.1
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 4.2e-71 272.3 282 56.7
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 3.0e-69 266.2 282 53.9
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 6.6e-69 265.0 271 60.5
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.5e-68 263.8 271 63.5
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 1.6e-67 260.4 265 61.9
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 1.6e-67 260.4 259 60.6
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 3.6e-67 259.2 247 60.3
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 4.8e-67 258.8 256 62.5
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 6.2e-67 258.5 285 55.8
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 1.8e-66 256.9 266 60.9
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 2.4e-66 256.5 260 57.7
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 4.0e-66 255.8 264 58.7
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.2e-65 254.2 265 54.7
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 4.5e-65 252.3 263 63.5
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 5.8e-65 251.9 273 56.0
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 7.6e-65 251.5 259 57.1
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 3.8e-64 249.2 274 54.0
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 2.4e-63 246.5 267 56.6
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 9.3e-63 244.6 259 54.8
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 2.7e-62 243.0 240 61.2
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 3.5e-62 242.7 265 54.0
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 3.5e-62 242.7 284 51.8
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 7.9e-62 241.5 277 54.2
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.0e-61 241.1 290 49.3
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 1.8e-61 240.4 251 59.0
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.3e-61 240.0 266 52.6
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 2.3e-61 240.0 266 57.1
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 3.0e-61 239.6 266 54.5
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 5.1e-61 238.8 257 58.0
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 5.1e-61 238.8 259 54.1
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 6.7e-61 238.4 253 54.9
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 6.7e-61 238.4 318 52.5
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 8.7e-61 238.0 265 53.2
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 8.7e-61 238.0 259 58.7
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 8.7e-61 238.0 272 52.2
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 1.1e-60 237.7 250 54.4
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.9e-60 236.9 263 52.5
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 2.5e-60 236.5 272 53.3
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 4.3e-60 235.7 261 52.1
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 5.6e-60 235.3 266 53.4
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 5.6e-60 235.3 277 52.3
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 9.6e-60 234.6 231 56.7
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 1.3e-59 234.2 273 51.6
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 1.1e-58 231.1 265 58.9
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 1.1e-58 231.1 267 50.6
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 1.4e-58 230.7 251 55.4
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 1.4e-58 230.7 249 53.8
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 2.4e-58 229.9 264 57.2
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 5.3e-58 228.8 287 52.6
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.5e-57 227.3 177 63.8
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 2.0e-57 226.9 219 56.2
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 1.3e-56 224.2 236 54.7
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 1.3e-56 224.2 220 55.5
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 1.3e-56 224.2 220 54.5
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 1.3e-56 224.2 261 51.7
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 1.7e-56 223.8 224 54.0
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 2.9e-56 223.0 225 54.2
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 4.9e-56 222.2 243 52.7
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 1.1e-55 221.1 221 53.4
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 1.9e-55 220.3 188 60.1
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.9e-55 220.3 268 48.1
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 3.2e-55 219.5 239 53.6
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 3.2e-55 219.5 229 52.4
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 4.2e-55 219.2 234 51.3
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 1.2e-54 217.6 269 47.2
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 3.5e-54 216.1 269 49.1
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 4.6e-54 215.7 234 54.7
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 6.0e-54 215.3 225 53.8
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 1.1e-52 211.1 233 51.1
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 1.9e-52 210.3 234 53.8
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 2.5e-52 209.9 260 45.8
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 2.5e-52 209.9 255 51.0
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 3.3e-52 209.5 240 50.0
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 4.3e-52 209.1 246 48.0
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 7.4e-52 208.4 264 46.6
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 9.6e-52 208.0 252 47.6
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 2.4e-50 203.4 236 51.7
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 4.0e-50 202.6 216 54.6
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 4.9e-48 195.7 224 52.2
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 4.2e-47 192.6 193 53.9
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 9.3e-47 191.4 266 48.1
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 1.0e-45 188.0 233 51.5
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 1.3e-45 187.6 186 53.2
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 1.5e-41 174.1 134 62.7
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 6.5e-40 168.7 175 54.3
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 1.2e-38 164.5 199 59.8
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 1.0e-37 161.4 220 50.5
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 6.3e-35 152.1 214 42.1
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 2.4e-34 150.2 175 45.1
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.7e-32 144.1 215 42.8
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 2.3e-29 133.7 166 51.2
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-29 133.3 175 40.6
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 1.1e-26 124.8 267 33.3
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 1.2e-22 111.3 145 46.2
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 6.1e-22 109.0 87 56.3
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 1.0e-21 108.2 147 50.3
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 1.7e-19 100.9 83 63.9
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 2.2e-19 100.5 177 44.1
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 2.5e-15 87.0 83 54.2
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 4.2e-15 86.3 87 54.0
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 5.7e-12 75.9 113 39.8
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 1.3e-11 74.7 53 73.6


User provided reference genes

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