Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold238G43892 Striga asiatica HOM05D000535 ORTHO05D000427 4.8e-137 491.1 241 100.0
SGA_v2.0_scaffold238G43890 Striga asiatica HOM05D000535 ORTHO05D009010 4.5e-58 228.8 161 70.2
SGA_v2.0_scaffold238G43897 Striga asiatica HOM05D000535 ORTHO05D000427 4.2e-16 89.4 146 39.7
SalBow5G1184 Salvia bowleyana HOM05D000535 ORTHO05D000427 2.2e-12 77.0 142 40.1
Lju170C18T0 Lonicera japonica HOM05D000535 ORTHO05D000427 4.8e-12 75.9 157 35.7
SGA_v2.0_scaffold14G07091 Striga asiatica HOM05D000535 ORTHO05D000427 4.8e-12 75.9 162 35.8
MSTRG.10952 Avicennia marina HOM05D000535 ORTHO05D000427 8.2e-12 75.1 161 35.4
SGA_v2.0_scaffold14G07097 Striga asiatica HOM05D000535 ORTHO05D000427 8.2e-12 75.1 144 36.1
Migut.O00272 Erythranthe guttata HOM05D000535 ORTHO05D000427 1.4e-11 74.3 165 36.4
Gorai.012G027700 Gossypium raimondii HOM05D000535 ORTHO05D000427 1.4e-11 74.3 172 33.7
SalBow5G3210 Salvia bowleyana HOM05D000535 ORTHO05D000427 1.8e-11 73.9 167 34.7
Gohir.A05G392000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 4.1e-11 72.8 173 32.9
Gohir.D04G025100 Gossypium hirsutum HOM05D000535 ORTHO05D000427 5.3e-11 72.4 172 33.1
Lju170C19T0 Lonicera japonica HOM05D000535 ORTHO05D000427 9.1e-11 71.6 157 33.8
SGA_v2.0_scaffold14G07094 Striga asiatica HOM05D000535 ORTHO05D000427 9.1e-11 71.6 145 38.6
Lju170C20T6 Lonicera japonica HOM05D000535 ORTHO05D000427 1.2e-10 71.2 140 35.0
Lj9C411T7 Lonicera japonica HOM05D000535 ORTHO05D000427 1.6e-10 70.9 134 35.8
Lju170C19T1 Lonicera japonica HOM05D000535 ORTHO05D000427 1.6e-10 70.9 157 33.8
Lju170C17T0 Lonicera japonica HOM05D000535 ORTHO05D000427 2.7e-10 70.1 157 33.8
Potri.004G067800 Populus trichocarpa HOM05D000535 ORTHO05D000427 2.7e-10 70.1 144 36.8
Nitab4.5_0007090g0020 Nicotiana tabacum HOM05D000535 ORTHO05D000427 4.5e-10 69.3 129 35.7
Thecc.05G197900 Theobroma cacao HOM05D000535 ORTHO05D000427 4.5e-10 69.3 151 37.7
COL.COLO4_08723 Corchorus olitorius HOM05D000535 ORTHO05D000427 5.9e-10 68.9 131 38.9
Dinv10708 Davidia involucrata HOM05D000535 ORTHO05D000427 5.9e-10 68.9 128 39.1
Cc02_g29530 Coffea canephora HOM05D000535 ORTHO05D000427 7.7e-10 68.6 153 35.3
MSTRG.10954 Avicennia marina HOM05D000535 ORTHO05D000427 1.3e-09 67.8 165 35.8
Dinv10703 Davidia involucrata HOM05D000535 ORTHO05D000427 1.3e-09 67.8 137 33.6
Sopen03g029450 Solanum pennellii HOM05D000535 ORTHO05D000427 1.3e-09 67.8 148 33.1
COL.COLO4_29947 Corchorus olitorius HOM05D000535 ORTHO05D000427 1.7e-09 67.4 139 33.1
Dinv12308 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-09 67.4 140 37.9
Duzib268G0791 Durio zibethinus HOM05D000535 ORTHO05D000427 1.7e-09 67.4 170 30.0
GSVIVG01012922001 Vitis vinifera HOM05D000535 ORTHO05D000427 1.7e-09 67.4 162 35.8
PGSC0003DMG400010131 Solanum tuberosum HOM05D000535 ORTHO05D000427 2.2e-09 67.0 149 33.6
MSTRG.11530 Avicennia marina HOM05D000535 ORTHO05D000427 2.9e-09 66.6 111 39.6
COL.COLO4_16148 Corchorus olitorius HOM05D000535 ORTHO05D000427 2.9e-09 66.6 144 28.5
DCAR_011409 Daucus carota HOM05D000535 ORTHO05D000427 2.9e-09 66.6 139 36.7
Glyma.09G163900 Glycine max HOM05D000535 ORTHO05D000427 2.9e-09 66.6 153 35.3
Lju170C15T10 Lonicera japonica HOM05D000535 ORTHO05D000427 3.8e-09 66.2 157 33.8
Potri.017G153200 Populus trichocarpa HOM05D000535 ORTHO05D000427 3.8e-09 66.2 158 31.0
Cc10_g11720 Coffea canephora HOM05D000535 ORTHO05D000427 5.0e-09 65.9 139 33.8
COL.COLO4_08721 Corchorus olitorius HOM05D000535 ORTHO05D000427 5.0e-09 65.9 162 35.8
Duzib128G0529 Durio zibethinus HOM05D000535 ORTHO05D000427 5.0e-09 65.9 131 38.2
COL.COLO4_16151 Corchorus olitorius HOM05D000535 ORTHO05D000427 6.5e-09 65.5 146 28.8
Dinv04608 Davidia involucrata HOM05D000535 ORTHO05D000427 6.5e-09 65.5 126 37.3
Lj2g0010766 Lotus japonicus HOM05D000535 ORTHO05D000427 6.5e-09 65.5 175 35.4
Lalb_Chr14g0370191 Lupinus albus HOM05D000535 ORTHO05D000427 6.5e-09 65.5 151 36.4
Dinv10702 Davidia involucrata HOM05D000535 ORTHO05D000427 8.5e-09 65.1 158 36.7
VMungo0464G1147 Vigna mungo HOM05D000535 ORTHO05D000427 8.5e-09 65.1 158 34.2
GSVIVG01012936001 Vitis vinifera HOM05D000535 ORTHO05D000427 8.5e-09 65.1 163 35.0
CAN.G929.4 Capsicum annuum HOM05D000535 ORTHO05D000427 1.1e-08 64.7 149 31.5
Glyma.16G212500 Glycine max HOM05D000535 ORTHO05D000427 1.1e-08 64.7 140 37.1
Solyc03g098740.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 1.1e-08 64.7 151 33.1
Phvul.004G138500 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 1.5e-08 64.3 139 36.7
Nitab4.5_0003040g0030 Nicotiana tabacum HOM05D000535 ORTHO05D000427 1.9e-08 63.9 134 35.8
Sc14g0008170 Simmondsia chinensis HOM05D000535 ORTHO05D000427 1.9e-08 63.9 154 33.8
HanXRQChr05g0161361 Helianthus annuus HOM05D000535 ORTHO05D000427 2.5e-08 63.5 159 32.1
Prupe.5G074400 Prunus persica HOM05D000535 ORTHO05D000427 2.5e-08 63.5 140 35.7
Prupe.5G074500 Prunus persica HOM05D000535 ORTHO05D000427 2.5e-08 63.5 140 36.4
Dinv12309 Davidia involucrata HOM05D000535 ORTHO05D000427 3.2e-08 63.2 128 38.3
Duzib128G1043 Durio zibethinus HOM05D000535 ORTHO05D000427 3.2e-08 63.2 151 35.8
Thecc.03G051800 Theobroma cacao HOM05D000535 ORTHO05D000427 3.2e-08 63.2 123 35.8
Thecc.05G198000 Theobroma cacao HOM05D000535 ORTHO05D000427 3.2e-08 63.2 116 37.9
CAN.G929.5 Capsicum annuum HOM05D000535 ORTHO05D000427 4.2e-08 62.8 153 29.4
Nitab4.5_0000477g0200 Nicotiana tabacum HOM05D000535 ORTHO05D000427 4.2e-08 62.8 136 33.8
Oeu057516.1 Olea europaea HOM05D000535 ORTHO05D000427 4.2e-08 62.8 172 31.4
PGR044G0702 Punica granatum HOM05D000535 ORTHO05D000427 5.5e-08 62.4 145 39.3
Gohir.A05G392100 Gossypium hirsutum HOM05D000535 ORTHO05D000427 7.2e-08 62.0 152 35.5
Gohir.D04G025000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 7.2e-08 62.0 152 35.5
Gohir.D10G224000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 7.2e-08 62.0 97 36.1
Gorai.012G027600 Gossypium raimondii HOM05D000535 ORTHO05D000427 7.2e-08 62.0 152 35.5
Hma1.2p1_0807F.1_g221390 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 7.2e-08 62.0 144 36.1
Nitab4.5_0001495g0070 Nicotiana tabacum HOM05D000535 ORTHO05D000427 7.2e-08 62.0 144 33.3
Nitab4.5_0007717g0030 Nicotiana tabacum HOM05D000535 ORTHO05D010923 7.2e-08 62.0 142 34.5
Peaxi162Scf00171g00131 Petunia axillaris HOM05D000535 ORTHO05D000427 7.2e-08 62.0 128 34.4
TAR374G0927 Trochodendron aralioides HOM05D000535 ORTHO05D000427 7.2e-08 62.0 145 36.6
CiPaw.16G075200 Carya illinoinensis HOM05D000535 ORTHO05D000427 9.4e-08 61.6 125 37.6
Dinv04609 Davidia involucrata HOM05D000535 ORTHO05D000427 9.4e-08 61.6 120 38.3
Dinv12307 Davidia involucrata HOM05D000535 ORTHO05D000006 9.4e-08 61.6 141 34.0
Nitab4.5_0002771g0010 Nicotiana tabacum HOM05D000535 ORTHO05D000427 9.4e-08 61.6 136 32.4
CsaV3_1G007570 Cucumis sativus L. HOM05D000535 ORTHO05D000427 1.2e-07 61.2 146 34.2
Dinv10707 Davidia involucrata HOM05D000535 ORTHO05D000427 1.2e-07 61.2 162 31.5
Hma1.2p1_0807F.1_g221380 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 1.2e-07 61.2 111 37.8
Hma1.2p1_0807F.1_g221420 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 1.2e-07 61.2 144 36.1
Ciclev10022124m.g Citrus clementina HOM05D000535 ORTHO05D000427 1.6e-07 60.8 138 33.3
Lj5P167T32 Lonicera japonica HOM05D000535 ORTHO05D000427 1.6e-07 60.8 116 37.9
Duzib268G0452 Durio zibethinus HOM05D000535 ORTHO05D000427 2.1e-07 60.5 161 31.7
Duzib268G0986 Durio zibethinus HOM05D000535 ORTHO05D000427 2.1e-07 60.5 161 32.3
Duzib268G1310 Durio zibethinus HOM05D000535 ORTHO05D000427 2.1e-07 60.5 166 31.3
Sabra04G0045700 Salix brachista HOM05D000535 ORTHO05D000427 2.1e-07 60.5 167 34.1
FvH4_5g18500 Fragaria vesca HOM05D000535 ORTHO05D000427 2.7e-07 60.1 137 37.2
QL10p033926 Quercus lobata HOM05D000535 ORTHO05D000427 2.7e-07 60.1 127 37.0
Thecc.03G051300 Theobroma cacao HOM05D000535 ORTHO05D000427 2.7e-07 60.1 165 32.1
Aa31LG4G3590 Aethionema arabicum HOM05D000535 ORTHO05D009010 3.6e-07 59.7 150 31.3
Cfa017803 Carpinus fangiana HOM05D000535 ORTHO05D000427 3.6e-07 59.7 143 35.0
Cc00_g04330 Coffea canephora HOM05D000535 ORTHO05D000427 3.6e-07 59.7 139 34.5
DCAR_011412 Daucus carota HOM05D000535 ORTHO05D000427 3.6e-07 59.7 145 35.9
Duzib268G1756 Durio zibethinus HOM05D000535 ORTHO05D000427 3.6e-07 59.7 161 30.4
FAN13G1742 Fragaria x ananassa HOM05D000535 ORTHO05D000427 3.6e-07 59.7 126 38.1
FAN13G2343 Fragaria x ananassa HOM05D000535 ORTHO05D000427 3.6e-07 59.7 130 36.2
Peaxi162Scf00643g00055 Petunia axillaris HOM05D000535 ORTHO05D000427 3.6e-07 59.7 158 32.9
TWI15G0556 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 3.6e-07 59.7 119 36.1
GSVIVG01012920001 Vitis vinifera HOM05D000535 ORTHO05D000427 3.6e-07 59.7 138 34.1
Actinidia26771 Actinidia chinensis HOM05D000535 ORTHO05D000427 4.7e-07 59.3 136 37.5
AL2G33090 Arabidopsis lyrata HOM05D000535 ORTHO05D000427 4.7e-07 59.3 159 31.4
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 4.7e-07 59.3 150 35.3
Sabra04G0045600 Salix brachista HOM05D000535 ORTHO05D012080 4.7e-07 59.3 71 45.1
Atru.chr10.1154 Acer truncatum HOM05D000535 ORTHO05D000427 6.1e-07 58.9 150 37.3
MELO3C002175.2 Cucumis melo HOM05D000535 ORTHO05D000427 6.1e-07 58.9 141 35.5
Eucgr.K02326 Eucalyptus grandis HOM05D000535 ORTHO05D000427 6.1e-07 58.9 157 32.5
FAN11G2490 Fragaria x ananassa HOM05D000535 ORTHO05D000427 6.1e-07 58.9 169 31.4
Eucgr.L03158 Eucalyptus grandis HOM05D000535 ORTHO05D000427 8.0e-07 58.5 157 31.8
Gohir.D10G223700 Gossypium hirsutum HOM05D000535 ORTHO05D000427 8.0e-07 58.5 131 30.5
LjContig00385g0008709 Lotus japonicus HOM05D000535 ORTHO05D000427 8.0e-07 58.5 136 35.3
SalBow5G3406 Salvia bowleyana HOM05D000535 ORTHO05D000427 8.0e-07 58.5 115 33.0
Solyc06g072230.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 8.0e-07 58.5 146 30.8
Cc00_g30520 Coffea canephora HOM05D000535 ORTHO05D000427 1.0e-06 58.2 139 33.8
Duzib268G1738 Durio zibethinus HOM05D000535 ORTHO05D000427 1.0e-06 58.2 166 30.7
Lj2P607T10 Lonicera japonica HOM05D000535 ORTHO05D000427 1.0e-06 58.2 149 32.2
Lj2g0011821 Lotus japonicus HOM05D000535 ORTHO05D000427 1.0e-06 58.2 143 33.6
Prupe.4G155200 Prunus persica HOM05D000535 ORTHO05D000427 1.0e-06 58.2 120 36.7
RcHm_v2.0_Chr5g0029031 Rosa chinensis HOM05D000535 ORTHO05D000427 1.0e-06 58.2 114 36.8
Sopen06g028550 Solanum pennellii HOM05D000535 ORTHO05D000427 1.0e-06 58.2 154 31.2
Thecc.03G051600 Theobroma cacao HOM05D000535 ORTHO05D000427 1.0e-06 58.2 163 31.9
AUR62005782 Chenopodium quinoa HOM05D000535 ORTHO05D000427 1.4e-06 57.8 149 32.2
FAN16G2894 Fragaria x ananassa HOM05D000535 ORTHO05D000427 1.4e-06 57.8 169 31.4
Gohir.D10G223600 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.4e-06 57.8 131 30.5
Gohir.D10G223800 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.4e-06 57.8 131 30.5
HanXRQChr06g0165011 Helianthus annuus HOM05D000535 ORTHO05D000427 1.4e-06 57.8 130 34.6
Potri.004G067900 Populus trichocarpa HOM05D000535 ORTHO05D000427 1.4e-06 57.8 165 32.7
Thecc.03G051900 Theobroma cacao HOM05D000535 ORTHO05D000427 1.4e-06 57.8 163 31.9
Duzib268G0985 Durio zibethinus HOM05D000535 ORTHO05D000427 1.8e-06 57.4 166 30.1
Gohir.D10G223650 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.8e-06 57.4 131 32.1
Gorai.011G254500 Gossypium raimondii HOM05D000535 ORTHO05D000427 1.8e-06 57.4 131 32.1
Gorai.011G254600 Gossypium raimondii HOM05D000535 ORTHO05D000427 1.8e-06 57.4 131 30.5
Lj2g0000790 Lotus japonicus HOM05D000535 ORTHO05D000427 1.8e-06 57.4 167 31.7
Lj2g0002029 Lotus japonicus HOM05D000535 ORTHO05D000427 1.8e-06 57.4 167 31.7
Aqoxy6G01729 Aquilegia oxysepala HOM05D000535 ORTHO05D000427 2.3e-06 57.0 146 33.6
Dinv10701 Davidia involucrata HOM05D000535 ORTHO05D000427 2.3e-06 57.0 167 31.7
vmacro18604 Vaccinium macrocarpon HOM05D000535 ORTHO05D000427 2.3e-06 57.0 140 34.3
CAN.G861.43 Capsicum annuum HOM05D010028 ORTHO05D012080 3.0e-06 56.6 133 33.1
Cpa.g.sc3.355 Carica papaya HOM05D000535 ORTHO05D000427 3.0e-06 56.6 127 35.4
Duzib205G1520 Durio zibethinus HOM05D000535 ORTHO05D000427 3.0e-06 56.6 136 32.4
FAN25G3174 Fragaria x ananassa HOM05D000535 ORTHO05D000427 3.0e-06 56.6 126 34.9
Gohir.D10G223500 Gossypium hirsutum HOM05D000535 ORTHO05D000427 3.0e-06 56.6 114 31.6
Gorai.011G254400 Gossypium raimondii HOM05D000535 ORTHO05D000427 3.0e-06 56.6 114 31.6
HanXRQChr06g0165021 Helianthus annuus HOM05D000535 ORTHO05D000427 3.0e-06 56.6 144 34.7
HanXRQChr08g0211891 Helianthus annuus HOM05D000535 ORTHO05D000427 3.0e-06 56.6 153 37.3
Lj2g0005225 Lotus japonicus HOM05D000535 ORTHO05D000427 3.0e-06 56.6 154 33.1
vmacro18605 Vaccinium macrocarpon HOM05D000535 ORTHO05D000427 3.0e-06 56.6 168 32.1
MELO3C002177.2 Cucumis melo HOM05D000535 ORTHO05D000427 4.0e-06 56.2 145 32.4
Eucgr.L01961 Eucalyptus grandis HOM05D000535 ORTHO05D000427 4.0e-06 56.2 151 32.5
Gohir.A10G214900 Gossypium hirsutum HOM05D000535 ORTHO05D000427 4.0e-06 56.2 131 30.5
Gohir.A10G215064 Gossypium hirsutum HOM05D000535 ORTHO05D000427 4.0e-06 56.2 131 29.0
Nitab4.5_0016396g0010 Nicotiana tabacum HOM05D000535 ORTHO05D000427 4.0e-06 56.2 123 36.6
RcHm_v2.0_Chr5g0029081 Rosa chinensis HOM05D000535 ORTHO05D000427 4.0e-06 56.2 111 36.9
PGSC0003DMG400027052 Solanum tuberosum HOM05D000535 ORTHO05D000427 4.0e-06 56.2 158 28.5
Cc00_g31050 Coffea canephora HOM05D000535 ORTHO05D000427 5.2e-06 55.8 137 32.8
Cc10_g11700 Coffea canephora HOM05D000535 ORTHO05D000427 5.2e-06 55.8 139 31.7
FvH4_5g18510 Fragaria vesca HOM05D000535 ORTHO05D000427 5.2e-06 55.8 130 34.6
FAN18G1447 Fragaria x ananassa HOM05D002264 ORTHO05D000427 5.2e-06 55.8 130 35.4
TWI12G0051 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 5.2e-06 55.8 117 35.9
arahy.Tifrunner.gnm1.ann1.K2SWWG Arachis hypogaea HOM05D000535 ORTHO05D000427 6.8e-06 55.5 145 31.0
Cpa.g.sc8.317 Carica papaya HOM05D000535 ORTHO05D000427 6.8e-06 55.5 166 29.5
Medtr2g073010 Medicago truncatula HOM05D000535 ORTHO05D000427 6.8e-06 55.5 161 31.7
TWI15G1241 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 6.8e-06 55.5 131 33.6
Dinv10704 Davidia involucrata HOM05D000535 ORTHO05D000427 8.8e-06 55.1 125 33.6
Gohir.A10G215000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 8.8e-06 55.1 131 29.8
HanXRQChr06g0164771 Helianthus annuus HOM05D000535 ORTHO05D000427 8.8e-06 55.1 151 33.1
Oeu020484.1 Olea europaea HOM05D000535 ORTHO05D000427 8.8e-06 55.1 143 33.6
QL09p011651 Quercus lobata HOM05D000535 ORTHO05D000427 8.8e-06 55.1 117 35.9


User provided reference genes

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