Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold237G43872 Striga asiatica HOM05D002693 ORTHO05D008074 5.0e-232 807.4 400 100.0
SGA_v2.0_scaffold90G27784 Striga asiatica HOM05D002693 ORTHO05D008074 3.5e-31 140.2 125 63.2
SalBow5G1929 Salvia bowleyana HOM05D002693 ORTHO05D008074 1.1e-29 135.2 125 60.0
Hund18531 Selenicereus undatus HOM05D002693 ORTHO05D008074 1.6e-28 131.3 125 58.4
PGSC0003DMG400015165 Solanum tuberosum HOM05D002693 ORTHO05D008074 2.1e-28 131.0 125 58.4
MSTRG.11525 Avicennia marina HOM05D002693 ORTHO05D008074 2.7e-28 130.6 125 56.8
Nitab4.5_0002531g0130 Nicotiana tabacum HOM05D002693 ORTHO05D008074 4.7e-28 129.8 125 56.8
Solyc03g111610.3 Solanum lycopersicum HOM05D002693 ORTHO05D008074 4.7e-28 129.8 125 58.4
unitig_0.g1407 Utricularia gibba HOM05D002693 ORTHO05D008074 4.7e-28 129.8 125 56.8
Nitab4.5_0001360g0120 Nicotiana tabacum HOM05D002693 ORTHO05D008074 8.0e-28 129.0 125 56.8
CAN.G472.45 Capsicum annuum HOM05D002693 ORTHO05D008074 1.0e-27 128.6 125 57.6
Cc04_g10650 Coffea canephora HOM05D002693 ORTHO05D008074 1.0e-27 128.6 125 57.6
Sabra15G0111400 Salix brachista HOM05D002693 ORTHO05D008074 1.0e-27 128.6 125 57.6
AT3G48420 Arabidopsis thaliana HOM05D002693 ORTHO05D008074 1.4e-27 128.3 125 57.6
Migut.O00226 Erythranthe guttata HOM05D002693 ORTHO05D008074 1.4e-27 128.3 125 56.8
A06p27660 Brassica napus HOM05D002693 ORTHO05D008074 1.8e-27 127.9 172 47.7
QL10p005573 Quercus lobata HOM05D002693 ORTHO05D008074 1.8e-27 127.9 125 57.6
THA.LOC104821498 Tarenaya hassleriana HOM05D002693 ORTHO05D008074 1.8e-27 127.9 125 57.6
Dinv38484 Davidia involucrata HOM05D002693 ORTHO05D008074 2.3e-27 127.5 125 57.6
PGR044G0360 Punica granatum HOM05D002693 ORTHO05D008074 2.3e-27 127.5 125 56.8
Sopen03g030730 Solanum pennellii HOM05D002693 ORTHO05D008074 2.3e-27 127.5 125 57.6
GSVIVG01007572001 Vitis vinifera HOM05D002693 ORTHO05D008074 3.0e-27 127.1 125 57.6
Eucgr.K02765 Eucalyptus grandis HOM05D002693 ORTHO05D008074 4.0e-27 126.7 125 57.6
Nn4g22488 Nelumbo nucifera HOM05D002693 ORTHO05D008074 4.0e-27 126.7 125 56.8
AUR62025747 Chenopodium quinoa HOM05D002693 ORTHO05D008074 5.2e-27 126.3 125 56.0
CsaV3_1G000830 Cucumis sativus L. HOM05D002693 ORTHO05D008074 5.2e-27 126.3 125 56.0
MBI08_g18358_MAGBIO Magnolia biondii HOM05D002693 ORTHO05D008074 5.2e-27 126.3 125 56.0
BcaB01g00815 Brassica carinata HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 56.0
BcaC01g02341 Brassica carinata HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 56.8
BcaC07g39324 Brassica carinata HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 56.8
C03p66400 Brassica napus HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 56.8
C08p23410 Brassica napus HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 56.0
BolC3t18913H Brassica oleracea HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 56.8
BolC8t49969H Brassica oleracea HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 56.0
BraA06t25011Z Brassica rapa HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 56.8
CiPaw.11G013400 Carya illinoinensis HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 56.8
MD14G1165800 Malus domestica HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 56.8
Oeu053509.1 Olea europaea HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 56.8
Peaxi162Scf00089g00838 Petunia axillaris HOM05D002693 ORTHO05D008074 6.8e-27 125.9 125 57.6
Carub.0005s1458 Capsella rubella HOM05D002693 ORTHO05D008074 8.8e-27 125.6 125 56.0
Thhalv10010540m.g Eutrema salsugineum HOM05D002693 ORTHO05D008074 8.8e-27 125.6 125 56.8
Glyma.06G174200 Glycine max HOM05D002693 ORTHO05D008074 8.8e-27 125.6 125 56.0
Sp5g13640 Schrenkiella parvula HOM05D002693 ORTHO05D008074 8.8e-27 125.6 125 56.8
CSS0044980 Camellia sinensis var. sinensis HOM05D002693 ORTHO05D008074 1.2e-26 125.2 125 56.0
Duzib205G0413 Durio zibethinus HOM05D002693 ORTHO05D008074 1.2e-26 125.2 125 56.0
Actinidia36776 Actinidia chinensis HOM05D002693 ORTHO05D008074 1.5e-26 124.8 125 56.0
Ciclev10020897m.g Citrus clementina HOM05D002693 ORTHO05D008074 1.5e-26 124.8 125 56.8
Potri.015G088500 Populus trichocarpa HOM05D002693 ORTHO05D008074 1.5e-26 124.8 125 57.6
Cfa018903 Carpinus fangiana HOM05D002693 ORTHO05D008074 2.0e-26 124.4 125 56.0
A06p19280 Brassica napus HOM05D002693 ORTHO05D008074 2.6e-26 124.0 125 56.0
MELO3C026235.2 Cucumis melo HOM05D002693 ORTHO05D008074 2.6e-26 124.0 125 55.2
Os03g0565200 Oryza sativa ssp. japonica HOM05D002693 ORTHO05D008074 2.6e-26 124.0 125 56.0
TAR622G1430 Trochodendron aralioides HOM05D002693 ORTHO05D008074 2.6e-26 124.0 125 56.0
Psat5g139480 Pisum sativum HOM05D005390 ORTHO05D007086 3.4e-26 123.6 125 56.8
Prupe.5G159800 Prunus persica HOM05D002693 ORTHO05D008074 3.4e-26 123.6 125 56.0
CANSAT80G0417 Cannabis sativa HOM05D002693 ORTHO05D008074 4.4e-26 123.2 125 56.0
RcHm_v2.0_Chr7g0191481 Rosa chinensis HOM05D002693 ORTHO05D008074 4.4e-26 123.2 125 56.0
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 5.7e-26 122.9 125 56.0
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 5.7e-26 122.9 125 56.0
AUR62001263 Chenopodium quinoa HOM05D002693 ORTHO05D008074 7.5e-26 122.5 125 54.4
Manes.06G113900 Manihot esculenta HOM05D002693 ORTHO05D008074 7.5e-26 122.5 125 56.0
Rhsim12G0171100 Rhododendron simsii HOM05D002693 ORTHO05D008074 7.5e-26 122.5 125 55.2
Gohir.D09G245600 Gossypium hirsutum HOM05D002693 ORTHO05D008074 9.8e-26 122.1 125 54.4
Aa31LG4G16990 Aethionema arabicum HOM05D002693 ORTHO05D008074 1.3e-25 121.7 125 55.2
Thecc.03G121000 Theobroma cacao HOM05D002693 ORTHO05D008074 1.3e-25 121.7 125 54.4
arahy.Tifrunner.gnm1.ann1.3ZI7DD Arachis hypogaea HOM05D002693 ORTHO05D008074 1.7e-25 121.3 125 55.2
ECA246G3621 Erigeron canadensis HOM05D002693 ORTHO05D008074 1.7e-25 121.3 125 56.0
FAN08G3291 Fragaria x ananassa HOM05D002693 ORTHO05D008074 1.7e-25 121.3 128 54.7
Gohir.A09G244700 Gossypium hirsutum HOM05D002693 ORTHO05D008074 1.7e-25 121.3 125 54.4
PSO478G4803 Papaver somniferum HOM05D002693 ORTHO05D008074 2.2e-25 120.9 137 52.6
FvH4_5g07070 Fragaria vesca HOM05D002693 ORTHO05D008074 2.8e-25 120.6 125 55.2
FAN13G1374 Fragaria x ananassa HOM05D002693 ORTHO05D008074 2.8e-25 120.6 125 55.2
FAN18G1738 Fragaria x ananassa HOM05D002693 ORTHO05D008074 2.8e-25 120.6 125 55.2
Glyma.04G191700 Glycine max HOM05D002693 ORTHO05D008074 2.8e-25 120.6 125 54.4
TPR.G38598 Trifolium pratense HOM05D002693 ORTHO05D008074 2.8e-25 120.6 125 54.4
COL.COLO4_04553 Corchorus olitorius HOM05D002693 ORTHO05D008074 3.7e-25 120.2 125 54.4
FAN04G2647 Fragaria x ananassa HOM05D002693 ORTHO05D008074 3.7e-25 120.2 125 55.2
Ah.15g095420 Amaranthus hybridus HOM05D002693 ORTHO05D008074 4.8e-25 119.8 125 52.8
EL10Ac7g18055 Beta vulgaris HOM05D002693 ORTHO05D008074 4.8e-25 119.8 125 52.8
Medtr3g075230 Medicago truncatula HOM05D002693 ORTHO05D008074 4.8e-25 119.8 125 53.6
PSO017G1659 Papaver somniferum HOM05D002693 ORTHO05D008074 4.8e-25 119.8 137 51.8
TWI23G0591 Tripterygium wilfordii HOM05D002693 ORTHO05D008074 4.8e-25 119.8 124 55.6
VMungo1309G0913 Vigna mungo HOM05D002693 ORTHO05D008074 4.8e-25 119.8 125 53.6
Aqoxy3G01325 Aquilegia oxysepala HOM05D002693 ORTHO05D008074 8.3e-25 119.0 125 54.4
DCAR_016425 Daucus carota HOM05D002693 ORTHO05D008074 8.3e-25 119.0 125 55.2
Lj1g0007454 Lotus japonicus HOM05D002693 ORTHO05D008074 1.1e-24 118.6 125 52.8
MD06G1160600 Malus domestica HOM05D002693 ORTHO05D008074 1.1e-24 118.6 125 53.6
Phvul.009G169900 Phaseolus vulgaris HOM05D002693 ORTHO05D008074 1.4e-24 118.2 125 53.6
Sc22g0003900 Simmondsia chinensis HOM05D002693 ORTHO05D008074 1.8e-24 117.9 89 68.5
ATR0824G037 Amborella trichopoda HOM05D002693 ORTHO05D008074 2.4e-24 117.5 125 53.6
Zm00001eb113090 Zea mays HOM05D002693 ORTHO05D008074 3.1e-24 117.1 125 52.8
Lsat_1_v5_gn_5_13101 Lactuca sativa HOM05D002693 ORTHO05D008074 4.1e-24 116.7 125 54.4
Prupe.5G159700 Prunus persica HOM05D002693 ORTHO05D008074 4.1e-24 116.7 125 52.8
CDE06G2530 Ceratophyllum demersum HOM05D002693 ORTHO05D008074 5.4e-24 116.3 125 53.6
Gorai.006G270000 Gossypium raimondii HOM05D002693 ORTHO05D008074 5.4e-24 116.3 123 53.7
HanXRQChr05g0156121 Helianthus annuus HOM05D002693 ORTHO05D008074 5.4e-24 116.3 125 53.6
Sed0019566 Sechium edule HOM05D002693 ORTHO05D008074 5.4e-24 116.3 125 52.8
BcaNung06062 Brassica carinata HOM05D002693 ORTHO05D008074 9.1e-24 115.5 127 54.3
HPP92_010508 Vanilla planifolia HOM05D002693 ORTHO05D008074 1.2e-23 115.2 125 52.8
Lalb_Chr11g0069751 Lupinus albus HOM05D002693 ORTHO05D008074 2.0e-23 114.4 125 52.0
arahy.Tifrunner.gnm1.ann1.V8X883 Arachis hypogaea HOM05D005390 ORTHO05D007086 1.3e-22 111.7 125 53.6
ClCG06G017610 Citrullus lanatus HOM05D002693 ORTHO05D008074 2.9e-22 110.5 82 65.9
AagrBONN_evm.TU.Sc2ySwM_362.2434 Anthoceros agrestis HOM05D002693 ORTHO05D008074 8.5e-22 109.0 125 49.6
SEGI_18096 Sequoiadendron giganteum HOM05D002693 ORTHO05D008074 1.1e-21 108.6 125 49.6
Lj5A101T102 Lonicera japonica HOM05D002693 ORTHO05D008074 2.8e-20 104.0 148 45.3
DCAR_009115 Daucus carota HOM05D002693 ORTHO05D008074 3.6e-20 103.6 80 65.0
SMO367G1130 Selaginella moellendorffii HOM05D002693 ORTHO05D008074 3.0e-19 100.5 158 40.5
Haze_07289 Corylus avellana HOM05D005390 ORTHO05D007086 5.2e-19 99.8 180 39.4
DCAR_013582 Daucus carota HOM05D002693 ORTHO05D008074 1.2e-18 98.6 73 67.1
Mapoly0082s0060 Marchantia polymorpha HOM05D002693 ORTHO05D008074 2.0e-18 97.8 81 60.5
CBR_g22462 Chara braunii HOM05D002693 ORTHO05D008074 8.3e-17 92.4 92 50.0
Pp3c10_2693 Physcomitrium patens HOM05D002693 ORTHO05D008074 8.3e-17 92.4 125 44.8
BcaB01g00813 Brassica carinata HOM05D002693 ORTHO05D008074 4.1e-16 90.1 124 45.2
vmacro16697 Vaccinium macrocarpon HOM05D002693 ORTHO05D008074 5.4e-16 89.7 141 41.1
TWI09G0096 Tripterygium wilfordii HOM05D002693 ORTHO05D008074 1.3e-14 85.1 97 50.5
DCAR_019356 Daucus carota HOM05D002693 ORTHO05D008074 1.2e-12 78.6 51 74.5
Cpa.g.sc4.47 Carica papaya HOM05D002693 ORTHO05D008074 1.2e-10 72.0 88 51.1
MCO01G793 Micromonas commoda HOM05D002693 ORTHO05D008074 1.5e-10 71.6 133 36.8
Cre03.g206550 Chlamydomonas reinhardtii HOM05D002693 ORTHO05D008074 5.7e-10 69.7 127 38.6
PRCOL_00005469 Prasinoderma coloniale HOM05D002693 ORTHO05D008074 5.4e-08 63.2 126 38.1
BcaB02g10654 Brassica carinata HOM05D002693 ORTHO05D008074 1.0e-06 58.9 84 47.6
SGA_v2.0_scaffold145G36058 Striga asiatica HOM05D000070 ORTHO05D002524 2.3e-06 57.8 32 87.5
DCAR_006073 Daucus carota HOM05D002693 ORTHO05D035002 3.0e-06 57.4 43 65.1
HanXRQChr04g0115281 Helianthus annuus HOM05D006462 ORTHO05D008067 6.6e-06 56.2 97 38.1
DCAR_007373 Daucus carota HOM05D002693 ORTHO05D035002 8.6e-06 55.8 37 75.7
RcHm_v2.0_Chr5g0027641 Rosa chinensis HOM05D002693 ORTHO05D035002 8.6e-06 55.8 37 78.4


User provided reference genes

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