Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold237G43860 Striga asiatica HOM05D006716 ORTHO05D008396 3.0e-218 761.5 378 100.0
TWI31G0239 Tripterygium wilfordii HOM05D006716 ORTHO05D008396 4.1e-50 203.0 374 34.5
Manes.S095408 Manihot esculenta HOM05D006716 ORTHO05D008396 3.5e-49 199.9 368 34.0
Hma1.2p1_0003F.1_g003620 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 9.5e-47 191.8 374 35.6
Hma1.2p1_0154F.1_g068000 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 2.1e-46 190.7 377 35.3
Duzib114G0505 Durio zibethinus HOM05D006716 ORTHO05D008396 3.0e-45 186.8 363 34.4
CSS0050127 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 4.4e-44 183.0 376 32.4
Rhsim02G0098700 Rhododendron simsii HOM05D006716 ORTHO05D008396 5.7e-44 182.6 370 31.1
Aqoxy4G01948 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 7.5e-44 182.2 365 31.0
Sopen02g027470 Solanum pennellii HOM05D006716 ORTHO05D008396 1.3e-43 181.4 392 31.6
Solyc02g082720.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 2.9e-43 180.3 392 31.6
Rhsim02G0098800 Rhododendron simsii HOM05D006716 ORTHO05D008396 8.3e-43 178.7 393 29.3
Duzib114G0774 Durio zibethinus HOM05D006716 ORTHO05D008396 1.1e-42 178.3 365 32.3
Hma1.2p1_0310F.1_g120920 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.6e-41 174.5 379 32.5
Aqoxy4G01949 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 2.3e-40 170.6 388 30.2
Peaxi162Scf00168g01523 Petunia axillaris HOM05D006716 ORTHO05D008396 5.0e-40 169.5 361 31.3
Lj9A35T20 Lonicera japonica HOM05D006716 ORTHO05D008396 4.3e-39 166.4 370 30.3
TPR.G29566 Trifolium pratense HOM05D006716 ORTHO05D008396 6.2e-38 162.5 391 31.2
DCAR_001924 Daucus carota HOM05D006716 ORTHO05D008396 8.0e-38 162.2 394 30.2
Nitab4.5_0001339g0090 Nicotiana tabacum HOM05D006716 ORTHO05D008396 8.0e-38 162.2 382 30.4
SGA_v2.0_scaffold57G20303 Striga asiatica HOM05D006716 ORTHO05D008396 1.4e-37 161.4 373 29.8
TPR.G36640 Trifolium pratense HOM05D006716 ORTHO05D008396 3.1e-37 160.2 375 29.3
TPR.G40231 Trifolium pratense HOM05D006716 ORTHO05D008396 6.8e-37 159.1 366 29.5
Rhsim01G0092600 Rhododendron simsii HOM05D006716 ORTHO05D008396 5.8e-36 156.0 347 30.3
vmacro12389 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 7.5e-36 155.6 301 33.2
Medtr5g464730 Medicago truncatula HOM05D006716 ORTHO05D008396 3.7e-35 153.3 379 29.0
Rhsim09G0048400 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.1e-34 151.8 378 29.6
Potri.018G001550 Populus trichocarpa HOM05D006716 ORTHO05D008396 4.1e-34 149.8 379 31.9
SGA_v2.0_scaffold50G18515 Striga asiatica HOM05D006716 ORTHO05D008396 5.4e-34 149.4 397 30.2
Peaxi162Scf00663g00027 Petunia axillaris HOM05D006716 ORTHO05D008396 6.0e-33 146.0 365 30.7
Duzib114G0358 Durio zibethinus HOM05D006716 ORTHO05D008396 1.0e-32 145.2 386 30.6
TPR.G15037 Trifolium pratense HOM05D006716 ORTHO05D008396 1.7e-32 144.4 344 30.2
CAN.G497.60 Capsicum annuum HOM05D006716 ORTHO05D008396 6.6e-32 142.5 372 29.8
Peaxi162Scf00475g00124 Petunia axillaris HOM05D006716 ORTHO05D008396 2.5e-31 140.6 360 28.9
DCAR_024034 Daucus carota HOM05D006716 ORTHO05D008396 3.3e-31 140.2 341 28.2
Rhsim01G0092700 Rhododendron simsii HOM05D006716 ORTHO05D008396 5.6e-31 139.4 347 29.4
Rhsim01G0093800 Rhododendron simsii HOM05D006716 ORTHO05D008396 5.6e-31 139.4 347 29.4
vmacro12393 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.2e-30 138.3 288 33.0
Potri.018G001301 Populus trichocarpa HOM05D006716 ORTHO05D008396 1.6e-30 137.9 364 28.0
Rhsim01G0093700 Rhododendron simsii HOM05D000991 ORTHO05D008396 6.2e-30 136.0 354 30.8
Peaxi162Scf00663g00009 Petunia axillaris HOM05D006716 ORTHO05D008396 5.2e-29 132.9 352 27.0
vmacro15749 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 5.2e-29 132.9 369 30.1
CSS0009954 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 8.9e-29 132.1 297 33.0
SGA_v2.0_scaffold57G20300 Striga asiatica HOM05D006716 ORTHO05D008396 2.6e-28 130.6 367 29.7
vmacro15746 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 4.4e-28 129.8 259 33.6
Medtr5g064160 Medicago truncatula HOM05D006716 ORTHO05D008396 1.7e-27 127.9 383 27.4
Peaxi162Scf00226g00716 Petunia axillaris HOM05D006716 ORTHO05D008396 1.7e-27 127.9 367 27.2
Nitab4.5_0007530g0040 Nicotiana tabacum HOM05D006716 ORTHO05D008396 2.2e-27 127.5 217 35.5
Potri.018G001500 Populus trichocarpa HOM05D006716 ORTHO05D008396 2.2e-27 127.5 438 29.5
Duzib114G0950 Durio zibethinus HOM05D006716 ORTHO05D008396 2.9e-27 127.1 233 36.5
Manes.11G055432 Manihot esculenta HOM05D006716 ORTHO05D008396 3.7e-27 126.7 227 33.5
vmacro12392 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 9.2e-26 122.1 256 28.9
CAN.G497.65 Capsicum annuum HOM05D006716 ORTHO05D008396 6.0e-25 119.4 322 27.0
DCAR_002644 Daucus carota HOM05D006716 ORTHO05D008396 1.0e-24 118.6 333 28.8
Ah.10g035290 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.7e-24 117.9 281 26.7
DCAR_001902 Daucus carota HOM05D006716 ORTHO05D008396 3.9e-24 116.7 337 25.5
Lj9A35T22 Lonicera japonica HOM05D006716 ORTHO05D008396 1.1e-23 115.2 301 31.2
Ah.10g035300 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.5e-23 114.8 338 27.2
Solyc02g082590.3 Solanum lycopersicum HOM05D006716 ORTHO05D008396 4.3e-23 113.2 208 34.6
Sopen02g027280 Solanum pennellii HOM05D006716 ORTHO05D008396 4.3e-23 113.2 210 34.3
Rhsim07G0026700 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.2e-22 111.7 350 27.7
Peaxi162Scf00038g00840 Petunia axillaris HOM05D006716 ORTHO05D008396 3.6e-22 110.2 332 26.8
Rhsim01G0093600 Rhododendron simsii HOM05D006716 ORTHO05D008396 4.7e-22 109.8 390 24.4
Peaxi162Scf00475g00024 Petunia axillaris HOM05D006716 ORTHO05D008396 1.8e-21 107.8 266 28.6
vmacro15747 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.8e-21 107.8 263 31.6
Manes.04G051500 Manihot esculenta HOM05D006716 ORTHO05D008396 1.5e-20 104.8 129 40.3
Ah.10g035360 Amaranthus hybridus HOM05D006716 ORTHO05D008396 2.6e-20 104.0 180 36.7
Peaxi162Scf00168g01520 Petunia axillaris HOM05D006716 ORTHO05D008396 9.9e-20 102.1 170 35.3
Hma1.2p1_0003F.1_g003570 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 2.2e-19 100.9 183 39.9
Lj6A58T50 Lonicera japonica HOM05D006716 ORTHO05D008396 2.2e-19 100.9 335 26.0
Ca_24998_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 1.9e-18 97.8 256 27.0
Peaxi162Scf00226g00715 Petunia axillaris HOM05D006716 ORTHO05D008396 2.4e-18 97.4 243 30.5
PSO478G1238 Papaver somniferum HOM05D006716 ORTHO05D008396 9.2e-18 95.5 374 24.6
Peaxi162Scf01072g00410 Petunia axillaris HOM05D006716 ORTHO05D008396 9.2e-18 95.5 306 24.5
PSO478G4756 Papaver somniferum HOM05D006716 ORTHO05D008396 1.6e-17 94.7 372 23.9
CAN.G497.70 Capsicum annuum HOM05D006716 ORTHO05D008396 2.1e-17 94.4 178 32.6
EL10Ac9g20945 Beta vulgaris HOM05D006716 ORTHO05D008396 6.0e-17 92.8 174 33.3
Os03g0608800 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 1.0e-16 92.0 398 21.6
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 8.7e-16 89.0 366 25.1
CAN.G497.57 Capsicum annuum HOM05D006716 ORTHO05D008396 1.9e-15 87.8 162 29.6
DCAR_001904 Daucus carota HOM05D006716 ORTHO05D008396 7.3e-15 85.9 213 28.2
Ah.10g035270 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.2e-12 78.6 187 28.9
Ah.10g035350 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.2e-12 78.6 187 28.9
Os09g0436400 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 2.0e-12 77.8 363 24.2
Peaxi162Scf00226g00717 Petunia axillaris HOM05D006716 ORTHO05D008396 4.4e-12 76.6 135 33.3
Potri.013G018300 Populus trichocarpa HOM05D005214 ORTHO05D005861 3.0e-08 63.9 313 21.4
Thecc.05G273300 Theobroma cacao HOM05D006716 ORTHO05D008396 2.5e-07 60.8 120 30.0
Nn8g40789 Nelumbo nucifera HOM05D005214 ORTHO05D005861 7.3e-07 59.3 298 24.5
Sabra13G0021100 Salix brachista HOM05D005214 ORTHO05D005861 7.3e-07 59.3 316 23.4
FAN05G5708 Fragaria x ananassa HOM05D005214 ORTHO05D005861 9.6e-07 58.9 250 19.6
vmacro04966 Vaccinium macrocarpon HOM05D005214 ORTHO05D005861 9.6e-07 58.9 313 22.4
Os03g0663100 Oryza sativa ssp. japonica HOM05D011092 ORTHO05D296914 1.6e-06 58.2 317 24.3
MD12G1215600 Malus domestica HOM05D005214 ORTHO05D005861 2.8e-06 57.4 261 21.5
Solyc02g082600.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 2.8e-06 57.4 118 31.4
CAN.G679.10 Capsicum annuum HOM05D001437 ORTHO05D001297 3.6e-06 57.0 80 38.8
Prupe.6G322200 Prunus persica HOM05D005214 ORTHO05D005861 3.6e-06 57.0 275 23.6
TPR.G12759 Trifolium pratense HOM05D006716 ORTHO05D008396 3.6e-06 57.0 305 22.0
CAN.G497.69 Capsicum annuum HOM05D003495 ORTHO05D004159 4.8e-06 56.6 113 30.1
Lsat_1_v5_gn_9_87421 Lactuca sativa HOM05D005214 ORTHO05D005861 8.1e-06 55.8 267 22.5
Medtr7g113170 Medicago truncatula HOM05D005214 ORTHO05D005861 8.1e-06 55.8 259 24.7


User provided reference genes

Program Settings