Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 2.4e-89 332.0 156 100.0
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 2.9e-66 255.4 156 75.6
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 1.7e-63 246.1 156 72.4
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 3.0e-63 245.4 156 72.4
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 4.3e-62 241.5 154 73.4
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 4.3e-62 241.5 156 72.4
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 9.6e-62 240.4 145 75.9
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 1.4e-60 236.5 156 69.9
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 3.1e-60 235.3 156 71.8
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 5.3e-60 234.6 155 72.3
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 1.2e-59 233.4 156 71.2
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 2.6e-59 232.3 156 71.2
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 2.6e-59 232.3 156 70.5
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 4.5e-59 231.5 154 69.5
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 1.3e-58 229.9 154 68.8
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 3.8e-58 228.4 156 69.2
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 3.8e-58 228.4 156 66.0
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 4.9e-58 228.0 154 68.2
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 6.4e-58 227.6 145 71.7
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 8.4e-58 227.3 156 69.2
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 1.1e-57 226.9 156 67.3
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.9e-57 226.1 156 67.9
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 1.9e-57 226.1 145 71.7
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 5.4e-57 224.6 153 68.6
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 5.4e-57 224.6 156 66.7
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 7.1e-57 224.2 156 67.9
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 7.1e-57 224.2 156 67.3
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 7.1e-57 224.2 156 67.3
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 7.1e-57 224.2 157 69.4
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 1.2e-56 223.4 148 73.0
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 1.6e-56 223.0 146 71.2
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 1.6e-56 223.0 146 71.2
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 1.6e-56 223.0 146 71.2
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 1.6e-56 223.0 147 72.8
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 2.1e-56 222.6 156 67.3
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 4.6e-56 221.5 146 71.2
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 6.0e-56 221.1 146 71.2
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 6.0e-56 221.1 145 71.0
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 1.3e-55 219.9 145 69.7
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 1.3e-55 219.9 154 67.5
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 1.8e-55 219.5 156 65.4
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.8e-55 219.5 159 66.0
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 1.8e-55 219.5 156 66.0
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 2.3e-55 219.2 144 69.4
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 2.3e-55 219.2 145 69.0
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 3.9e-55 218.4 156 66.0
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 1.5e-54 216.5 156 66.7
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 1.9e-54 216.1 145 70.3
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 2.5e-54 215.7 156 67.9
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 4.3e-54 214.9 146 69.2
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 4.3e-54 214.9 145 72.4
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 4.3e-54 214.9 156 66.7
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 2.1e-53 212.6 145 71.7
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 2.8e-53 212.2 156 65.4
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 3.7e-53 211.8 146 69.9
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 3.7e-53 211.8 145 66.9
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 4.8e-53 211.5 156 66.7
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 1.8e-52 209.5 144 68.1
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 1.8e-52 209.5 146 68.5
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 2.4e-52 209.1 156 65.4
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 3.1e-52 208.8 144 70.8
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 4.0e-52 208.4 146 67.8
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 5.3e-52 208.0 145 70.3
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 5.3e-52 208.0 145 69.0
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 1.2e-51 206.8 156 64.7
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 1.2e-51 206.8 145 70.3
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.2e-51 206.8 156 61.5
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 4.5e-51 204.9 144 67.4
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 4.9e-50 201.4 156 64.1
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.4e-49 199.9 156 63.5
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 7.1e-49 197.6 156 60.9
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 1.0e-47 193.7 135 68.9
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 4.8e-45 184.9 157 59.2
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 4.0e-44 181.8 135 65.9
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 3.5e-40 168.7 158 51.9
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 6.0e-40 167.9 152 53.3
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 7.9e-40 167.5 158 51.3
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 1.3e-39 166.8 158 50.6
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 1.3e-39 166.8 158 50.6
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 3.0e-39 165.6 154 51.3
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 3.9e-39 165.2 156 50.6
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 5.1e-39 164.9 158 50.0
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 1.5e-38 163.3 158 49.4
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 1.5e-38 163.3 158 49.4
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 1.5e-38 163.3 158 49.4
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 1.9e-38 162.9 161 52.8
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 2.5e-38 162.5 154 50.6
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.2e-32 143.7 119 58.0
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 1.5e-30 136.7 134 50.7
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 3.3e-30 135.6 134 51.5
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 1.5e-27 126.7 144 45.8
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 1.7e-26 123.2 74 73.0
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 1.5e-22 110.2 65 80.0
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 2.4e-20 102.8 74 67.6
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 2.6e-19 99.4 69 68.1
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 6.5e-18 94.7 73 68.5
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 8.8e-15 84.3 123 38.2
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 9.7e-14 80.9 123 36.6


User provided reference genes

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