Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold234G43644 Striga asiatica HOM05D014194 ORTHO05D014656 2.3e-193 678.7 339 100.0
SGA_v2.0_scaffold45G17028 Striga asiatica HOM05D014194 ORTHO05D014656 7.8e-93 344.7 200 85.5
SGA_v2.0_scaffold111G31470 Striga asiatica HOM05D014194 ORTHO05D014656 1.8e-81 307.0 292 58.9
SGA_v2.0_scaffold47G17527 Striga asiatica HOM05D014194 ORTHO05D014656 6.9e-65 251.9 138 87.7
SGA_v2.0_scaffold25G10791 Striga asiatica HOM05D014194 ORTHO05D014656 1.0e-44 184.9 135 71.9
SGA_v2.0_scaffold60G20820 Striga asiatica HOM05D014194 ORTHO05D014656 8.8e-44 181.8 102 86.3
SGA_v2.0_scaffold30G12521 Striga asiatica HOM05D014194 ORTHO05D014656 1.2e-37 161.4 105 77.1
SGA_v2.0_scaffold113G31794 Striga asiatica HOM05D014194 ORTHO05D014656 7.7e-32 142.1 80 86.2
SGA_v2.0_scaffold154G37101 Striga asiatica HOM05D014194 ORTHO05D014656 2.4e-25 120.6 79 77.2
SGA_v2.0_scaffold8G04271 Striga asiatica HOM05D011878 ORTHO05D011270 2.8e-21 107.1 296 29.4
SGA_v2.0_scaffold113G31792 Striga asiatica HOM05D014194 ORTHO05D014656 4.9e-18 96.3 60 76.7
Oeu064496.1 Olea europaea HOM05D000045 ORTHO05D011270 4.5e-16 89.7 156 35.9
Oeu024598.1 Olea europaea HOM05D000045 ORTHO05D014656 3.9e-15 86.7 102 43.1
Oeu041131.1 Olea europaea HOM05D000045 ORTHO05D011270 6.6e-15 85.9 102 44.1
SGA_v2.0_scaffold16G07519 Striga asiatica HOM05D011878 ORTHO05D011270 9.5e-14 82.0 271 30.6
SGA_v2.0_scaffold185G40051 Striga asiatica HOM05D011878 ORTHO05D011270 1.6e-13 81.3 267 30.0
Oeu032610.1 Olea europaea HOM05D000045 ORTHO05D000611 2.3e-12 77.4 115 40.0
TWI53G1228 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-11 75.1 99 39.4
TWI56G0811 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-11 75.1 99 39.4
vmacro19315 Vaccinium macrocarpon HOM05D000045 ORTHO05D014656 2.0e-11 74.3 199 28.6
TWI53G2134 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.5e-11 72.4 99 40.4
TWI79G0465 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.5e-11 72.4 99 40.4
TWI14G1038 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.8e-11 72.0 99 40.4
TWI14G0214 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.3e-10 71.6 100 38.0
Aqoxy3G00990 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.7e-10 71.2 98 42.9
Aqoxy4G01093 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.7e-10 71.2 98 42.9
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.7e-10 71.2 98 42.9
TWI38G1085 Tripterygium wilfordii HOM05D000045 ORTHO05D011270 1.7e-10 71.2 303 23.8
Rhsim06G0088300 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.2e-10 70.9 145 33.1
Atru.chr4.2354 Acer truncatum HOM05D000045 ORTHO05D000067 3.7e-10 70.1 104 42.3
Aqoxy7G02429 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.9e-10 69.7 98 41.8
Atru.chr4.2343 Acer truncatum HOM05D000045 ORTHO05D000067 8.3e-10 68.9 104 42.3
Aqoxy4G01738 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.4e-09 67.4 98 38.8
FvH4_4g27332 Fragaria vesca HOM05D017263 ORTHO05D020626 2.4e-09 67.4 288 27.1
Rhsim09G0080800 Rhododendron simsii HOM05D000045 ORTHO05D011270 3.2e-09 67.0 116 36.2
SGA_v2.0_scaffold10G05309 Striga asiatica HOM05D011878 ORTHO05D011270 5.4e-09 66.2 154 29.9
TWI38G1028 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 5.4e-09 66.2 99 36.4
Prupe.1G074100 Prunus persica HOM05D014194 ORTHO05D011270 7.0e-09 65.9 76 43.4
TWI74G0282 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.0e-09 65.9 99 35.4
SGA_v2.0_scaffold177G39432 Striga asiatica HOM05D011878 ORTHO05D011270 9.2e-09 65.5 222 26.6
Prupe.3G021400 Prunus persica HOM05D000045 ORTHO05D000611 1.2e-08 65.1 101 39.6
Rhsim02G0171700 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.6e-08 64.7 128 34.4
TWI60G1709 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.0e-08 64.3 99 35.4
TWI31G1262 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.0e-08 62.8 99 34.3
Rhsim08G0146600 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.0e-07 62.0 100 36.0
SGA_v2.0_scaffold57G20196 Striga asiatica HOM05D011878 ORTHO05D011270 1.7e-07 61.2 174 31.6
MBI07_g18522_MAGBIO Magnolia biondii HOM05D057054 ORTHO05D014656 3.0e-07 60.5 105 38.1
Rhsim06G0086700 Rhododendron simsii HOM05D000045 ORTHO05D010036 3.9e-07 60.1 176 26.1
RcHm_v2.0_Chr4g0405981 Rosa chinensis HOM05D000045 ORTHO05D000067 3.9e-07 60.1 98 36.7
C02p57720 Brassica napus HOM05D000045 ORTHO05D001346 5.0e-07 59.7 87 36.8
BolC2t11844H Brassica oleracea HOM05D000045 ORTHO05D001346 5.0e-07 59.7 87 36.8
Ciclev10013881m.g Citrus clementina HOM05D000045 ORTHO05D000067 5.0e-07 59.7 168 31.5
THA.LOC104819036 Tarenaya hassleriana HOM05D000045 ORTHO05D001346 6.6e-07 59.3 118 33.1
Atru.chr3.2698 Acer truncatum HOM05D000045 ORTHO05D000067 1.5e-06 58.2 118 31.4
Lalb_Chr09g0328211 Lupinus albus HOM05D000045 ORTHO05D000067 1.5e-06 58.2 90 40.0
arahy.Tifrunner.gnm1.ann1.1078FM Arachis hypogaea HOM05D005194 ORTHO05D003357 2.5e-06 57.4 99 41.4
Rhsim02G0126800 Rhododendron simsii HOM05D009480 ORTHO05D010036 3.3e-06 57.0 249 25.7
AUR62002424 Chenopodium quinoa HOM05D000045 ORTHO05D001346 4.3e-06 56.6 85 34.1
Rhsim03G0080800 Rhododendron simsii HOM05D000045 ORTHO05D010036 4.3e-06 56.6 182 28.0
Rhsim07G0160800 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.3e-06 56.6 182 28.0
Rhsim07G0161600 Rhododendron simsii HOM05D000045 ORTHO05D010036 4.3e-06 56.6 192 28.6
THA.LOC104824729 Tarenaya hassleriana HOM05D000045 ORTHO05D000067 4.3e-06 56.6 108 33.3
Ciclev10018239m.g Citrus clementina HOM05D000045 ORTHO05D000611 5.6e-06 56.2 87 35.6
Rhsim05G0110700 Rhododendron simsii HOM05D000045 ORTHO05D011270 5.6e-06 56.2 114 30.7
Lj5g0021168 Lotus japonicus HOM05D000045 ORTHO05D000695 7.3e-06 55.8 76 36.8
MBI06_g15025_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000611 9.5e-06 55.5 98 35.7


User provided reference genes

Program Settings