Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold234G43604 Striga asiatica HOM05D004074 ORTHO05D405016 1.9e-77 292.4 142 100.0
Nitab4.5_0002885g0120 Nicotiana tabacum HOM05D004074 ORTHO05D004717 2.1e-07 59.7 81 38.3
MBI14_g24286_MAGBIO Magnolia biondii HOM05D004074 ORTHO05D004717 6.1e-07 58.2 37 70.3
SGA_v2.0_scaffold122G33290 Striga asiatica HOM05D004074 ORTHO05D004717 6.1e-07 58.2 31 77.4
FAN14G4331 Fragaria x ananassa HOM05D004074 ORTHO05D004717 8.0e-07 57.8 32 71.9
Nn6g31693 Nelumbo nucifera HOM05D004074 ORTHO05D004717 8.0e-07 57.8 31 74.2
Nn8g40291 Nelumbo nucifera HOM05D004074 ORTHO05D004717 8.0e-07 57.8 31 74.2
Os08g0250200 Oryza sativa ssp. japonica HOM05D004074 ORTHO05D004717 1.0e-06 57.4 32 75.0
HPP92_021730 Vanilla planifolia HOM05D004074 ORTHO05D004717 1.0e-06 57.4 38 65.8
Actinidia21867 Actinidia chinensis HOM05D004074 ORTHO05D004717 1.4e-06 57.0 32 68.8
A08p02600 Brassica napus HOM05D004074 ORTHO05D004717 1.8e-06 56.6 32 71.9
BraA08t32299Z Brassica rapa HOM05D004074 ORTHO05D004717 1.8e-06 56.6 32 71.9
Ciclev10026787m.g Citrus clementina HOM05D004074 ORTHO05D004717 1.8e-06 56.6 37 62.2
PGSC0003DMG402009187 Solanum tuberosum HOM05D004074 ORTHO05D004717 1.8e-06 56.6 31 74.2
vmacro18761 Vaccinium macrocarpon HOM05D004074 ORTHO05D004717 1.8e-06 56.6 31 71.0
Actinidia38792 Actinidia chinensis HOM05D004074 ORTHO05D004717 2.3e-06 56.2 31 71.0
COL.COLO4_13992 Corchorus olitorius HOM05D004074 ORTHO05D004717 2.3e-06 56.2 31 74.2
FvH4_6g37330 Fragaria vesca HOM05D004074 ORTHO05D004717 2.3e-06 56.2 31 71.0
FAN02G0872 Fragaria x ananassa HOM05D004074 ORTHO05D004717 2.3e-06 56.2 31 71.0
FAN05G0051 Fragaria x ananassa HOM05D004074 ORTHO05D004717 2.3e-06 56.2 31 71.0
FAN09G3199 Fragaria x ananassa HOM05D004074 ORTHO05D004717 2.3e-06 56.2 31 71.0
Nn5g30428 Nelumbo nucifera HOM05D004074 ORTHO05D004717 2.3e-06 56.2 31 71.0
Solyc06g063220.3 Solanum lycopersicum HOM05D004074 ORTHO05D004717 2.3e-06 56.2 31 74.2
Sopen06g022670 Solanum pennellii HOM05D004074 ORTHO05D004717 2.3e-06 56.2 31 74.2
Actinidia00635 Actinidia chinensis HOM05D004074 ORTHO05D004717 3.0e-06 55.8 31 71.0
Actinidia25993 Actinidia chinensis HOM05D004074 ORTHO05D004717 3.0e-06 55.8 31 71.0
BcaB04g17185 Brassica carinata HOM05D004074 ORTHO05D004717 3.0e-06 55.8 32 71.9
Cpa.g.sc1009.1 Carica papaya HOM05D004074 ORTHO05D004717 3.0e-06 55.8 31 71.0
Peaxi162Scf00038g02442 Petunia axillaris HOM05D004074 ORTHO05D004717 3.0e-06 55.8 31 71.0
Sp1g38290 Schrenkiella parvula HOM05D004074 ORTHO05D004717 3.0e-06 55.8 40 60.0
AL1G59560 Arabidopsis lyrata HOM05D004074 ORTHO05D004717 4.0e-06 55.5 32 65.6
AT1G51650 Arabidopsis thaliana HOM05D004074 ORTHO05D004717 4.0e-06 55.5 32 65.6
BcaC03g13642 Brassica carinata HOM05D000239 ORTHO05D004717 4.0e-06 55.5 47 48.9
CARHR041810 Cardamine hirsuta HOM05D004074 ORTHO05D004717 4.0e-06 55.5 32 65.6
Haze_03743 Corylus avellana HOM05D004074 ORTHO05D004717 4.0e-06 55.5 31 71.0
Eucgr.F04009 Eucalyptus grandis HOM05D004074 ORTHO05D004717 4.0e-06 55.5 32 68.8
HanXRQChr10g0311531 Helianthus annuus HOM05D004074 ORTHO05D004717 4.0e-06 55.5 31 67.7
Nitab4.5_0001691g0090 Nicotiana tabacum HOM05D004074 ORTHO05D004717 4.0e-06 55.5 33 63.6
ATR0580G305 Amborella trichopoda HOM05D004074 ORTHO05D004717 5.2e-06 55.1 33 60.6
Carub.0001s4049 Capsella rubella HOM05D004074 ORTHO05D004717 5.2e-06 55.1 32 62.5
Duzib147G0570 Durio zibethinus HOM05D004074 ORTHO05D004717 5.2e-06 55.1 31 71.0
Duzib264G1024 Durio zibethinus HOM05D004074 ORTHO05D004717 5.2e-06 55.1 31 71.0
ECA234G0987 Erigeron canadensis HOM05D004074 ORTHO05D004717 5.2e-06 55.1 31 67.7
Gohir.A11G055200 Gossypium hirsutum HOM05D004074 ORTHO05D004717 5.2e-06 55.1 31 71.0
Gohir.D11G059000 Gossypium hirsutum HOM05D004074 ORTHO05D004717 5.2e-06 55.1 31 71.0
Gohir.D12G001400 Gossypium hirsutum HOM05D004074 ORTHO05D004717 5.2e-06 55.1 31 71.0
Gorai.007G063900 Gossypium raimondii HOM05D004074 ORTHO05D004717 5.2e-06 55.1 31 71.0
Gorai.008G000800 Gossypium raimondii HOM05D004074 ORTHO05D004717 5.2e-06 55.1 31 71.0
Nitab4.5_0002661g0050 Nicotiana tabacum HOM05D004074 ORTHO05D004717 5.2e-06 55.1 31 67.7
Nitab4.5_0008628g0040 Nicotiana tabacum HOM05D004074 ORTHO05D004717 5.2e-06 55.1 31 67.7
Rhsim08G0247900 Rhododendron simsii HOM05D004074 ORTHO05D004717 5.2e-06 55.1 32 65.6
PGSC0003DMG400026508 Solanum tuberosum HOM05D004074 ORTHO05D004717 5.2e-06 55.1 31 71.0
BolC8t49078H Brassica oleracea HOM05D004074 ORTHO05D004717 6.8e-06 54.7 54 44.4
CSS0037999 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 6.8e-06 54.7 32 65.6
CSS0039874 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 6.8e-06 54.7 32 65.6
CiPaw.01G088100 Carya illinoinensis HOM05D004074 ORTHO05D004717 6.8e-06 54.7 31 67.7
CDE02G0689 Ceratophyllum demersum HOM05D004074 ORTHO05D004717 6.8e-06 54.7 32 65.6
Oeu040350.2 Olea europaea HOM05D004074 ORTHO05D004717 6.8e-06 54.7 33 60.6
PGR102G2231 Punica granatum HOM05D004074 ORTHO05D004717 6.8e-06 54.7 32 65.6
Thecc.01G124200 Theobroma cacao HOM05D004074 ORTHO05D004717 6.8e-06 54.7 31 71.0
unitig_748.g7476 Utricularia gibba HOM05D004074 ORTHO05D004717 6.8e-06 54.7 32 65.6
BraA01t03480Z Brassica rapa HOM05D004074 ORTHO05D004717 8.9e-06 54.3 33 57.6
Migut.I01175 Erythranthe guttata HOM05D004074 ORTHO05D004717 8.9e-06 54.3 32 65.6
Lsat_1_v5_gn_4_88780 Lactuca sativa HOM05D004074 ORTHO05D004717 8.9e-06 54.3 31 67.7
Lj3g0011227 Lotus japonicus HOM05D004074 ORTHO05D004717 8.9e-06 54.3 31 67.7
Sopen12g024230 Solanum pennellii HOM05D004074 ORTHO05D004717 8.9e-06 54.3 31 67.7
PGSC0003DMG400028842 Solanum tuberosum HOM05D004074 ORTHO05D004717 8.9e-06 54.3 31 67.7
THA.LOC104821596 Tarenaya hassleriana HOM05D004074 ORTHO05D004717 8.9e-06 54.3 31 67.7


User provided reference genes

Program Settings