Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold232G43549 Striga asiatica HOM05D002242 ORTHO05D002275 2.6e-115 418.7 206 100.0
MSTRG.28269 Avicennia marina HOM05D002242 ORTHO05D002275 3.6e-32 142.5 219 47.9
SalBow5G1307 Salvia bowleyana HOM05D002242 ORTHO05D002275 1.3e-29 134.0 191 50.3
Migut.O00897 Erythranthe guttata HOM05D002242 ORTHO05D002275 4.9e-29 132.1 220 42.7
MSTRG.17354 Avicennia marina HOM05D002242 ORTHO05D002275 2.4e-28 129.8 217 43.8
Migut.N01536 Erythranthe guttata HOM05D002242 ORTHO05D002275 5.9e-27 125.2 142 52.1
Cc02_g39550 Coffea canephora HOM05D002242 ORTHO05D002275 1.3e-21 107.5 216 44.0
Oeu043226.1 Olea europaea HOM05D002242 ORTHO05D002275 1.3e-21 107.5 207 41.5
SalBow3G1264 Salvia bowleyana HOM05D002242 ORTHO05D002275 1.8e-20 103.6 218 40.4
Hma1.2p1_0390F.1_g142630 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 6.0e-19 98.6 242 38.8
Oeu007879.1 Olea europaea HOM05D002242 ORTHO05D002275 7.8e-19 98.2 194 39.7
GSVIVG01027167001 Vitis vinifera HOM05D002242 ORTHO05D002275 1.0e-18 97.8 219 37.9
Oeu004983.1 Olea europaea HOM05D002242 ORTHO05D002275 2.3e-18 96.7 199 43.2
Dinv34219 Davidia involucrata HOM05D002242 ORTHO05D002275 1.5e-17 94.0 214 39.3
SGA_v2.0_scaffold22G09962 Striga asiatica HOM05D002242 ORTHO05D002275 1.5e-17 94.0 218 37.2
Gohir.A11G097800 Gossypium hirsutum HOM05D002242 ORTHO05D002275 1.6e-16 90.5 200 40.0
Peaxi162Scf00087g02228 Petunia axillaris HOM05D002242 ORTHO05D002275 2.8e-16 89.7 186 40.9
Duzib138G1576 Durio zibethinus HOM05D002242 ORTHO05D002275 3.6e-16 89.4 224 38.4
Gohir.D11G102500 Gossypium hirsutum HOM05D002242 ORTHO05D002275 4.7e-16 89.0 200 39.5
TAR636G3588 Trochodendron aralioides HOM05D002242 ORTHO05D002275 1.1e-15 87.8 215 37.7
Actinidia28112 Actinidia chinensis HOM05D002242 ORTHO05D002275 1.4e-15 87.4 179 43.0
TAR425G0001 Trochodendron aralioides HOM05D002242 ORTHO05D002275 1.4e-15 87.4 208 40.9
COL.COLO4_06225 Corchorus olitorius HOM05D002242 ORTHO05D002275 3.1e-15 86.3 185 38.9
MD07G1152200 Malus domestica HOM05D002242 ORTHO05D002275 3.1e-15 86.3 182 41.8
Solyc01g096080.3 Solanum lycopersicum HOM05D002242 ORTHO05D002275 4.0e-15 85.9 166 38.6
PGSC0003DMG400000119 Solanum tuberosum HOM05D002242 ORTHO05D002275 4.0e-15 85.9 170 39.4
Thecc.01G340500 Theobroma cacao HOM05D002242 ORTHO05D002275 4.0e-15 85.9 226 38.1
Lsat_1_v5_gn_4_33660 Lactuca sativa HOM05D002242 ORTHO05D002275 5.2e-15 85.5 108 48.1
Lsat_1_v5_gn_6_85600 Lactuca sativa HOM05D002242 ORTHO05D002275 8.9e-15 84.7 108 47.2
Sopen01g039800 Solanum pennellii HOM05D002242 ORTHO05D002275 8.9e-15 84.7 166 38.6
Sabra02G0140300 Salix brachista HOM05D002242 ORTHO05D002275 1.2e-14 84.3 186 39.8
Actinidia20250 Actinidia chinensis HOM05D002242 ORTHO05D002275 1.5e-14 84.0 225 37.3
vmacro13169 Vaccinium macrocarpon HOM05D002242 ORTHO05D002275 2.0e-14 83.6 154 42.2
Prupe.2G190500 Prunus persica HOM05D002242 ORTHO05D002275 2.6e-14 83.2 154 42.2
Glyma.07G054700 Glycine max HOM05D002242 ORTHO05D002275 3.4e-14 82.8 198 37.9
HanXRQChr16g0524311 Helianthus annuus HOM05D002242 ORTHO05D002275 4.4e-14 82.4 202 36.6
MD01G1083500 Malus domestica HOM05D002242 ORTHO05D002275 5.8e-14 82.0 182 40.7
Nitab4.5_0004497g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 5.8e-14 82.0 110 50.0
CANSAT56G1040 Cannabis sativa HOM05D002242 ORTHO05D002275 7.5e-14 81.6 223 38.6
Glyma.16G023500 Glycine max HOM05D002242 ORTHO05D002275 7.5e-14 81.6 198 37.9
Actinidia07972 Actinidia chinensis HOM05D002242 ORTHO05D002275 9.8e-14 81.3 225 38.7
Ciclev10021650m.g Citrus clementina HOM05D002242 ORTHO05D002275 9.8e-14 81.3 227 34.8
Dinv32603 Davidia involucrata HOM05D002242 ORTHO05D002275 9.8e-14 81.3 201 40.3
Nitab4.5_0001763g0050 Nicotiana tabacum HOM05D002242 ORTHO05D002275 9.8e-14 81.3 87 54.0
Peaxi162Scf00345g00124 Petunia axillaris HOM05D002242 ORTHO05D002275 9.8e-14 81.3 203 37.4
Potri.002G172900 Populus trichocarpa HOM05D002242 ORTHO05D002275 9.8e-14 81.3 195 39.5
unitig_899.g14793 Utricularia gibba HOM05D002242 ORTHO05D002275 9.8e-14 81.3 208 37.0
Gorai.007G109600 Gossypium raimondii HOM05D002242 ORTHO05D002275 2.2e-13 80.1 163 41.1
Migut.B01887 Erythranthe guttata HOM05D002242 ORTHO05D002275 2.9e-13 79.7 234 36.3
Atru.chr5.685 Acer truncatum HOM05D002242 ORTHO05D002275 3.7e-13 79.3 234 35.9
DCAR_025263 Daucus carota HOM05D002242 ORTHO05D002275 3.7e-13 79.3 150 44.7
Lj3g0010764 Lotus japonicus HOM05D002242 ORTHO05D002275 4.9e-13 79.0 131 42.0
Nitab4.5_0003046g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 6.4e-13 78.6 187 38.5
Hund27189 Selenicereus undatus HOM05D002242 ORTHO05D002275 6.4e-13 78.6 163 39.9
Manes.05G021600 Manihot esculenta HOM05D002242 ORTHO05D002275 8.3e-13 78.2 171 37.4
CSS0021112 Camellia sinensis var. sinensis HOM05D002242 ORTHO05D002275 1.9e-12 77.0 205 35.1
CAN.G1415.21 Capsicum annuum HOM05D002242 ORTHO05D002275 1.9e-12 77.0 187 37.4
FAN10G2930 Fragaria x ananassa HOM05D002242 ORTHO05D002275 1.9e-12 77.0 221 37.6
FAN10G3865 Fragaria x ananassa HOM05D002242 ORTHO05D002275 1.9e-12 77.0 219 37.4
Oeu004958.1 Olea europaea HOM05D002242 ORTHO05D002275 2.4e-12 76.6 211 36.5
RcHm_v2.0_Chr1g0360071 Rosa chinensis HOM05D002242 ORTHO05D002275 2.4e-12 76.6 192 38.0
Hma1.2p1_0404F.1_g145270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 3.2e-12 76.3 209 37.8
FvH4_7g16850 Fragaria vesca HOM05D002242 ORTHO05D002275 4.1e-12 75.9 220 36.8
FAN06G0152 Fragaria x ananassa HOM05D002242 ORTHO05D002275 4.1e-12 75.9 220 36.8
Hma1.2p1_1587F.1_g292270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 4.1e-12 75.9 208 37.5
TWI14G0218 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 4.1e-12 75.9 228 37.3
TWI23G0291 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 4.1e-12 75.9 228 36.8
FAN06G1161 Fragaria x ananassa HOM05D002242 ORTHO05D002275 5.4e-12 75.5 221 37.6
TWI59G0079 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 5.4e-12 75.5 221 35.3
Haze_00202 Corylus avellana HOM05D002242 ORTHO05D002275 9.2e-12 74.7 212 36.3
FAN01G2189 Fragaria x ananassa HOM05D002242 ORTHO05D002275 9.2e-12 74.7 207 39.1
FAN03G2616 Fragaria x ananassa HOM05D002242 ORTHO05D002275 9.2e-12 74.7 194 38.1
QL09p008666 Quercus lobata HOM05D002242 ORTHO05D002275 1.2e-11 74.3 199 36.7
Sc01g0002560 Simmondsia chinensis HOM05D002242 ORTHO05D002275 1.2e-11 74.3 201 36.3
Nitab4.5_0010712g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 1.6e-11 73.9 187 38.0
Ah.05g179410 Amaranthus hybridus HOM05D002242 ORTHO05D002275 2.7e-11 73.2 159 42.8
Hma1.2p1_0101F.1_g049310 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 2.7e-11 73.2 145 41.4
Medtr8g027435 Medicago truncatula HOM05D002242 ORTHO05D002275 3.5e-11 72.8 100 47.0
ClCG01G000400 Citrullus lanatus HOM05D002242 ORTHO05D002275 4.6e-11 72.4 144 40.3
QL08p045696 Quercus lobata HOM05D002242 ORTHO05D002275 4.6e-11 72.4 201 37.3
Lalb_Chr17g0342761 Lupinus albus HOM05D002242 ORTHO05D002275 6.0e-11 72.0 107 43.0
EL10Ac1g00249 Beta vulgaris HOM05D002242 ORTHO05D002275 7.8e-11 71.6 185 37.3
DCAR_005401 Daucus carota HOM05D002242 ORTHO05D002275 7.8e-11 71.6 209 36.4
Manes.01G244900 Manihot esculenta HOM05D002242 ORTHO05D002275 1.0e-10 71.2 161 39.1
Rhsim01G0174300 Rhododendron simsii HOM05D002242 ORTHO05D002275 1.0e-10 71.2 192 36.5
ECA234G4607 Erigeron canadensis HOM05D002242 ORTHO05D002275 1.3e-10 70.9 71 59.2
Gohir.A12G249200 Gossypium hirsutum HOM05D002242 ORTHO05D002275 1.3e-10 70.9 204 35.8
HanXRQChr17g0563391 Helianthus annuus HOM05D002242 ORTHO05D002275 1.3e-10 70.9 127 41.7
Oeu060992.1 Olea europaea HOM05D002242 ORTHO05D002275 1.3e-10 70.9 132 40.9
Peaxi162Scf00716g00032 Petunia axillaris HOM05D000078 ORTHO05D000025 1.3e-10 70.9 205 36.1
Rhsim07G0003200 Rhododendron simsii HOM05D002242 ORTHO05D002275 1.7e-10 70.5 97 47.4
Cfa016239 Carpinus fangiana HOM05D002242 ORTHO05D002275 2.3e-10 70.1 220 33.6
AUR62004507 Chenopodium quinoa HOM05D002242 ORTHO05D002275 2.3e-10 70.1 197 37.1
Psat4g214600 Pisum sativum HOM05D002242 ORTHO05D002275 6.6e-10 68.6 97 45.4
vmacro06390 Vaccinium macrocarpon HOM05D002242 ORTHO05D002275 6.6e-10 68.6 108 41.7
Gorai.008G126300 Gossypium raimondii HOM05D002242 ORTHO05D002275 8.6e-10 68.2 169 38.5
Sabra14G0073600 Salix brachista HOM05D002242 ORTHO05D002275 8.6e-10 68.2 232 33.6
CiPaw.01G077500 Carya illinoinensis HOM05D002242 ORTHO05D002275 1.1e-09 67.8 224 33.5
Haze_15674 Corylus avellana HOM05D002242 ORTHO05D002275 1.1e-09 67.8 177 37.3
Gohir.D12G250000 Gossypium hirsutum HOM05D002242 ORTHO05D002275 1.1e-09 67.8 204 34.8
Nn1g00284 Nelumbo nucifera HOM05D002242 ORTHO05D002275 1.1e-09 67.8 189 35.4
Actinidia08657 Actinidia chinensis HOM05D002242 ORTHO05D002275 1.9e-09 67.0 108 45.4
Rhsim03G0209500 Rhododendron simsii HOM05D002242 ORTHO05D002275 1.9e-09 67.0 96 42.7
Dinv37328 Davidia involucrata HOM05D002242 ORTHO05D002275 2.5e-09 66.6 73 53.4
Gorai.008G268100 Gossypium raimondii HOM05D002242 ORTHO05D002275 2.5e-09 66.6 204 35.3
Manes.02G144300 Manihot esculenta HOM05D002242 ORTHO05D002275 4.3e-09 65.9 206 34.0
Duzib084G0563 Durio zibethinus HOM05D002242 ORTHO05D002275 5.6e-09 65.5 173 36.4
Gohir.A12G113100 Gossypium hirsutum HOM05D002242 ORTHO05D002275 5.6e-09 65.5 169 37.3
Dinv29268 Davidia involucrata HOM05D002242 ORTHO05D002275 9.5e-09 64.7 218 34.4
PSO782G1347 Papaver somniferum HOM05D002242 ORTHO05D002275 9.5e-09 64.7 148 37.8
Thecc.03G200400 Theobroma cacao HOM05D002242 ORTHO05D002275 9.5e-09 64.7 221 35.3
Gohir.D12G116600 Gossypium hirsutum HOM05D002242 ORTHO05D002275 1.2e-08 64.3 169 37.9
PSO478G1176 Papaver somniferum HOM05D002242 ORTHO05D002275 1.2e-08 64.3 148 37.8
Lalb_Chr10g0100621 Lupinus albus HOM05D002242 ORTHO05D002275 1.6e-08 63.9 119 35.3
unitig_62.g23788 Utricularia gibba HOM05D002242 ORTHO05D002275 1.6e-08 63.9 165 36.4
Potri.014G100200 Populus trichocarpa HOM05D002242 ORTHO05D002275 2.1e-08 63.5 250 32.8
TPR.G20223 Trifolium pratense HOM05D002242 ORTHO05D002275 3.6e-08 62.8 107 43.0
FAN01G0248 Fragaria x ananassa HOM05D002242 ORTHO05D002275 4.7e-08 62.4 100 42.0
FAN03G3456 Fragaria x ananassa HOM05D002242 ORTHO05D002275 4.7e-08 62.4 151 35.8
VMungo0647G2336 Vigna mungo HOM05D002242 ORTHO05D002275 4.7e-08 62.4 162 37.7
Eucgr.H01540 Eucalyptus grandis HOM05D002242 ORTHO05D002275 6.2e-08 62.0 199 35.7
Eucgr.H01594 Eucalyptus grandis HOM05D002242 ORTHO05D002275 6.2e-08 62.0 199 35.7
Glyma.04G234700 Glycine max HOM05D002242 ORTHO05D002275 6.2e-08 62.0 173 33.5
Potri.015G011900 Populus trichocarpa HOM05D002242 ORTHO05D002275 6.2e-08 62.0 102 43.1
Phvul.009G051700 Phaseolus vulgaris HOM05D002242 ORTHO05D002275 8.1e-08 61.6 77 53.2
Psat3g001920 Pisum sativum HOM05D002242 ORTHO05D002275 8.1e-08 61.6 118 35.6
Aqoxy4G02751 Aquilegia oxysepala HOM05D002242 ORTHO05D002275 1.1e-07 61.2 216 34.7
CiPaw.06G045500 Carya illinoinensis HOM05D002242 ORTHO05D002275 1.1e-07 61.2 216 34.7
Gorai.001G153800 Gossypium raimondii HOM05D002242 ORTHO05D002275 1.4e-07 60.8 196 33.2
unitig_22.g6818 Utricularia gibba HOM05D002242 ORTHO05D002275 1.4e-07 60.8 149 36.2
Ciclev10021848m.g Citrus clementina HOM05D002242 ORTHO05D002275 1.8e-07 60.5 104 43.3
Duzib205G1627 Durio zibethinus HOM05D002242 ORTHO05D002275 1.8e-07 60.5 178 33.7
Gohir.D07G142066 Gossypium hirsutum HOM05D002242 ORTHO05D002275 1.8e-07 60.5 196 33.2
Lj4g0010373 Lotus japonicus HOM05D002242 ORTHO05D002275 2.3e-07 60.1 106 40.6
SGA_v2.0_scaffold44G16810 Striga asiatica HOM05D002242 ORTHO05D002275 2.3e-07 60.1 109 40.4
Glyma.06G129800 Glycine max HOM05D002242 ORTHO05D002275 3.1e-07 59.7 88 44.3
MBI06_g38007_MAGBIO Magnolia biondii HOM05D002242 ORTHO05D002275 3.1e-07 59.7 218 33.0
THA.LOC104811912 Tarenaya hassleriana HOM05D002242 ORTHO05D002275 3.1e-07 59.7 126 36.5
FvH4_7g31360 Fragaria vesca HOM05D002242 ORTHO05D002275 4.0e-07 59.3 142 38.7
FAN06G3788 Fragaria x ananassa HOM05D002242 ORTHO05D002275 4.0e-07 59.3 142 38.7
Phvul.001G075100 Phaseolus vulgaris HOM05D002242 ORTHO05D002275 4.0e-07 59.3 104 42.3
Ca_12786_v3 Cicer arietinum L. HOM05D002242 ORTHO05D002275 5.2e-07 58.9 74 48.6
Ca_12789_v3 Cicer arietinum L. HOM05D002242 ORTHO05D002275 5.2e-07 58.9 74 48.6
TWI39G0876 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 5.2e-07 58.9 73 50.7
EL10Ac3g05266 Beta vulgaris HOM05D002242 ORTHO05D002275 6.8e-07 58.5 112 42.9
Cpa.g.sc96.41 Carica papaya HOM05D002242 ORTHO05D002275 6.8e-07 58.5 202 32.7
Migut.F01023 Erythranthe guttata HOM05D002242 ORTHO05D002275 8.9e-07 58.2 108 38.9
Gohir.A07G136800 Gossypium hirsutum HOM05D002242 ORTHO05D002275 8.9e-07 58.2 189 32.8
Medtr7g117695 Medicago truncatula HOM05D002242 ORTHO05D002275 8.9e-07 58.2 130 36.9
PGR142G4389 Punica granatum HOM05D002242 ORTHO05D002275 1.2e-06 57.8 177 36.2
Sp6g01185 Schrenkiella parvula HOM05D002242 ORTHO05D002275 1.2e-06 57.8 213 32.4
Eucgr.E00045 Eucalyptus grandis HOM05D002242 ORTHO05D002275 2.0e-06 57.0 100 41.0
Medtr1g007905 Medicago truncatula HOM05D002242 ORTHO05D002275 2.0e-06 57.0 78 48.7
Solyc03g083050.3 Solanum lycopersicum HOM05D002242 ORTHO05D002275 2.0e-06 57.0 98 40.8
VMungo1309G2827 Vigna mungo HOM05D002242 ORTHO05D002275 2.0e-06 57.0 72 51.4
CAN.G481.20 Capsicum annuum HOM05D002242 ORTHO05D002275 2.6e-06 56.6 73 43.8
Lalb_Chr11g0066941 Lupinus albus HOM05D002242 ORTHO05D002275 2.6e-06 56.6 88 43.2
Psat6g034840 Pisum sativum HOM05D002242 ORTHO05D002275 2.6e-06 56.6 76 50.0
Sopen03g022850 Solanum pennellii HOM05D002242 ORTHO05D002275 2.6e-06 56.6 98 40.8
AT4G00950 Arabidopsis thaliana HOM05D002242 ORTHO05D002275 3.4e-06 56.2 220 30.9
MSTRG.8647 Avicennia marina HOM05D002242 ORTHO05D002275 3.4e-06 56.2 137 37.2
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 3.4e-06 56.2 214 31.8
CARHR249390 Cardamine hirsuta HOM05D002242 ORTHO05D002275 3.4e-06 56.2 216 32.4
MELO3C005889.2 Cucumis melo HOM05D002242 ORTHO05D002275 3.4e-06 56.2 132 36.4
Prupe.2G309000 Prunus persica HOM05D002242 ORTHO05D002275 3.4e-06 56.2 168 36.3
FAN06G4446 Fragaria x ananassa HOM05D002242 ORTHO05D002275 4.4e-06 55.8 156 34.0
Solyc05g050550.4 Solanum lycopersicum HOM05D002242 ORTHO05D002275 4.4e-06 55.8 101 42.6
THA.LOC104817057 Tarenaya hassleriana HOM05D002242 ORTHO05D002275 5.8e-06 55.5 237 32.9
CiPaw.05G197700 Carya illinoinensis HOM05D002242 ORTHO05D002275 7.5e-06 55.1 143 34.3
COL.COLO4_16773 Corchorus olitorius HOM05D002242 ORTHO05D002275 7.5e-06 55.1 99 43.4
Thhalv10027290m.g Eutrema salsugineum HOM05D002242 ORTHO05D002275 7.5e-06 55.1 140 37.9
Atru.chr12.2237 Acer truncatum HOM05D002242 ORTHO05D002275 9.9e-06 54.7 185 34.6
BcaB05g22000 Brassica carinata HOM05D002242 ORTHO05D002275 9.9e-06 54.7 180 35.0
A03p57530 Brassica napus HOM05D002242 ORTHO05D002275 9.9e-06 54.7 134 39.6
BraA03t14821Z Brassica rapa HOM05D002242 ORTHO05D002275 9.9e-06 54.7 134 39.6
MD01G1217700 Malus domestica HOM05D002242 ORTHO05D002275 9.9e-06 54.7 129 43.4


User provided reference genes

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