Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 1.4e-113 412.9 199 100.0
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 1.9e-94 349.4 200 83.0
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 4.3e-83 311.6 204 75.5
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 1.8e-81 306.2 200 71.5
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 6.5e-79 297.7 201 70.6
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 6.5e-79 297.7 201 70.6
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.9e-78 296.2 201 69.2
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 2.5e-78 295.8 201 69.7
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 9.3e-78 293.9 194 70.6
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 1.6e-77 293.1 194 69.1
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 4.6e-77 291.6 198 69.7
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 1.0e-76 290.4 196 69.9
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 1.0e-76 290.4 194 68.0
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 2.3e-76 289.3 200 67.0
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 3.0e-76 288.9 193 68.4
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 6.7e-76 287.7 196 69.4
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 6.7e-76 287.7 196 69.4
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 6.7e-76 287.7 191 71.2
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 6.7e-76 287.7 191 71.2
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 8.7e-76 287.3 196 67.9
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 8.7e-76 287.3 199 65.8
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 8.7e-76 287.3 192 69.3
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 1.1e-75 287.0 192 68.2
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 1.1e-75 287.0 198 66.2
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 1.9e-75 286.2 195 68.7
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 2.5e-75 285.8 200 66.5
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 3.3e-75 285.4 196 67.9
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 3.3e-75 285.4 201 66.2
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 5.7e-75 284.6 192 69.8
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 5.7e-75 284.6 200 67.0
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 7.4e-75 284.3 193 66.3
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 7.4e-75 284.3 219 64.4
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 1.3e-74 283.5 200 68.5
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 2.8e-74 282.3 199 71.9
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 3.7e-74 282.0 197 66.5
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 3.7e-74 282.0 198 68.2
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 9.0e-73 277.3 196 65.3
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 2.0e-72 276.2 199 63.8
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 2.6e-72 275.8 198 68.2
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 2.6e-72 275.8 201 62.7
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 3.4e-72 275.4 197 62.9
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 4.5e-72 275.0 198 65.7
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 5.9e-72 274.6 192 64.6
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 7.6e-72 274.2 197 66.5
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 1.7e-71 273.1 199 63.8
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 2.2e-71 272.7 194 66.0
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 2.2e-71 272.7 195 64.6
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 2.2e-71 272.7 192 65.6
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 2.2e-71 272.7 192 65.6
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 2.9e-71 272.3 197 62.4
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 6.5e-71 271.2 200 62.0
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 8.5e-71 270.8 197 62.4
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 8.5e-71 270.8 197 62.4
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 1.1e-70 270.4 196 65.8
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 1.9e-70 269.6 201 64.2
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 2.5e-70 269.2 192 65.1
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 3.2e-70 268.9 197 61.9
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 3.2e-70 268.9 197 61.4
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 4.2e-70 268.5 187 68.4
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 5.5e-70 268.1 197 61.9
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 5.5e-70 268.1 197 62.4
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 5.5e-70 268.1 184 68.5
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 5.5e-70 268.1 194 61.9
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 7.2e-70 267.7 202 63.4
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 9.3e-70 267.3 194 64.9
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 1.6e-69 266.5 194 61.9
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 1.6e-69 266.5 183 68.3
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 4.6e-69 265.0 192 63.5
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 1.0e-68 263.8 197 64.5
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 5.7e-67 258.1 196 60.2
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 5.7e-67 258.1 194 61.9
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 9.7e-67 257.3 169 70.4
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 9.7e-67 257.3 193 60.1
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 4.1e-65 251.9 198 57.6
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 1.0e-63 247.3 200 60.5
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 2.9e-63 245.7 169 67.5
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 2.9e-63 245.7 197 55.8
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 3.8e-63 245.4 156 71.8
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 5.0e-63 245.0 198 58.1
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 1.9e-62 243.0 164 68.9
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 4.2e-62 241.9 161 68.3
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 4.6e-61 238.4 197 56.9
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 1.4e-60 236.9 163 68.7
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 8.8e-60 234.2 171 60.8
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 8.8e-60 234.2 197 54.3
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 1.5e-59 233.4 195 53.8
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 2.6e-59 232.6 196 52.6
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 2.2e-58 229.6 200 55.5
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 8.2e-58 227.6 219 51.6
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 1.4e-57 226.9 166 60.8
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 1.2e-56 223.8 194 57.2
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 5.0e-55 218.4 161 65.8
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.2e-54 215.7 166 63.3
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 1.0e-52 210.7 132 71.2
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 2.3e-52 209.5 198 52.5
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 3.9e-52 208.8 194 54.6
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 6.7e-52 208.0 133 72.9
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 6.7e-52 208.0 133 72.9
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 2.2e-50 203.0 199 50.3
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 5.3e-49 198.4 192 49.0
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 6.5e-47 191.4 196 42.3
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 2.7e-45 186.0 200 48.5
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 2.2e-42 176.4 175 53.1
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 1.0e-39 167.5 192 46.4
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 5.0e-39 165.2 107 66.4
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 8.3e-34 147.9 222 36.9
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 7.7e-32 141.4 81 77.8
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.9e-31 139.4 92 71.7
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 8.5e-31 137.9 269 34.2
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 7.5e-27 124.8 111 55.9
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 1.6e-24 117.1 92 62.0
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 4.3e-22 109.0 78 65.4
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 3.6e-21 105.9 185 32.4
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 1.7e-15 87.0 136 34.6
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 8.6e-15 84.7 71 59.2
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 2.5e-14 83.2 231 29.0
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.4e-12 77.4 62 59.7
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 7.8e-08 61.6 41 63.4
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 1.7e-07 60.5 53 60.4
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 2.3e-07 60.1 58 50.0
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 3.0e-07 59.7 57 50.9


User provided reference genes

Program Settings