Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold232G43495 Striga asiatica HOM05D002974 ORTHO05D002992 2.4e-79 298.9 164 100.0
SGA_v2.0_scaffold43G16289 Striga asiatica HOM05D002974 ORTHO05D002992 3.5e-30 135.6 158 54.4
MSTRG.28034 Avicennia marina HOM05D002974 ORTHO05D002992 4.0e-26 122.1 147 53.1
Migut.N01854 Erythranthe guttata HOM05D002974 ORTHO05D002992 4.0e-26 122.1 132 56.8
MSTRG.5073 Avicennia marina HOM05D002974 ORTHO05D002992 1.2e-22 110.5 134 53.7
SalBow6G5116 Salvia bowleyana HOM05D002974 ORTHO05D002992 2.7e-22 109.4 123 55.3
Oeu053079.1 Olea europaea HOM05D002974 ORTHO05D002992 3.3e-20 102.4 132 50.8
Oeu006786.1 Olea europaea HOM05D002974 ORTHO05D002992 9.5e-20 100.9 132 51.5
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 8.4e-16 87.8 134 43.3
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 2.7e-14 82.8 160 38.1
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 2.7e-14 82.8 160 38.1
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 6.0e-14 81.6 169 36.7
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 1.3e-13 80.5 133 46.6
SalBow5G5227 Salvia bowleyana HOM05D002974 ORTHO05D002992 1.3e-13 80.5 132 47.0
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 3.9e-13 79.0 129 45.0
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 1.9e-12 76.6 159 38.4
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 1.9e-12 76.6 166 37.3
Migut.B01240 Erythranthe guttata HOM05D002974 ORTHO05D002992 1.2e-11 73.9 130 42.3
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 3.6e-11 72.4 127 40.9
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 4.0e-10 68.9 101 46.5
Nitab4.5_0003481g0110 Nicotiana tabacum HOM05D002974 ORTHO05D002992 6.9e-10 68.2 137 40.1
Nitab4.5_0005808g0010 Nicotiana tabacum HOM05D002974 ORTHO05D002992 3.4e-09 65.9 164 33.5
unitig_26.g9507 Utricularia gibba HOM05D002974 ORTHO05D002992 4.4e-09 65.5 132 38.6
QL07p010402 Quercus lobata HOM05D002974 ORTHO05D002992 7.6e-09 64.7 138 35.5
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.3e-08 63.9 146 34.2
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 2.2e-08 63.2 125 36.8
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 2.9e-08 62.8 48 68.8
ECA234G2872 Erigeron canadensis HOM05D002974 ORTHO05D002992 6.4e-08 61.6 125 39.2
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 6.4e-08 61.6 142 35.9
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 6.4e-08 61.6 146 33.6
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 8.4e-08 61.2 133 38.3
AUR62032633 Chenopodium quinoa HOM05D012416 ORTHO05D002992 8.4e-08 61.2 137 35.8
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 1.1e-07 60.8 144 34.0
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 1.1e-07 60.8 121 41.3
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.1e-07 60.8 125 39.2
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.4e-07 60.5 58 55.2
Manes.04G157400 Manihot esculenta HOM05D002974 ORTHO05D002992 1.4e-07 60.5 123 37.4
PSO339G5722 Papaver somniferum HOM05D002974 ORTHO05D002992 1.4e-07 60.5 48 66.7
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 1.4e-07 60.5 60 55.0
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 1.9e-07 60.1 141 36.2
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 1.9e-07 60.1 162 29.6
CANSAT56G2792 Cannabis sativa HOM05D002974 ORTHO05D002992 2.4e-07 59.7 36 83.3
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 2.4e-07 59.7 147 31.3
Migut.B00886 Erythranthe guttata HOM05D002974 ORTHO05D002992 3.2e-07 59.3 132 41.7
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 3.2e-07 59.3 58 53.4
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.2e-07 59.3 58 53.4
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.2e-07 59.3 58 53.4
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 3.2e-07 59.3 60 55.0
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 3.2e-07 59.3 60 55.0
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 3.2e-07 59.3 58 53.4
Duzib106G1811 Durio zibethinus HOM05D002974 ORTHO05D002992 4.2e-07 58.9 138 33.3
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 4.2e-07 58.9 36 77.8
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 4.2e-07 58.9 129 41.1
Eucgr.G03218 Eucalyptus grandis HOM05D002974 ORTHO05D002992 5.4e-07 58.5 144 34.7
Sed0006618 Sechium edule HOM05D002974 ORTHO05D002992 5.4e-07 58.5 99 43.4
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 7.1e-07 58.2 58 53.4
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 7.1e-07 58.2 34 85.3
MELO3C012484.2 Cucumis melo HOM05D002974 ORTHO05D002992 9.3e-07 57.8 108 38.0
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 1.2e-06 57.4 66 50.0
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 1.2e-06 57.4 48 60.4
ClCG05G026910 Citrullus lanatus HOM05D002974 ORTHO05D002992 1.2e-06 57.4 35 80.0
Sc10g0004500 Simmondsia chinensis HOM05D002974 ORTHO05D002992 1.2e-06 57.4 127 37.8
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 1.2e-06 57.4 34 82.4
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 1.6e-06 57.0 58 56.9
Sed0000723 Sechium edule HOM05D002974 ORTHO05D002992 1.6e-06 57.0 35 80.0
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 2.1e-06 56.6 36 75.0
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 2.1e-06 56.6 36 75.0
DCAR_025326 Daucus carota HOM05D002974 ORTHO05D002992 2.1e-06 56.6 37 73.0
Os01g0808900 Oryza sativa ssp. japonica HOM05D002974 ORTHO05D002992 2.1e-06 56.6 37 70.3
Lsat_1_v5_gn_4_30161 Lactuca sativa HOM05D002974 ORTHO05D002992 2.7e-06 56.2 91 41.8
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 2.7e-06 56.2 110 40.9
Sed0004403 Sechium edule HOM05D002974 ORTHO05D002992 2.7e-06 56.2 79 44.3
CsaV3_5G036860 Cucumis sativus L. HOM05D002974 ORTHO05D002992 3.5e-06 55.8 114 36.8
Lalb_Chr24g0400351 Lupinus albus HOM05D002974 ORTHO05D002992 3.5e-06 55.8 161 34.2
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 3.5e-06 55.8 150 31.3
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 4.6e-06 55.5 157 30.6
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 4.6e-06 55.5 130 34.6
Os05g0390800 Oryza sativa ssp. japonica HOM05D002974 ORTHO05D002992 4.6e-06 55.5 47 59.6
CDE08G1203 Ceratophyllum demersum HOM05D002974 ORTHO05D002992 6.0e-06 55.1 62 48.4
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 7.8e-06 54.7 116 38.8
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 7.8e-06 54.7 152 32.2


User provided reference genes

Program Settings