Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold231G43417 Striga asiatica HOM05D008413 ORTHO05D000401 8.6e-96 353.6 172 100.0
SGA_v2.0_scaffold176G39371 Striga asiatica HOM05D008413 ORTHO05D000401 4.4e-76 288.1 192 77.6
SGA_v2.0_scaffold38G15030 Striga asiatica HOM05D008413 ORTHO05D000401 2.5e-55 219.2 190 65.8
SGA_v2.0_scaffold284G47013 Striga asiatica HOM05D008413 ORTHO05D000401 1.0e-48 197.2 130 78.5
SGA_v2.0_scaffold74G24715 Striga asiatica HOM05D008413 ORTHO05D000401 7.1e-42 174.5 113 81.4
SGA_v2.0_scaffold74G24716 Striga asiatica HOM05D008413 ORTHO05D000401 1.7e-19 100.1 48 95.8
SGA_v2.0_scaffold86G26910 Striga asiatica HOM05D008413 ORTHO05D000401 8.5e-19 97.8 165 36.4
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 2.5e-18 96.3 152 40.1
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 4.2e-18 95.5 128 39.1
SGA_v2.0_scaffold28G12014 Striga asiatica HOM05D008413 ORTHO05D000401 4.2e-18 95.5 176 35.2
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 9.4e-18 94.4 113 46.0
SGA_v2.0_scaffold119G32741 Striga asiatica HOM05D008413 ORTHO05D000401 9.4e-18 94.4 96 47.9
SGA_v2.0_scaffold368G50078 Striga asiatica HOM05D008413 ORTHO05D000401 1.2e-17 94.0 96 46.9
Atru.chr11.187 Acer truncatum HOM05D008413 ORTHO05D000401 2.1e-17 93.2 110 50.0
SGA_v2.0_scaffold90G27840 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-16 90.5 96 45.8
SGA_v2.0_scaffold85G26643 Striga asiatica HOM05D008413 ORTHO05D000401 1.2e-12 77.4 86 47.7
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 2.6e-12 76.3 126 38.9
SGA_v2.0_scaffold22G09929 Striga asiatica HOM05D008413 ORTHO05D000401 3.4e-12 75.9 116 37.9
PSO339G5332 Papaver somniferum HOM05D008413 ORTHO05D000401 7.7e-12 74.7 123 35.0
SGA_v2.0_scaffold221G42721 Striga asiatica HOM05D008413 ORTHO05D000401 1.0e-11 74.3 78 50.0
SGA_v2.0_scaffold50G18468 Striga asiatica HOM05D008413 ORTHO05D000401 1.3e-11 73.9 83 47.0
PSO541G5389 Papaver somniferum HOM05D008413 ORTHO05D000401 2.2e-11 73.2 127 39.4
SGA_v2.0_scaffold169G38717 Striga asiatica HOM05D008413 ORTHO05D000401 6.5e-11 71.6 152 32.9
SGA_v2.0_scaffold6G03316 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-10 70.5 98 50.0
PSO170G1591 Papaver somniferum HOM05D008413 ORTHO05D000401 3.2e-10 69.3 127 38.6
PSO478G0274 Papaver somniferum HOM05D008413 ORTHO05D000401 7.2e-10 68.2 127 37.8
PSO541G0947 Papaver somniferum HOM05D008413 ORTHO05D000401 7.2e-10 68.2 127 37.8
SGA_v2.0_scaffold12G05983 Striga asiatica HOM05D008413 ORTHO05D000401 7.2e-10 68.2 154 31.8
BolC1t03974H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-09 67.4 99 39.4
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 2.1e-09 66.6 87 41.4
Ciclev10033751m.g Citrus clementina HOM05D001576 ORTHO05D000401 4.7e-09 65.5 91 38.5
PSO017G1655 Papaver somniferum HOM05D008413 ORTHO05D000401 4.7e-09 65.5 123 33.3
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 4.7e-09 65.5 90 41.1
SGA_v2.0_scaffold234G43617 Striga asiatica HOM05D008413 ORTHO05D000401 4.7e-09 65.5 53 49.1
SGA_v2.0_scaffold177G39426 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-08 63.9 69 44.9
BolC9t58095H Brassica oleracea HOM05D000589 ORTHO05D000401 1.8e-08 63.5 98 36.7
Rhsim01G0133600 Rhododendron simsii HOM05D001576 ORTHO05D010219 1.8e-08 63.5 90 40.0
PSO063G1996 Papaver somniferum HOM05D008413 ORTHO05D000401 3.0e-08 62.8 84 41.7
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 3.0e-08 62.8 84 41.7
PSO591G0033 Papaver somniferum HOM05D008413 ORTHO05D000401 3.0e-08 62.8 82 39.0
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 3.0e-08 62.8 84 41.7
PSO832G0249 Papaver somniferum HOM05D008413 ORTHO05D000401 3.0e-08 62.8 84 41.7
Rhsim01G0041500 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.0e-08 62.8 95 42.1
SGA_v2.0_scaffold61G21156 Striga asiatica HOM05D008413 ORTHO05D000401 3.0e-08 62.8 53 50.9
Rhsim07G0047500 Rhododendron simsii HOM05D009487 ORTHO05D011434 8.8e-08 61.2 82 43.9
CSS0035632 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-07 60.8 111 31.5
SGA_v2.0_scaffold323G48638 Striga asiatica HOM05D008413 ORTHO05D000401 1.1e-07 60.8 53 49.1
Rhsim09G0056800 Rhododendron simsii HOM05D001576 ORTHO05D010219 1.5e-07 60.5 94 37.2
CSS0031528 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.1 111 30.6
CSS0047725 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.6e-07 59.7 111 30.6
BolC7t44420H Brassica oleracea HOM05D000589 ORTHO05D000401 3.3e-07 59.3 150 30.0
BolC9t55279H Brassica oleracea HOM05D000589 ORTHO05D000401 4.4e-07 58.9 98 35.7
Rhsim03G0149900 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.4e-07 58.9 103 38.8
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 7.4e-07 58.2 87 36.8
SGA_v2.0_scaffold19G08588 Striga asiatica HOM05D001576 ORTHO05D000401 7.4e-07 58.2 87 36.8
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 7.4e-07 58.2 87 36.8
QL03p071586 Quercus lobata HOM05D001576 ORTHO05D000401 1.3e-06 57.4 93 36.6
AT3G47680 Arabidopsis thaliana HOM05D000589 ORTHO05D000401 1.7e-06 57.0 94 37.2
FvH4_3g31921 Fragaria vesca HOM05D001576 ORTHO05D000401 1.7e-06 57.0 87 33.3
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 1.7e-06 57.0 93 35.5
BolC3t17893H Brassica oleracea HOM05D000589 ORTHO05D000401 2.2e-06 56.6 92 33.7
CSS0004943 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.8e-06 56.2 111 29.7
CSS0006547 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.8e-06 56.2 111 29.7
BcaC05g24983 Brassica carinata HOM05D000589 ORTHO05D000401 3.7e-06 55.8 98 37.8
BolC4t23741H Brassica oleracea HOM05D000589 ORTHO05D000401 3.7e-06 55.8 94 36.2
BolC4t27712H Brassica oleracea HOM05D000589 ORTHO05D000401 3.7e-06 55.8 90 33.3
Aqoxy1G02949 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 6.3e-06 55.1 115 29.6
Aqoxy3G02110 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 6.3e-06 55.1 115 29.6
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.3e-06 55.1 111 30.6
Ciclev10017471m.g Citrus clementina HOM05D001576 ORTHO05D000401 8.2e-06 54.7 96 33.3
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 8.2e-06 54.7 123 30.1
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 8.2e-06 54.7 87 37.9


User provided reference genes

Program Settings