Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold230G43384 Striga asiatica HOM05D030770 ORTHO05D400338 6.8e-61 237.3 130 100.0
SGA_v2.0_scaffold21G09430 Striga asiatica HOM05D030770 ORTHO05D399267 1.4e-18 96.7 66 84.8
SGA_v2.0_scaffold101G29763 Striga asiatica HOM05D030770 ORTHO05D403953 1.9e-18 96.3 64 82.8
SGA_v2.0_scaffold24G10597 Striga asiatica HOM05D000672 ORTHO05D000522 7.8e-17 90.9 64 81.2
SGA_v2.0_scaffold348G49584 Striga asiatica HOM05D030770 ORTHO05D401139 1.9e-15 86.3 64 78.1
SGA_v2.0_scaffold118G32550 Striga asiatica HOM05D000672 ORTHO05D000522 3.8e-11 72.0 66 63.6
SalBow7G3791 Salvia bowleyana HOM05D000672 ORTHO05D000522 1.4e-10 70.1 53 66.0
ECA247G2298 Erigeron canadensis HOM05D000672 ORTHO05D000522 3.2e-10 68.9 62 66.1
MSTRG.1564 Avicennia marina HOM05D000672 ORTHO05D000522 5.4e-10 68.2 58 63.8
Oeu017749.1 Olea europaea HOM05D000672 ORTHO05D000522 5.4e-10 68.2 66 59.1
Oeu044955.1 Olea europaea HOM05D000672 ORTHO05D000522 1.2e-09 67.0 80 57.5
Oeu013895.1 Olea europaea HOM05D000672 ORTHO05D000522 2.1e-09 66.2 78 52.6
Migut.N03370 Erythranthe guttata HOM05D000672 ORTHO05D000522 3.5e-09 65.5 66 62.1
Cc10_g09690 Coffea canephora HOM05D000672 ORTHO05D000522 4.6e-09 65.1 68 55.9
MSTRG.25472 Avicennia marina HOM05D000672 ORTHO05D000522 6.0e-09 64.7 43 74.4
Migut.C01317 Erythranthe guttata HOM05D000672 ORTHO05D000522 1.3e-08 63.5 62 59.7
Lsat_1_v5_gn_1_26001 Lactuca sativa HOM05D000672 ORTHO05D000522 3.0e-08 62.4 66 56.1
SGA_v2.0_scaffold19G08939 Striga asiatica HOM05D000672 ORTHO05D000522 3.0e-08 62.4 58 56.9
CSS0042135 Camellia sinensis var. sinensis HOM05D000672 ORTHO05D000522 1.1e-07 60.5 51 64.7
Dinv41756 Davidia involucrata HOM05D000672 ORTHO05D000522 1.5e-07 60.1 66 59.1
unitig_0.g2056 Utricularia gibba HOM05D000672 ORTHO05D000522 2.5e-07 59.3 53 56.6
Gohir.D13G123100 Gossypium hirsutum HOM05D000672 ORTHO05D000522 3.3e-07 58.9 84 47.6
Gorai.013G138100 Gossypium raimondii HOM05D000672 ORTHO05D000522 3.3e-07 58.9 84 47.6
Medtr4g033435 Medicago truncatula HOM05D000672 ORTHO05D000522 3.3e-07 58.9 80 52.5
vmacro00979 Vaccinium macrocarpon HOM05D000672 ORTHO05D000522 3.3e-07 58.9 57 61.4
VMungo1127G0350 Vigna mungo HOM05D000672 ORTHO05D000522 3.3e-07 58.9 48 64.6
Actinidia23034 Actinidia chinensis HOM05D000672 ORTHO05D000522 4.3e-07 58.5 62 54.8
Solyc11g051160.2 Solanum lycopersicum HOM05D000672 ORTHO05D000522 4.3e-07 58.5 42 69.0
Nitab4.5_0001463g0010 Nicotiana tabacum HOM05D000672 ORTHO05D000522 5.6e-07 58.2 44 65.9
Nitab4.5_0004698g0050 Nicotiana tabacum HOM05D000672 ORTHO05D000522 5.6e-07 58.2 44 65.9
Psat7g146080 Pisum sativum HOM05D000672 ORTHO05D000522 5.6e-07 58.2 67 56.7
CAN.G308.32 Capsicum annuum HOM05D000672 ORTHO05D000522 7.3e-07 57.8 57 59.6
HanXRQChr02g0036611 Helianthus annuus HOM05D000672 ORTHO05D000522 7.3e-07 57.8 66 53.0
Duzib177G0856 Durio zibethinus HOM05D000672 ORTHO05D000522 9.6e-07 57.4 48 64.6
Peaxi162Scf00688g00431 Petunia axillaris HOM05D000672 ORTHO05D000522 9.6e-07 57.4 44 65.9
SGA_v2.0_scaffold24G10600 Striga asiatica HOM05D000672 ORTHO05D000522 9.6e-07 57.4 37 73.0
Peaxi162Scf01231g00214 Petunia axillaris HOM05D000672 ORTHO05D000522 1.3e-06 57.0 75 50.7
Sopen11g022500 Solanum pennellii HOM05D000672 ORTHO05D000522 1.3e-06 57.0 42 66.7
PGSC0003DMG400005189 Solanum tuberosum HOM05D000672 ORTHO05D000522 1.3e-06 57.0 69 56.5
unitig_747.g21559 Utricularia gibba HOM05D000672 ORTHO05D000522 1.3e-06 57.0 50 58.0
Gohir.D05G274900 Gossypium hirsutum HOM05D000672 ORTHO05D000522 1.6e-06 56.6 49 63.3
Gorai.009G288200 Gossypium raimondii HOM05D000672 ORTHO05D000522 1.6e-06 56.6 49 63.3
Nitab4.5_0004970g0020 Nicotiana tabacum HOM05D000672 ORTHO05D000522 1.6e-06 56.6 65 53.8
Sc23g0001490 Simmondsia chinensis HOM05D000672 ORTHO05D000522 1.6e-06 56.6 66 50.0
COL.COLO4_24657 Corchorus olitorius HOM05D000672 ORTHO05D000522 2.1e-06 56.2 48 62.5
Nitab4.5_0005558g0010 Nicotiana tabacum HOM05D000672 ORTHO05D000522 2.1e-06 56.2 71 53.5
Potri.013G106000 Populus trichocarpa HOM05D000672 ORTHO05D000522 2.1e-06 56.2 63 52.4
HanXRQChr04g0101781 Helianthus annuus HOM05D000672 ORTHO05D000522 2.8e-06 55.8 63 52.4
Sabra13G0091700 Salix brachista HOM05D000672 ORTHO05D000522 2.8e-06 55.8 65 50.8
Rhsim12G0006200 Rhododendron simsii HOM05D000672 ORTHO05D000522 3.6e-06 55.5 64 54.7
Gohir.A13G119300 Gossypium hirsutum HOM05D000672 ORTHO05D000522 4.8e-06 55.1 84 45.2
MD15G1406000 Malus domestica HOM05D000672 ORTHO05D000522 4.8e-06 55.1 56 57.1
TWI23G0615 Tripterygium wilfordii HOM05D000672 ORTHO05D000522 4.8e-06 55.1 65 52.3
PSO170G4548 Papaver somniferum HOM05D000672 ORTHO05D000522 6.2e-06 54.7 39 66.7
Solyc06g064940.3 Solanum lycopersicum HOM05D000672 ORTHO05D000522 6.2e-06 54.7 66 54.5
Sopen06g023460 Solanum pennellii HOM05D000672 ORTHO05D000522 6.2e-06 54.7 66 54.5
TAR381G1592 Trochodendron aralioides HOM05D000672 ORTHO05D000522 6.2e-06 54.7 66 53.0
Manes.02G198300 Manihot esculenta HOM05D000672 ORTHO05D000522 8.1e-06 54.3 64 51.6


User provided reference genes

Program Settings