Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold230G43383 Striga asiatica HOM05D010638 ORTHO05D000013 4.3e-161 571.2 285 100.0
SGA_v2.0_scaffold51G18898 Striga asiatica HOM05D010638 ORTHO05D401274 6.3e-11 72.4 166 36.1
SGA_v2.0_scaffold199G41208 Striga asiatica HOM05D000017 ORTHO05D000013 2.7e-09 67.0 102 36.3
Migut.N02018 Erythranthe guttata HOM05D000017 ORTHO05D000013 4.5e-09 66.2 143 30.1
ECA248G3890 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.7e-09 65.5 114 34.2
SGA_v2.0_scaffold47G17801 Striga asiatica HOM05D000718 ORTHO05D003905 7.7e-09 65.5 106 48.1
CANSAT54G2672 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-08 65.1 173 26.0
Rhsim02G0014700 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.2e-08 63.9 395 22.3
Sopen10g004610 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-08 63.9 151 33.1
Solyc01g100103.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 2.9e-08 63.5 151 33.1
Sopen06g023150 Solanum pennellii HOM05D000017 ORTHO05D000308 2.9e-08 63.5 151 33.1
CAN.G407.125 Capsicum annuum HOM05D000017 ORTHO05D000013 3.8e-08 63.2 260 22.3
CANSAT25G0975 Cannabis sativa HOM05D000017 ORTHO05D000013 5.0e-08 62.8 108 34.3
Atru.chr11.364 Acer truncatum HOM05D000017 ORTHO05D000013 6.5e-08 62.4 117 30.8
Rhsim01G0063200 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.5e-08 62.0 89 33.7
Atru.chr6.360 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-07 61.6 109 33.9
Atru.chr6.3056 Acer truncatum HOM05D000017 ORTHO05D000013 1.5e-07 61.2 344 23.0
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-07 61.2 169 27.2
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-07 61.2 169 27.2
Rhsim01G0182800 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.5e-07 61.2 236 25.0
Atru.chr7.602 Acer truncatum HOM05D000017 ORTHO05D000013 2.5e-07 60.5 172 29.1
CANSAT11G1337 Cannabis sativa HOM05D000017 ORTHO05D000013 4.2e-07 59.7 122 31.1
Ca_19677_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 4.2e-07 59.7 249 26.1
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-07 59.7 171 28.7
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-07 59.7 171 28.7
Prupe.4G046500 Prunus persica HOM05D000017 ORTHO05D000013 4.2e-07 59.7 183 23.5
Atru.chr9.1874 Acer truncatum HOM05D000017 ORTHO05D000013 7.2e-07 58.9 100 36.0
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-06 58.2 172 27.9
FvH4_3g34182 Fragaria vesca HOM05D000017 ORTHO05D009451 1.6e-06 57.8 185 26.5
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-06 57.8 126 31.0
CANSAT21G0768 Cannabis sativa HOM05D000017 ORTHO05D000013 2.1e-06 57.4 122 29.5
Hma1.2p1_2873F.1_g329720 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.6e-06 56.6 330 25.5
ECA240G2744 Erigeron canadensis HOM05D000017 ORTHO05D000013 6.1e-06 55.8 134 26.9
CANSAT11G0754 Cannabis sativa HOM05D000017 ORTHO05D000013 8.0e-06 55.5 114 29.8


User provided reference genes

Program Settings