Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold230G43372 Striga asiatica HOM05D003108 ORTHO05D000003 3.1e-81 305.1 154 100.0
MSTRG.25116 Avicennia marina HOM05D003108 ORTHO05D000003 7.6e-35 151.0 156 53.8
Oeu009567.1 Olea europaea HOM05D003108 ORTHO05D000003 3.4e-27 125.6 163 49.7
Solyc04g079410.3 Solanum lycopersicum HOM05D003108 ORTHO05D000003 1.7e-26 123.2 163 48.5
Nitab4.5_0000068g0300 Nicotiana tabacum HOM05D003108 ORTHO05D000003 2.9e-26 122.5 158 49.4
Nitab4.5_0011646g0010 Nicotiana tabacum HOM05D003108 ORTHO05D000003 2.9e-26 122.5 158 48.7
Peaxi162Scf01092g00113 Petunia axillaris HOM05D003108 ORTHO05D000003 8.4e-26 120.9 161 47.8
Sopen04g033020 Solanum pennellii HOM05D003108 ORTHO05D000003 1.1e-25 120.6 163 47.9
PGSC0003DMG400007998 Solanum tuberosum HOM05D003108 ORTHO05D000003 9.3e-25 117.5 163 46.6
Actinidia15271 Actinidia chinensis HOM05D003108 ORTHO05D000003 1.3e-23 113.6 117 51.3
Hma1.2p1_0337F.1_g129250 Hydrangea macrophylla HOM05D003108 ORTHO05D000003 1.7e-23 113.2 140 46.4
SalBow7G3304 Salvia bowleyana HOM05D003108 ORTHO05D000003 2.3e-23 112.8 144 48.6
Dinv39344 Davidia involucrata HOM05D003108 ORTHO05D000003 3.0e-23 112.5 161 44.7
TAR625G0703 Trochodendron aralioides HOM05D003108 ORTHO05D000003 6.6e-23 111.3 139 48.2
Cc11_g07070 Coffea canephora HOM05D003108 ORTHO05D000003 4.3e-22 108.6 127 52.0
Lj4A49T80 Lonicera japonica HOM05D003108 ORTHO05D000003 1.1e-20 104.0 122 44.3
CSS0020615 Camellia sinensis var. sinensis HOM05D003108 ORTHO05D000003 9.0e-20 100.9 115 49.6
CSS0040327 Camellia sinensis var. sinensis HOM05D003108 ORTHO05D000003 9.0e-20 100.9 115 49.6
Ciclev10002154m.g Citrus clementina HOM05D003108 ORTHO05D000003 1.5e-19 100.1 122 46.7
unitig_748.g7781 Utricularia gibba HOM05D003108 ORTHO05D000003 2.6e-19 99.4 160 43.1
CiPaw.16G050200 Carya illinoinensis HOM05D003108 ORTHO05D000003 5.8e-19 98.2 142 44.4
Lj5g0023909 Lotus japonicus HOM05D003108 ORTHO05D000003 2.9e-18 95.9 138 42.0
Hund17611 Selenicereus undatus HOM05D003108 ORTHO05D000003 2.9e-18 95.9 139 42.4
Migut.C00617 Erythranthe guttata HOM05D003108 ORTHO05D000003 4.9e-18 95.1 76 64.5
Nn5g29345 Nelumbo nucifera HOM05D003108 ORTHO05D000003 4.9e-18 95.1 137 42.3
Rhsim06G0033100 Rhododendron simsii HOM05D003108 ORTHO05D000003 6.4e-18 94.7 116 45.7
QL02p006209 Quercus lobata HOM05D003108 ORTHO05D000003 8.4e-18 94.4 139 43.9
Haze_22194 Corylus avellana HOM05D003108 ORTHO05D000003 1.1e-17 94.0 124 46.8
MD15G1035700 Malus domestica HOM05D003108 ORTHO05D000003 1.1e-17 94.0 166 41.6
DCAR_020938 Daucus carota HOM05D003108 ORTHO05D000003 1.9e-17 93.2 127 44.1
COL.COLO4_26441 Corchorus olitorius HOM05D003108 ORTHO05D000003 5.4e-17 91.7 118 44.9
vmacro21575 Vaccinium macrocarpon HOM05D003108 ORTHO05D000003 5.4e-17 91.7 131 42.7
TWI56G1072 Tripterygium wilfordii HOM05D003108 ORTHO05D000003 7.1e-17 91.3 114 39.5
CANSAT21G0722 Cannabis sativa HOM05D003108 ORTHO05D000003 1.6e-16 90.1 118 43.2
Lalb_Chr24g0399181 Lupinus albus HOM05D003108 ORTHO05D000003 3.5e-16 89.0 122 41.0
Sc15g0006470 Simmondsia chinensis HOM05D003108 ORTHO05D000003 4.6e-16 88.6 116 45.7
Rhsim06G0042100 Rhododendron simsii HOM05D003108 ORTHO05D000003 6.0e-16 88.2 142 40.1
PGR031G0001 Punica granatum HOM05D003108 ORTHO05D000003 7.9e-16 87.8 159 38.4
Cfa013576 Carpinus fangiana HOM05D003108 ORTHO05D000003 1.0e-15 87.4 104 45.2
Duzib116G0569 Durio zibethinus HOM05D003108 ORTHO05D000003 2.3e-15 86.3 119 42.0
VMungo0647G2206 Vigna mungo HOM05D003108 ORTHO05D000003 2.3e-15 86.3 113 43.4
GSVIVG01009574001 Vitis vinifera HOM05D003108 ORTHO05D000003 2.3e-15 86.3 130 40.8
Ca_13312_v3 Cicer arietinum L. HOM05D003108 ORTHO05D000003 5.1e-15 85.1 113 42.5
Ca_30258_v3 Cicer arietinum L. HOM05D003108 ORTHO05D000003 5.1e-15 85.1 113 42.5
arahy.Tifrunner.gnm1.ann1.2W7RYZ Arachis hypogaea HOM05D003108 ORTHO05D000003 6.6e-15 84.7 129 38.8
arahy.Tifrunner.gnm1.ann1.YVXW4C Arachis hypogaea HOM05D003108 ORTHO05D000003 6.6e-15 84.7 129 38.8
RcHm_v2.0_Chr6g0299861 Rosa chinensis HOM05D003108 ORTHO05D000003 8.7e-15 84.3 133 42.1
Atru.chr13.610 Acer truncatum HOM05D003108 ORTHO05D000003 1.1e-14 84.0 137 39.4
Glyma.14G079700 Glycine max HOM05D003108 ORTHO05D000003 1.9e-14 83.2 105 43.8
Thecc.08G015000 Theobroma cacao HOM05D003108 ORTHO05D000003 3.3e-14 82.4 118 40.7
ATR0767G196 Amborella trichopoda HOM05D003108 ORTHO05D000003 4.3e-14 82.0 142 38.7
TWI12G0608 Tripterygium wilfordii HOM05D003108 ORTHO05D000003 4.3e-14 82.0 134 33.6
EL10Ac1g01814 Beta vulgaris HOM05D003108 ORTHO05D000003 5.6e-14 81.6 149 36.2
FvH4_2g40730 Fragaria vesca HOM05D003108 ORTHO05D000003 5.6e-14 81.6 114 43.9
FAN15G1917 Fragaria x ananassa HOM05D003108 ORTHO05D000003 9.6e-14 80.9 129 41.1
Medtr1g021080 Medicago truncatula HOM05D003108 ORTHO05D000003 1.3e-13 80.5 95 49.5
Glyma.14G079900 Glycine max HOM05D003108 ORTHO05D000003 2.1e-13 79.7 105 42.9
Lsat_1_v5_gn_1_19080 Lactuca sativa HOM05D003108 ORTHO05D000003 2.1e-13 79.7 132 39.4
Phvul.001G019000 Phaseolus vulgaris HOM05D003108 ORTHO05D000003 2.1e-13 79.7 105 43.8
TPR.G13680 Trifolium pratense HOM05D003108 ORTHO05D000003 6.2e-13 78.2 104 44.2
Prupe.1G389600 Prunus persica HOM05D003108 ORTHO05D000003 1.8e-12 76.6 213 31.9
Gohir.A05G199800 Gossypium hirsutum HOM05D003108 ORTHO05D000003 3.1e-12 75.9 118 37.3
HanXRQChr02g0037121 Helianthus annuus HOM05D003108 ORTHO05D000003 6.9e-12 74.7 114 36.8
PSO675G0858 Papaver somniferum HOM05D003108 ORTHO05D000003 1.2e-11 73.9 153 33.3
SHI05957 Sapria himalayana HOM05D003108 ORTHO05D000003 1.2e-11 73.9 104 38.5
Gorai.009G208700 Gossypium raimondii HOM05D003108 ORTHO05D000003 1.5e-11 73.6 112 36.6
Psat6g011160 Pisum sativum HOM05D003108 ORTHO05D000003 1.5e-11 73.6 99 41.4
Aqoxy6G00887 Aquilegia oxysepala HOM05D003108 ORTHO05D000003 2.0e-11 73.2 114 43.0
Gohir.D05G202800 Gossypium hirsutum HOM05D003108 ORTHO05D000003 2.6e-11 72.8 112 36.6
Ah.05g168890 Amaranthus hybridus HOM05D003108 ORTHO05D000003 3.4e-11 72.4 101 41.6
Sabra14G0025400 Salix brachista HOM05D003108 ORTHO05D000003 5.8e-11 71.6 129 34.9
CARHR037330 Cardamine hirsuta HOM05D003108 ORTHO05D000003 9.9e-11 70.9 109 41.3
Potri.014G035600 Populus trichocarpa HOM05D004352 ORTHO05D000003 1.3e-10 70.5 113 34.5
THA.LOC104806883 Tarenaya hassleriana HOM05D003108 ORTHO05D000003 1.7e-10 70.1 109 35.8
Sp1g34710 Schrenkiella parvula HOM05D004352 ORTHO05D000003 2.2e-10 69.7 135 36.3
Aa31sc380G100 Aethionema arabicum HOM05D003108 ORTHO05D000003 1.1e-09 67.4 110 37.3
ClCG08G015560 Citrullus lanatus HOM05D003108 ORTHO05D000003 1.4e-09 67.0 89 41.6
AT1G47720 Arabidopsis thaliana HOM05D003108 ORTHO05D000003 1.9e-09 66.6 107 38.3
A08p05480 Brassica napus HOM05D004352 ORTHO05D000003 1.9e-09 66.6 121 38.0
Thhalv10011640m.g Eutrema salsugineum HOM05D004352 ORTHO05D000003 2.4e-09 66.2 145 36.6
BcaB08g35794 Brassica carinata HOM05D003108 ORTHO05D000003 3.2e-09 65.9 121 34.7
BraA08t32554Z Brassica rapa HOM05D004352 ORTHO05D000003 7.1e-09 64.7 113 37.2
Zm00001eb051490 Zea mays HOM05D003108 ORTHO05D000003 1.6e-08 63.5 122 36.1
Potri.002G129166 Populus trichocarpa HOM05D003108 ORTHO05D000003 2.1e-08 63.2 132 34.1
BcaC07g37200 Brassica carinata HOM05D004352 ORTHO05D000003 3.0e-07 59.3 113 34.5
BolC8t47405H Brassica oleracea HOM05D004352 ORTHO05D000003 3.9e-07 58.9 113 34.5
Sed0005298 Sechium edule HOM05D003108 ORTHO05D000003 3.9e-07 58.9 89 39.3
PSO541G2245 Papaver somniferum HOM05D003108 ORTHO05D000003 5.1e-07 58.5 96 32.3
BcaB04g17495 Brassica carinata HOM05D004352 ORTHO05D000003 6.7e-07 58.2 126 34.1
AL1G54090 Arabidopsis lyrata HOM05D003108 ORTHO05D000003 1.1e-06 57.4 118 34.7
C08p06020 Brassica napus HOM05D004352 ORTHO05D000003 1.1e-06 57.4 113 34.5
CsaV3_2G028210 Cucumis sativus L. HOM05D003108 ORTHO05D000003 1.5e-06 57.0 160 30.6
SGA_v2.0_scaffold81G26059 Striga asiatica HOM05D003108 ORTHO05D000003 2.5e-06 56.2 111 29.7
DCAR_002687 Daucus carota HOM05D003108 ORTHO05D000003 3.3e-06 55.8 105 33.3
arahy.Tifrunner.gnm1.ann1.20NWG8 Arachis hypogaea HOM05D003108 ORTHO05D000003 5.6e-06 55.1 99 35.4
HPP92_018722 Vanilla planifolia HOM05D003108 ORTHO05D000003 7.4e-06 54.7 135 30.4
MSTRG.28027 Avicennia marina HOM05D003108 ORTHO05D000003 9.6e-06 54.3 99 34.3


User provided reference genes

Program Settings