Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09962 Striga asiatica HOM05D002242 ORTHO05D002275 1.8e-142 509.2 259 100.0
MSTRG.28269 Avicennia marina HOM05D002242 ORTHO05D002275 1.9e-30 137.1 221 41.6
MSTRG.17354 Avicennia marina HOM05D002242 ORTHO05D002275 2.5e-30 136.7 214 46.7
SalBow3G1264 Salvia bowleyana HOM05D002242 ORTHO05D002275 1.5e-27 127.5 173 47.4
SalBow5G1307 Salvia bowleyana HOM05D002242 ORTHO05D002275 9.1e-25 118.2 180 44.4
Migut.O00897 Erythranthe guttata HOM05D002242 ORTHO05D002275 3.2e-22 109.8 225 38.2
Cc02_g39550 Coffea canephora HOM05D002242 ORTHO05D002275 6.1e-21 105.5 203 40.9
DCAR_005401 Daucus carota HOM05D002242 ORTHO05D002275 1.5e-19 100.9 196 43.9
Oeu043226.1 Olea europaea HOM05D002242 ORTHO05D002275 3.7e-18 96.3 184 40.2
SGA_v2.0_scaffold232G43549 Striga asiatica HOM05D002242 ORTHO05D002275 2.4e-17 93.6 218 37.2
Atru.chr5.685 Acer truncatum HOM05D002242 ORTHO05D002275 1.2e-16 91.3 212 35.8
Hma1.2p1_0390F.1_g142630 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 2.0e-16 90.5 152 43.4
Migut.N01536 Erythranthe guttata HOM05D002242 ORTHO05D002275 1.7e-15 87.4 115 46.1
Oeu004983.1 Olea europaea HOM05D002242 ORTHO05D002275 2.9e-15 86.7 200 35.0
GSVIVG01027167001 Vitis vinifera HOM05D002242 ORTHO05D002275 6.6e-15 85.5 232 37.9
Duzib138G1576 Durio zibethinus HOM05D002242 ORTHO05D002275 7.2e-14 82.0 213 35.7
Oeu007879.1 Olea europaea HOM05D002242 ORTHO05D002275 7.2e-14 82.0 190 36.8
Peaxi162Scf00345g00124 Petunia axillaris HOM05D002242 ORTHO05D002275 7.2e-14 82.0 203 34.5
Dinv34219 Davidia involucrata HOM05D002242 ORTHO05D002275 1.2e-13 81.3 227 35.7
Oeu004958.1 Olea europaea HOM05D002242 ORTHO05D002275 1.6e-13 80.9 208 38.0
Prupe.2G190500 Prunus persica HOM05D002242 ORTHO05D002275 2.8e-13 80.1 202 39.1
SalBow2G3365 Salvia bowleyana HOM05D002242 ORTHO05D002275 2.8e-13 80.1 196 36.7
TWI39G0876 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 4.7e-13 79.3 177 36.7
TAR636G3588 Trochodendron aralioides HOM05D002242 ORTHO05D002275 8.0e-13 78.6 197 39.6
QL09p008666 Quercus lobata HOM05D002242 ORTHO05D002275 1.4e-12 77.8 176 38.6
unitig_899.g14793 Utricularia gibba HOM05D002242 ORTHO05D002275 1.4e-12 77.8 203 36.5
MD01G1083500 Malus domestica HOM05D002242 ORTHO05D002275 1.8e-12 77.4 217 38.2
CiPaw.06G045500 Carya illinoinensis HOM05D002242 ORTHO05D002275 2.3e-12 77.0 178 36.5
Peaxi162Scf00087g02228 Petunia axillaris HOM05D002242 ORTHO05D002275 3.0e-12 76.6 184 38.6
CiPaw.01G077500 Carya illinoinensis HOM05D002242 ORTHO05D002275 5.2e-12 75.9 220 35.0
MD07G1152200 Malus domestica HOM05D002242 ORTHO05D002275 5.2e-12 75.9 216 36.6
Actinidia07972 Actinidia chinensis HOM05D002242 ORTHO05D002275 8.9e-12 75.1 230 36.1
Hma1.2p1_0101F.1_g049310 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 8.9e-12 75.1 197 34.5
Migut.B01887 Erythranthe guttata HOM05D002242 ORTHO05D002275 1.2e-11 74.7 227 34.8
TAR425G0001 Trochodendron aralioides HOM05D002242 ORTHO05D002275 2.0e-11 73.9 182 38.5
Potri.015G011900 Populus trichocarpa HOM05D002242 ORTHO05D002275 2.6e-11 73.6 193 31.1
PGR142G4389 Punica granatum HOM05D002242 ORTHO05D002275 3.4e-11 73.2 182 33.5
Rhsim03G0209500 Rhododendron simsii HOM05D002242 ORTHO05D002275 3.4e-11 73.2 162 37.7
CiPaw.05G197700 Carya illinoinensis HOM05D002242 ORTHO05D002275 4.4e-11 72.8 168 35.7
Prupe.2G309000 Prunus persica HOM05D002242 ORTHO05D002275 5.7e-11 72.4 175 37.1
Thecc.01G340500 Theobroma cacao HOM05D002242 ORTHO05D002275 5.7e-11 72.4 218 37.2
Lsat_1_v5_gn_6_85600 Lactuca sativa HOM05D002242 ORTHO05D002275 7.5e-11 72.0 107 42.1
Lsat_1_v5_gn_4_33660 Lactuca sativa HOM05D002242 ORTHO05D002275 9.8e-11 71.6 107 42.1
Manes.02G144300 Manihot esculenta HOM05D002242 ORTHO05D002275 9.8e-11 71.6 175 36.6
QL08p045696 Quercus lobata HOM05D002242 ORTHO05D002275 9.8e-11 71.6 195 36.4
Gohir.D11G102500 Gossypium hirsutum HOM05D002242 ORTHO05D002275 1.3e-10 71.2 212 34.0
MD07G1286900 Malus domestica HOM05D002242 ORTHO05D002275 1.3e-10 71.2 199 36.7
Hund27189 Selenicereus undatus HOM05D002242 ORTHO05D002275 1.7e-10 70.9 137 39.4
Actinidia20250 Actinidia chinensis HOM05D002242 ORTHO05D002275 2.2e-10 70.5 224 33.9
CAN.G1415.21 Capsicum annuum HOM05D002242 ORTHO05D002275 2.2e-10 70.5 175 32.6
Dinv29268 Davidia involucrata HOM05D002242 ORTHO05D002275 2.2e-10 70.5 192 35.9
Hma1.2p1_1587F.1_g292270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 2.2e-10 70.5 189 36.0
Haze_15674 Corylus avellana HOM05D002242 ORTHO05D002275 2.8e-10 70.1 195 32.8
Hma1.2p1_0404F.1_g145270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 2.8e-10 70.1 189 36.0
Nitab4.5_0004497g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 2.8e-10 70.1 149 37.6
Gorai.007G109600 Gossypium raimondii HOM05D002242 ORTHO05D002275 3.7e-10 69.7 194 35.1
Ah.05g179410 Amaranthus hybridus HOM05D002242 ORTHO05D002275 4.9e-10 69.3 97 49.5
FvH4_7g31360 Fragaria vesca HOM05D002242 ORTHO05D002275 4.9e-10 69.3 172 37.2
FAN06G3788 Fragaria x ananassa HOM05D002242 ORTHO05D002275 4.9e-10 69.3 172 37.2
Gohir.A11G097800 Gossypium hirsutum HOM05D002242 ORTHO05D002275 6.3e-10 68.9 212 33.5
CANSAT56G1040 Cannabis sativa HOM05D002242 ORTHO05D002275 8.3e-10 68.6 183 37.7
CSS0021112 Camellia sinensis var. sinensis HOM05D002242 ORTHO05D002275 1.1e-09 68.2 189 37.6
Dinv32603 Davidia involucrata HOM05D002242 ORTHO05D002275 1.1e-09 68.2 206 33.0
Lj3g0010764 Lotus japonicus HOM05D002242 ORTHO05D002275 1.1e-09 68.2 180 35.6
Sabra15G0009600 Salix brachista HOM05D002242 ORTHO05D002275 1.1e-09 68.2 175 36.6
Actinidia08657 Actinidia chinensis HOM05D002242 ORTHO05D002275 1.8e-09 67.4 181 38.1
FAN10G3865 Fragaria x ananassa HOM05D002242 ORTHO05D002275 2.4e-09 67.0 216 33.3
Cpa.g.sc96.41 Carica papaya HOM05D002242 ORTHO05D002275 3.2e-09 66.6 224 33.0
Thecc.03G200400 Theobroma cacao HOM05D002242 ORTHO05D002275 3.2e-09 66.6 90 44.4
unitig_62.g23788 Utricularia gibba HOM05D002242 ORTHO05D002275 3.2e-09 66.6 155 40.0
arahy.Tifrunner.gnm1.ann1.QL2KDB Arachis hypogaea HOM05D002242 ORTHO05D002275 4.1e-09 66.2 199 34.2
FvH4_7g16850 Fragaria vesca HOM05D002242 ORTHO05D002275 4.1e-09 66.2 215 33.5
FAN06G0152 Fragaria x ananassa HOM05D002242 ORTHO05D002275 4.1e-09 66.2 215 33.5
FAN06G1161 Fragaria x ananassa HOM05D002242 ORTHO05D002275 4.1e-09 66.2 215 33.5
FAN10G2930 Fragaria x ananassa HOM05D002242 ORTHO05D002275 4.1e-09 66.2 216 33.3
Nitab4.5_0001763g0050 Nicotiana tabacum HOM05D002242 ORTHO05D002275 4.1e-09 66.2 201 31.8
Haze_00202 Corylus avellana HOM05D002242 ORTHO05D002275 5.4e-09 65.9 195 34.4
DCAR_025263 Daucus carota HOM05D002242 ORTHO05D002275 5.4e-09 65.9 197 32.5
ECA234G4607 Erigeron canadensis HOM05D002242 ORTHO05D002275 5.4e-09 65.9 91 42.9
Nitab4.5_0003046g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 5.4e-09 65.9 175 37.1
vmacro06390 Vaccinium macrocarpon HOM05D002242 ORTHO05D002275 5.4e-09 65.9 182 33.5
FAN03G2616 Fragaria x ananassa HOM05D002242 ORTHO05D002275 7.0e-09 65.5 202 34.2
Medtr8g027435 Medicago truncatula HOM05D002242 ORTHO05D002275 7.0e-09 65.5 77 48.1
MBI06_g38007_MAGBIO Magnolia biondii HOM05D002242 ORTHO05D002275 9.2e-09 65.1 193 36.3
Sabra02G0140300 Salix brachista HOM05D002242 ORTHO05D002275 9.2e-09 65.1 112 39.3
FAN06G4446 Fragaria x ananassa HOM05D002242 ORTHO05D002275 1.2e-08 64.7 170 34.7
PSO782G1347 Papaver somniferum HOM05D002242 ORTHO05D002275 1.2e-08 64.7 91 44.0
TWI14G0218 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 1.2e-08 64.7 106 40.6
vmacro13169 Vaccinium macrocarpon HOM05D002242 ORTHO05D002275 1.2e-08 64.7 174 35.6
FAN01G0248 Fragaria x ananassa HOM05D002242 ORTHO05D002275 1.6e-08 64.3 170 33.5
PSO478G1176 Papaver somniferum HOM05D002242 ORTHO05D002275 1.6e-08 64.3 91 44.0
DCAR_020326 Daucus carota HOM05D002242 ORTHO05D002275 2.7e-08 63.5 188 31.9
Nn1g00284 Nelumbo nucifera HOM05D002242 ORTHO05D002275 2.7e-08 63.5 169 36.1
Nitab4.5_0010712g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 2.7e-08 63.5 199 30.7
Sopen01g039800 Solanum pennellii HOM05D002242 ORTHO05D002275 2.7e-08 63.5 165 33.3
Carub.0008s1322 Capsella rubella HOM05D002242 ORTHO05D002275 3.5e-08 63.2 110 37.3
PGSC0003DMG400000119 Solanum tuberosum HOM05D002242 ORTHO05D002275 3.5e-08 63.2 165 32.1
PGSC0003DMG400018549 Solanum tuberosum HOM05D002242 ORTHO05D002275 3.5e-08 63.2 167 33.5
arahy.Tifrunner.gnm1.ann1.73LR1S Arachis hypogaea HOM05D002242 ORTHO05D002275 4.5e-08 62.8 187 35.3
MSTRG.8647 Avicennia marina HOM05D002242 ORTHO05D002275 4.5e-08 62.8 103 40.8
EL10Ac1g00249 Beta vulgaris HOM05D002242 ORTHO05D002275 4.5e-08 62.8 93 44.1
Manes.05G021600 Manihot esculenta HOM05D002242 ORTHO05D002275 4.5e-08 62.8 140 37.1
Potri.002G172900 Populus trichocarpa HOM05D002242 ORTHO05D002275 5.9e-08 62.4 219 35.2
Ciclev10021848m.g Citrus clementina HOM05D002242 ORTHO05D002275 7.8e-08 62.0 137 35.8
FAN01G2189 Fragaria x ananassa HOM05D002242 ORTHO05D002275 7.8e-08 62.0 215 32.6
FAN03G3456 Fragaria x ananassa HOM05D002242 ORTHO05D002275 7.8e-08 62.0 170 33.5
Peaxi162Scf00716g00032 Petunia axillaris HOM05D000078 ORTHO05D000025 7.8e-08 62.0 225 31.6
Solyc03g083050.3 Solanum lycopersicum HOM05D002242 ORTHO05D002275 7.8e-08 62.0 144 35.4
TPR.G20223 Trifolium pratense HOM05D002242 ORTHO05D002275 7.8e-08 62.0 78 46.2
Gohir.D12G250000 Gossypium hirsutum HOM05D002242 ORTHO05D002275 1.0e-07 61.6 173 34.1
Solyc01g096080.3 Solanum lycopersicum HOM05D002242 ORTHO05D002275 1.0e-07 61.6 165 33.3
Actinidia28112 Actinidia chinensis HOM05D002242 ORTHO05D002275 1.3e-07 61.2 167 32.9
EL10Ac3g05266 Beta vulgaris HOM05D002242 ORTHO05D002275 1.3e-07 61.2 135 34.1
Ciclev10021650m.g Citrus clementina HOM05D002242 ORTHO05D002275 1.3e-07 61.2 222 29.3
Potri.014G100200 Populus trichocarpa HOM05D002242 ORTHO05D002275 1.3e-07 61.2 111 38.7
RcHm_v2.0_Chr1g0380431 Rosa chinensis HOM05D002242 ORTHO05D002275 1.3e-07 61.2 174 34.5
Sopen03g022850 Solanum pennellii HOM05D002242 ORTHO05D002275 1.3e-07 61.2 144 35.4
Gohir.A12G249200 Gossypium hirsutum HOM05D002242 ORTHO05D002275 1.7e-07 60.8 201 31.3
MD01G1217700 Malus domestica HOM05D002242 ORTHO05D002275 1.7e-07 60.8 163 37.4
Cfa016239 Carpinus fangiana HOM05D002242 ORTHO05D002275 2.3e-07 60.5 176 34.1
COL.COLO4_06225 Corchorus olitorius HOM05D002242 ORTHO05D002275 2.3e-07 60.5 94 42.6
Nitab4.5_0007888g0030 Nicotiana tabacum HOM05D002242 ORTHO05D002275 2.3e-07 60.5 78 46.2
RcHm_v2.0_Chr1g0360071 Rosa chinensis HOM05D002242 ORTHO05D002275 2.3e-07 60.5 210 32.4
Sabra14G0073600 Salix brachista HOM05D002242 ORTHO05D002275 2.3e-07 60.5 168 34.5
arahy.Tifrunner.gnm1.ann1.P3SJ11 Arachis hypogaea HOM05D002242 ORTHO05D002275 2.9e-07 60.1 197 33.0
TWI23G0291 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 2.9e-07 60.1 113 38.1
BcaC04g20515 Brassica carinata HOM05D002242 ORTHO05D002275 3.9e-07 59.7 133 32.3
A10p10510 Brassica napus HOM05D002242 ORTHO05D002275 3.9e-07 59.7 133 32.3
C09p42730 Brassica napus HOM05D002242 ORTHO05D002275 3.9e-07 59.7 133 32.3
BolC9t57149H Brassica oleracea HOM05D002242 ORTHO05D002275 3.9e-07 59.7 133 32.3
Glyma.07G054700 Glycine max HOM05D002242 ORTHO05D002275 5.0e-07 59.3 217 33.6
Gorai.008G268100 Gossypium raimondii HOM05D002242 ORTHO05D002275 5.0e-07 59.3 169 32.5
THA.LOC104825150 Tarenaya hassleriana HOM05D002242 ORTHO05D002275 5.0e-07 59.3 174 32.2
Ca_12786_v3 Cicer arietinum L. HOM05D002242 ORTHO05D002275 6.6e-07 58.9 183 35.5
Ca_12789_v3 Cicer arietinum L. HOM05D002242 ORTHO05D002275 6.6e-07 58.9 183 35.5
Nitab4.5_0005514g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 6.6e-07 58.9 78 46.2
Sp6g15180 Schrenkiella parvula HOM05D002242 ORTHO05D002275 6.6e-07 58.9 118 35.6
Psat4g214600 Pisum sativum HOM05D002242 ORTHO05D002275 8.6e-07 58.5 78 43.6
arahy.Tifrunner.gnm1.ann1.EWV5Y4 Arachis hypogaea HOM05D002242 ORTHO05D002275 1.1e-06 58.2 160 36.9
BraA10t43133Z Brassica rapa HOM05D002242 ORTHO05D002275 1.1e-06 58.2 133 31.6
AUR62004507 Chenopodium quinoa HOM05D002242 ORTHO05D002275 1.1e-06 58.2 161 39.1
HanXRQChr17g0563391 Helianthus annuus HOM05D002242 ORTHO05D002275 1.1e-06 58.2 106 40.6
Lalb_Chr17g0342761 Lupinus albus HOM05D002242 ORTHO05D002275 1.1e-06 58.2 94 35.1
Phvul.001G075100 Phaseolus vulgaris HOM05D002242 ORTHO05D002275 1.5e-06 57.8 186 33.3
Sc25g0000930 Simmondsia chinensis HOM05D002242 ORTHO05D002275 1.5e-06 57.8 82 43.9
Thhalv10014570m.g Eutrema salsugineum HOM05D002242 ORTHO05D002275 1.9e-06 57.4 89 39.3
Eucgr.H01540 Eucalyptus grandis HOM05D002242 ORTHO05D002275 2.5e-06 57.0 193 35.2
Eucgr.H01594 Eucalyptus grandis HOM05D002242 ORTHO05D002275 2.5e-06 57.0 193 35.2
SGA_v2.0_scaffold44G16810 Striga asiatica HOM05D002242 ORTHO05D002275 2.5e-06 57.0 154 39.6
A03p57530 Brassica napus HOM05D002242 ORTHO05D002275 3.3e-06 56.6 108 35.2
BraA03t14821Z Brassica rapa HOM05D002242 ORTHO05D002275 3.3e-06 56.6 108 35.2
Oeu060992.1 Olea europaea HOM05D002242 ORTHO05D002275 3.3e-06 56.6 179 35.8
Peaxi162Scf00740g00136 Petunia axillaris HOM05D002242 ORTHO05D002275 3.3e-06 56.6 75 48.0
VMungo0647G2336 Vigna mungo HOM05D002242 ORTHO05D002275 3.3e-06 56.6 186 32.3
C07p55720 Brassica napus HOM05D002242 ORTHO05D002275 4.3e-06 56.2 108 35.2
BolC7t46052H Brassica oleracea HOM05D002242 ORTHO05D002275 4.3e-06 56.2 108 35.2
Glyma.16G023500 Glycine max HOM05D002242 ORTHO05D002275 4.3e-06 56.2 215 32.6
Manes.01G184600 Manihot esculenta HOM05D002242 ORTHO05D002275 4.3e-06 56.2 180 31.7
BcaC06g32661 Brassica carinata HOM05D002242 ORTHO05D002275 5.6e-06 55.8 111 36.0
MELO3C008501.2 Cucumis melo HOM05D002242 ORTHO05D002275 5.6e-06 55.8 105 41.9
Dinv37328 Davidia involucrata HOM05D002242 ORTHO05D002275 5.6e-06 55.8 93 39.8
Rhsim01G0174300 Rhododendron simsii HOM05D002242 ORTHO05D002275 5.6e-06 55.8 241 30.7
Sc01g0002560 Simmondsia chinensis HOM05D002242 ORTHO05D002275 5.6e-06 55.8 179 33.5
TWI59G0079 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 5.6e-06 55.8 106 37.7
GSVIVG01038561001 Vitis vinifera HOM05D002242 ORTHO05D002275 5.6e-06 55.8 175 35.4
Prupe.6G127900 Prunus persica HOM05D002242 ORTHO05D002275 7.3e-06 55.5 102 40.2
Rhsim07G0003200 Rhododendron simsii HOM05D002242 ORTHO05D002275 7.3e-06 55.5 148 35.1
Aa31LG7G12160 Aethionema arabicum HOM05D002242 ORTHO05D002275 9.5e-06 55.1 95 35.8
Glyma.03G258400 Glycine max HOM05D002242 ORTHO05D002275 9.5e-06 55.1 94 41.5
Manes.01G244900 Manihot esculenta HOM05D002242 ORTHO05D002275 9.5e-06 55.1 209 31.1
Sp7g25790 Schrenkiella parvula HOM05D002242 ORTHO05D002275 9.5e-06 55.1 181 30.4


User provided reference genes

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