Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 2110.1 1074 100.0
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1645.2 1080 78.8
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1629.4 1088 76.1
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1535.0 1132 71.9
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1522.3 1084 70.6
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1511.5 1093 70.1
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1510.0 1080 70.2
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1509.6 1070 70.9
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1507.3 1084 70.1
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1507.3 1082 71.3
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1506.5 1091 68.7
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1505.7 1080 71.7
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1504.6 1097 68.6
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1500.7 1087 70.6
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1499.6 1092 71.0
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1496.1 1083 69.6
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1494.9 1112 68.2
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1493.8 1093 68.9
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1490.7 1076 71.5
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1490.3 1090 69.7
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1488.4 1079 68.6
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1484.9 1097 68.5
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1484.2 1073 69.9
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1476.5 1083 68.4
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1474.1 1094 68.7
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1474.1 1073 69.4
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1470.7 1078 69.4
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1469.5 1075 70.9
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1466.1 1086 69.2
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1464.1 1077 69.3
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1463.0 1071 70.8
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1459.9 1074 69.6
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1459.9 1072 68.8
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1459.1 1073 70.9
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1458.0 1084 69.0
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1457.6 1072 68.6
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1456.8 1086 67.5
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1455.7 1071 68.9
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1455.7 1071 68.0
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1454.9 1079 68.6
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1454.1 1083 67.7
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1453.3 1086 66.8
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1449.9 1079 67.6
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1449.5 1076 68.0
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1447.2 1091 68.4
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1446.8 1080 68.4
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1446.4 1085 67.0
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1445.3 1071 69.9
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1444.9 1082 67.1
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1442.9 1072 67.8
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1441.4 1081 66.8
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1439.5 1073 67.0
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1439.1 1084 67.1
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1437.9 1076 67.9
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1437.2 1105 66.3
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1437.2 1072 67.4
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1435.6 1072 66.2
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1432.5 1068 69.0
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1431.4 1084 66.3
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1430.2 1071 68.0
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1429.5 1072 67.3
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1427.2 1072 67.2
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1426.8 1078 66.3
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1426.0 1072 68.4
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1421.0 1087 66.9
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1420.2 1084 66.3
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1419.4 1073 67.8
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1419.1 1081 66.1
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1419.1 1076 66.3
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1413.3 1072 68.0
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1412.5 1077 69.1
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1408.3 1077 66.9
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1406.0 1085 67.4
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1402.5 1076 67.3
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1399.8 1081 67.0
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1397.9 1069 67.3
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1395.9 1086 66.1
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1391.7 1114 64.6
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1387.9 1079 66.4
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1367.1 1069 66.4
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1362.8 1074 64.9
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1338.6 1216 58.9
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1317.0 940 69.9
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1317.0 969 68.6
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1314.7 1083 64.4
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1288.9 1084 61.3
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1288.9 1083 60.6
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1286.6 1082 60.8
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 0.0e+00 1273.5 1060 62.9
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1256.9 1086 59.0
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1231.5 945 66.3
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1223.4 1200 54.8
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1168.7 965 65.2
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 6.6e-311 1070.8 753 69.2
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 8.6e-303 1043.9 1078 55.5
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 3.3e-302 1042.0 751 67.6
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 8.6e-295 1017.3 748 67.8
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 3.5e-280 968.8 720 68.2
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 2.1e-272 943.0 1073 47.6
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 2.0e-259 899.8 1072 47.9
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 1.6e-248 863.6 1014 51.3
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 1.6e-240 837.0 619 70.1
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 2.5e-225 786.6 714 57.7
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 2.6e-219 766.5 1016 43.5
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 1.8e-212 743.8 536 68.1
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 8.3e-189 665.2 514 66.0
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 5.4e-180 636.0 1524 31.6
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 1.2e-176 624.8 653 51.1
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 1.0e-162 578.6 402 72.6
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 2.6e-118 431.0 336 66.1
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 4.7e-83 313.9 201 75.6
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 3.1e-50 204.9 178 59.6
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 8.1e-35 153.7 114 71.9
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 7.1e-23 114.0 59 83.1
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 2.8e-19 102.1 54 81.5
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 6.7e-13 80.9 65 53.8
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 1.1e-10 73.6 226 29.6
TPR.G10878 Trifolium pratense HOM05D020190 ORTHO05D018030 4.6e-06 58.2 71 46.5


User provided reference genes

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