Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09946 Striga asiatica HOM05D008553 ORTHO05D009562 5.0e-145 517.7 251 100.0
SGA_v2.0_scaffold220G42598 Striga asiatica HOM05D008553 ORTHO05D009562 2.5e-80 302.8 205 69.8
SGA_v2.0_scaffold268G46202 Striga asiatica HOM05D008553 ORTHO05D009562 4.3e-80 302.0 205 69.3
SGA_v2.0_scaffold39G15341 Striga asiatica HOM05D008553 ORTHO05D009562 2.8e-79 299.3 205 69.3
SGA_v2.0_scaffold112G31596 Striga asiatica HOM05D008553 ORTHO05D009562 3.7e-79 298.9 205 69.3
SGA_v2.0_scaffold33G13435 Striga asiatica HOM05D008553 ORTHO05D009562 4.0e-78 295.4 202 70.3
SGA_v2.0_scaffold330G48883 Striga asiatica HOM05D008553 ORTHO05D009562 5.3e-78 295.0 205 69.3
SGA_v2.0_scaffold113G31756 Striga asiatica HOM05D008553 ORTHO05D009562 9.0e-78 294.3 202 69.3
SGA_v2.0_scaffold91G27994 Striga asiatica HOM05D008553 ORTHO05D009562 2.0e-77 293.1 205 68.3
SGA_v2.0_scaffold112G31626 Striga asiatica HOM05D008553 ORTHO05D009562 4.5e-77 292.0 205 67.8
SGA_v2.0_scaffold9G04884 Striga asiatica HOM05D008553 ORTHO05D009562 4.5e-77 292.0 195 70.3
SGA_v2.0_scaffold217G42419 Striga asiatica HOM05D008553 ORTHO05D009562 2.2e-76 289.7 205 67.8
SGA_v2.0_scaffold26G11277 Striga asiatica HOM05D008553 ORTHO05D009562 4.9e-76 288.5 205 67.3
SGA_v2.0_scaffold35G14096 Striga asiatica HOM05D008553 ORTHO05D009562 3.3e-72 275.8 205 64.4
SGA_v2.0_scaffold57G20161 Striga asiatica HOM05D008553 ORTHO05D009562 3.1e-70 269.2 180 72.2
SGA_v2.0_scaffold179G39585 Striga asiatica HOM05D008553 ORTHO05D009562 1.2e-69 267.3 179 71.5
SGA_v2.0_scaffold8G04277 Striga asiatica HOM05D008553 ORTHO05D009562 4.5e-69 265.4 186 69.4
SGA_v2.0_scaffold18G08482 Striga asiatica HOM05D008553 ORTHO05D009562 7.4e-64 248.1 214 59.8
SGA_v2.0_scaffold33G13517 Striga asiatica HOM05D008553 ORTHO05D009562 2.8e-63 246.1 206 59.2
SGA_v2.0_scaffold27G11510 Striga asiatica HOM05D008553 ORTHO05D009562 9.0e-62 241.1 184 65.8
SGA_v2.0_scaffold41G15793 Striga asiatica HOM05D008553 ORTHO05D009562 2.2e-60 236.5 194 59.3
SGA_v2.0_scaffold17G08048 Striga asiatica HOM05D008553 ORTHO05D009562 3.2e-59 232.6 205 58.5
SGA_v2.0_scaffold1254G53882 Striga asiatica HOM05D008553 ORTHO05D009562 5.3e-54 215.3 147 69.4
SGA_v2.0_scaffold34G13605 Striga asiatica HOM05D008553 ORTHO05D009562 7.7e-53 211.5 120 81.7
SGA_v2.0_scaffold145G36007 Striga asiatica HOM05D008553 ORTHO05D009562 1.7e-52 210.3 156 64.7
SGA_v2.0_scaffold112G31559 Striga asiatica HOM05D008553 ORTHO05D009562 3.2e-51 206.1 120 80.0
SGA_v2.0_scaffold175G39311 Striga asiatica HOM05D008553 ORTHO05D009562 7.9e-50 201.4 227 50.2
SGA_v2.0_scaffold350G49636 Striga asiatica HOM05D008553 ORTHO05D009562 1.4e-46 190.7 110 80.0
SGA_v2.0_scaffold59G20614 Striga asiatica HOM05D008553 ORTHO05D009562 4.2e-43 179.1 104 79.8
SGA_v2.0_scaffold291G47339 Striga asiatica HOM05D008553 ORTHO05D009562 4.0e-41 172.6 139 58.3
SGA_v2.0_scaffold212G42188 Striga asiatica HOM05D008553 ORTHO05D009562 4.4e-40 169.1 177 50.3
SGA_v2.0_scaffold476G52146 Striga asiatica HOM05D008553 ORTHO05D009562 1.0e-36 157.9 122 64.8
SGA_v2.0_scaffold155G37235 Striga asiatica HOM05D008553 ORTHO05D009562 2.9e-36 156.4 155 51.6
SGA_v2.0_scaffold26G11425 Striga asiatica HOM05D008553 ORTHO05D009562 1.9e-35 153.7 85 82.4
SGA_v2.0_scaffold84G26566 Striga asiatica HOM05D008553 ORTHO05D009562 2.5e-35 153.3 85 83.5
SGA_v2.0_scaffold459G51953 Striga asiatica HOM05D008553 ORTHO05D009562 3.2e-35 152.9 84 83.3
SGA_v2.0_scaffold127G33998 Striga asiatica HOM05D008553 ORTHO05D009562 1.8e-30 137.1 122 56.6
SGA_v2.0_scaffold9621G54665 Striga asiatica HOM05D008553 ORTHO05D009562 3.5e-29 132.9 100 62.0
SGA_v2.0_scaffold64G22055 Striga asiatica HOM05D008553 ORTHO05D009562 8.0e-26 121.7 90 68.9
SGA_v2.0_scaffold61G21158 Striga asiatica HOM05D008553 ORTHO05D009562 1.0e-25 121.3 109 52.3
SGA_v2.0_scaffold448G51780 Striga asiatica HOM05D008515 ORTHO05D009562 1.4e-25 120.9 200 36.0
SGA_v2.0_scaffold18G08387 Striga asiatica HOM05D008515 ORTHO05D009562 4.0e-25 119.4 200 35.5
SGA_v2.0_scaffold417G51265 Striga asiatica HOM05D008553 ORTHO05D009562 2.6e-24 116.7 68 77.9
SGA_v2.0_scaffold235G43710 Striga asiatica HOM05D008553 ORTHO05D009562 5.7e-24 115.5 107 54.2
SGA_v2.0_scaffold21G09321 Striga asiatica HOM05D008515 ORTHO05D009562 1.7e-23 114.0 213 35.7
SGA_v2.0_scaffold68G22882 Striga asiatica HOM05D008553 ORTHO05D009562 1.1e-22 111.3 114 50.0
SGA_v2.0_scaffold61G21228 Striga asiatica HOM05D008515 ORTHO05D009562 1.4e-22 110.9 200 34.5
SGA_v2.0_scaffold284G47030 Striga asiatica HOM05D008553 ORTHO05D009562 4.5e-21 105.9 68 72.1
SGA_v2.0_scaffold290G47292 Striga asiatica HOM05D008553 ORTHO05D009562 3.8e-20 102.8 114 49.1
SGA_v2.0_scaffold162G37931 Striga asiatica HOM05D008515 ORTHO05D009562 8.6e-20 101.7 201 34.8
SGA_v2.0_scaffold103G30017 Striga asiatica HOM05D008515 ORTHO05D009562 1.1e-19 101.3 227 30.8
SGA_v2.0_scaffold395G50734 Striga asiatica HOM05D008515 ORTHO05D009562 3.3e-19 99.8 197 29.4
SGA_v2.0_scaffold14G06993 Striga asiatica HOM05D008515 ORTHO05D009562 2.8e-18 96.7 243 26.3
SGA_v2.0_scaffold47G17589 Striga asiatica HOM05D008515 ORTHO05D009562 2.8e-18 96.7 179 32.4
SGA_v2.0_scaffold53G19373 Striga asiatica HOM05D008515 ORTHO05D009562 6.1e-18 95.5 169 32.5
SGA_v2.0_scaffold458G51936 Striga asiatica HOM05D008515 ORTHO05D009562 2.3e-17 93.6 179 31.8
SGA_v2.0_scaffold158G37510 Striga asiatica HOM05D008553 ORTHO05D009562 3.0e-17 93.2 96 50.0
SGA_v2.0_scaffold129G34169 Striga asiatica HOM05D008515 ORTHO05D009562 1.5e-16 90.9 197 27.9
SGA_v2.0_scaffold235G43682 Striga asiatica HOM05D008515 ORTHO05D009562 2.0e-16 90.5 178 29.2
SGA_v2.0_scaffold441G51668 Striga asiatica HOM05D008515 ORTHO05D009562 8.3e-15 85.1 197 27.9
SGA_v2.0_scaffold315G48384 Striga asiatica HOM05D008515 ORTHO05D009562 1.1e-14 84.7 101 38.6
SGA_v2.0_scaffold554G52901 Striga asiatica HOM05D008515 ORTHO05D009562 1.8e-14 84.0 110 35.5
SGA_v2.0_scaffold377G50311 Striga asiatica HOM05D008515 ORTHO05D009562 4.1e-14 82.8 112 37.5
SGA_v2.0_scaffold82G26184 Striga asiatica HOM05D008515 ORTHO05D009562 2.7e-13 80.1 90 40.0
SGA_v2.0_scaffold43G16242 Striga asiatica HOM05D008515 ORTHO05D009562 3.5e-13 79.7 104 34.6
SalBow1G7207 Salvia bowleyana HOM05D009014 ORTHO05D358742 4.6e-13 79.3 174 29.3
SGA_v2.0_scaffold34G13686 Striga asiatica HOM05D008553 ORTHO05D009562 4.6e-13 79.3 44 75.0
SGA_v2.0_scaffold462G51975 Striga asiatica HOM05D008515 ORTHO05D009562 4.6e-13 79.3 188 28.7
SGA_v2.0_scaffold65G22151 Striga asiatica HOM05D008515 ORTHO05D009562 5.9e-13 79.0 162 34.0
SGA_v2.0_scaffold554G52899 Striga asiatica HOM05D008515 ORTHO05D009562 3.0e-12 76.6 113 31.0
SGA_v2.0_scaffold1G00568 Striga asiatica HOM05D023376 ORTHO05D009562 3.6e-10 69.7 223 27.4
SGA_v2.0_scaffold83G26385 Striga asiatica HOM05D000331 ORTHO05D002018 6.2e-10 68.9 40 85.0
SGA_v2.0_scaffold36G14532 Striga asiatica HOM05D008553 ORTHO05D009562 8.0e-10 68.6 65 52.3
SalBow8G5484 Salvia bowleyana HOM05D015342 ORTHO05D015740 4.0e-09 66.2 197 27.9
SGA_v2.0_scaffold194G40740 Striga asiatica HOM05D008515 ORTHO05D009562 5.2e-09 65.9 190 26.8
SalBow8G5486 Salvia bowleyana HOM05D015342 ORTHO05D015740 6.8e-09 65.5 206 26.7
SGA_v2.0_scaffold6G03400 Striga asiatica HOM05D008515 ORTHO05D009562 8.9e-09 65.1 165 28.5
SGA_v2.0_scaffold317G48438 Striga asiatica HOM05D008515 ORTHO05D009562 1.2e-08 64.7 198 25.3
Lsat_1_v5_gn_9_115801 Lactuca sativa HOM05D000331 ORTHO05D002018 1.5e-08 64.3 77 48.1
SGA_v2.0_scaffold132G34550 Striga asiatica HOM05D008515 ORTHO05D009562 5.8e-08 62.4 151 29.1
ECA240G1861 Erigeron canadensis HOM05D000331 ORTHO05D002018 7.5e-08 62.0 77 45.5
SHI04933 Sapria himalayana HOM05D000331 ORTHO05D002018 9.8e-08 61.6 40 72.5
SGA_v2.0_scaffold19G08747 Striga asiatica HOM05D008515 ORTHO05D009562 9.8e-08 61.6 146 28.1
SGA_v2.0_scaffold267G46186 Striga asiatica HOM05D008515 ORTHO05D009562 1.3e-07 61.2 140 29.3
SGA_v2.0_scaffold235G43681 Striga asiatica HOM05D008515 ORTHO05D009562 1.7e-07 60.8 127 29.1
CAN.G1041.36 Capsicum annuum HOM05D000331 ORTHO05D002018 2.9e-07 60.1 40 70.0
TAR376G0912 Trochodendron aralioides HOM05D000331 ORTHO05D002018 2.9e-07 60.1 74 48.6
HanXRQChr16g0514511 Helianthus annuus HOM05D000331 ORTHO05D002018 3.7e-07 59.7 74 48.6
Lsat_1_v5_gn_5_110221 Lactuca sativa HOM05D000331 ORTHO05D002018 3.7e-07 59.7 74 45.9
Lj5C229G23 Lonicera japonica HOM05D000331 ORTHO05D002018 3.7e-07 59.7 76 46.1
ECA234G3483 Erigeron canadensis HOM05D000331 ORTHO05D002018 4.9e-07 59.3 74 47.3
ECA240G3290 Erigeron canadensis HOM05D000331 ORTHO05D002018 4.9e-07 59.3 77 45.5
PGR142G4428 Punica granatum HOM05D000331 ORTHO05D002018 4.9e-07 59.3 40 67.5
Sabra07G0095600 Salix brachista HOM05D000331 ORTHO05D002018 4.9e-07 59.3 74 44.6
CAN.G672.8 Capsicum annuum HOM05D000331 ORTHO05D002018 6.4e-07 58.9 40 70.0
Oeu010521.1 Olea europaea HOM05D000331 ORTHO05D002018 6.4e-07 58.9 76 44.7
Sed0001354 Sechium edule HOM05D000331 ORTHO05D002018 6.4e-07 58.9 40 70.0
CAN.G504.84 Capsicum annuum HOM05D000331 ORTHO05D002018 8.3e-07 58.5 40 70.0
Solyc01g106050.4 Solanum lycopersicum HOM05D000331 ORTHO05D002018 8.3e-07 58.5 40 70.0
Sopen01g048430 Solanum pennellii HOM05D000331 ORTHO05D002018 8.3e-07 58.5 40 70.0
Cc02_g20790 Coffea canephora HOM05D000331 ORTHO05D002018 1.1e-06 58.2 74 45.9
Oeu059904.1 Olea europaea HOM05D000331 ORTHO05D002018 1.1e-06 58.2 76 43.4
Lsat_1_v5_gn_1_4500 Lactuca sativa HOM05D000331 ORTHO05D002018 1.4e-06 57.8 45 60.0
Nn5g29832 Nelumbo nucifera HOM05D000331 ORTHO05D002018 1.4e-06 57.8 74 44.6
GSVIVG01012532001 Vitis vinifera HOM05D000331 ORTHO05D002018 1.4e-06 57.8 74 45.9
HanXRQChr03g0073971 Helianthus annuus HOM05D000331 ORTHO05D002018 1.9e-06 57.4 55 56.4
Oeu059903.1 Olea europaea HOM05D000331 ORTHO05D002018 2.4e-06 57.0 40 65.0
Migut.N01101 Erythranthe guttata HOM05D000331 ORTHO05D002018 3.2e-06 56.6 75 44.0
MBI16_g06009_MAGBIO Magnolia biondii HOM05D000331 ORTHO05D002018 3.2e-06 56.6 74 45.9
SalBow5G4497 Salvia bowleyana HOM05D015342 ORTHO05D015740 3.2e-06 56.6 135 31.9
SGA_v2.0_scaffold219G42558 Striga asiatica HOM05D000331 ORTHO05D002018 3.2e-06 56.6 66 48.5
TWI14G0887 Tripterygium wilfordii HOM05D000331 ORTHO05D002018 3.2e-06 56.6 74 41.9
Actinidia28025 Actinidia chinensis HOM05D000331 ORTHO05D002018 4.1e-06 56.2 43 58.1
ATR0767G113 Amborella trichopoda HOM05D000331 ORTHO05D002018 4.1e-06 56.2 89 42.7
Dinv16009 Davidia involucrata HOM05D000331 ORTHO05D002018 4.1e-06 56.2 32 81.2
Eucgr.I02611 Eucalyptus grandis HOM05D000331 ORTHO05D002018 4.1e-06 56.2 40 60.0
Lalb_Chr18g0060391 Lupinus albus HOM05D000331 ORTHO05D002018 4.1e-06 56.2 42 61.9
TWI59G0920 Tripterygium wilfordii HOM05D000331 ORTHO05D002018 4.1e-06 56.2 74 41.9
Actinidia02400 Actinidia chinensis HOM05D000331 ORTHO05D002018 5.4e-06 55.8 75 44.0
MSTRG.27817 Avicennia marina HOM05D000331 ORTHO05D002018 5.4e-06 55.8 76 42.1
Dinv24142 Davidia involucrata HOM05D000331 ORTHO05D002018 5.4e-06 55.8 73 46.6
Lsat_1_v5_gn_8_4760 Lactuca sativa HOM05D000331 ORTHO05D002018 5.4e-06 55.8 54 53.7
Sed0011391 Sechium edule HOM05D000331 ORTHO05D002018 5.4e-06 55.8 44 63.6
Sopen11g019650 Solanum pennellii HOM05D000331 ORTHO05D002018 5.4e-06 55.8 74 43.2
Ciclev10027825m.g Citrus clementina HOM05D000331 ORTHO05D002018 7.0e-06 55.5 66 47.0
MELO3C018587.2 Cucumis melo HOM05D000331 ORTHO05D002018 7.0e-06 55.5 40 65.0
CsaV3_7G007070 Cucumis sativus L. HOM05D000331 ORTHO05D002018 7.0e-06 55.5 40 65.0
Lalb_Chr15g0090321 Lupinus albus HOM05D000331 ORTHO05D002018 7.0e-06 55.5 40 65.0
MBI16_g30316_MAGBIO Magnolia biondii HOM05D000331 ORTHO05D002018 7.0e-06 55.5 74 44.6
TAR628G0314 Trochodendron aralioides HOM05D000331 ORTHO05D002018 7.0e-06 55.5 74 41.9
Atru.chr6.1299 Acer truncatum HOM05D000331 ORTHO05D002018 9.2e-06 55.1 74 41.9
Lsat_1_v5_gn_5_178781 Lactuca sativa HOM05D000331 ORTHO05D002018 9.2e-06 55.1 52 55.8
Lsat_1_v5_gn_5_55501 Lactuca sativa HOM05D000331 ORTHO05D002018 9.2e-06 55.1 52 55.8
Manes.07G041100 Manihot esculenta HOM05D000331 ORTHO05D002018 9.2e-06 55.1 74 43.2
Nitab4.5_0001773g0030 Nicotiana tabacum HOM05D000331 ORTHO05D002018 9.2e-06 55.1 32 81.2
Nitab4.5_0007950g0010 Nicotiana tabacum HOM05D000331 ORTHO05D002018 9.2e-06 55.1 32 81.2


User provided reference genes

Program Settings