Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 1.3e-202 709.5 357 100.0
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.0e-95 354.4 412 54.6
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 4.1e-76 289.3 381 48.6
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 1.2e-72 277.7 389 47.3
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 2.0e-70 270.4 401 43.9
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 1.9e-68 263.8 405 44.7
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 7.0e-68 261.9 422 42.7
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 2.0e-67 260.4 390 45.9
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 1.0e-66 258.1 410 44.9
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 6.2e-64 248.8 420 43.1
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 1.1e-63 248.1 387 43.7
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 1.1e-63 248.1 426 42.5
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.4e-63 247.7 428 42.5
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 1.4e-63 247.7 418 42.1
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 2.3e-63 246.9 403 43.7
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 2.2e-61 240.4 399 42.4
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 1.1e-60 238.0 417 40.8
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 1.1e-60 238.0 406 42.1
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 5.4e-60 235.7 408 41.9
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 5.4e-60 235.7 405 42.2
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 7.1e-60 235.3 392 41.3
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 7.1e-60 235.3 363 43.8
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 1.6e-59 234.2 418 39.5
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 2.7e-59 233.4 408 41.7
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 2.7e-59 233.4 403 42.2
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 3.5e-59 233.0 363 43.3
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 4.6e-59 232.6 424 40.1
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.0e-58 231.5 363 43.8
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 2.3e-58 230.3 403 42.4
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 2.3e-58 230.3 384 41.7
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 3.0e-58 229.9 393 43.0
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 5.1e-58 229.2 405 41.0
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 8.6e-58 228.4 376 42.3
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.1e-57 228.0 416 39.9
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 7.3e-57 225.3 289 49.8
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 9.5e-57 224.9 460 38.9
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 9.5e-57 224.9 369 43.9
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 1.2e-56 224.6 443 39.1
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 2.1e-56 223.8 375 42.4
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 3.6e-56 223.0 395 43.0
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 8.9e-55 218.4 408 39.0
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 2.6e-54 216.9 421 40.6
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 5.8e-54 215.7 401 39.9
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 5.8e-54 215.7 395 42.0
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 9.9e-54 214.9 386 41.5
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 9.9e-54 214.9 362 40.3
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 2.9e-53 213.4 337 42.4
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 1.9e-52 210.7 389 40.1
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 3.2e-52 209.9 409 38.6
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 2.1e-51 207.2 420 40.2
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 2.1e-51 207.2 369 39.0
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 3.5e-51 206.5 385 40.3
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 1.0e-50 204.9 374 41.2
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 2.3e-50 203.8 307 45.6
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 5.1e-50 202.6 383 38.9
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.8e-47 194.1 404 40.3
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 1.8e-47 194.1 442 36.0
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 1.8e-47 194.1 356 40.4
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 3.1e-47 193.4 345 40.3
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 1.5e-46 191.0 291 46.4
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.0e-46 190.7 403 34.7
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 5.8e-46 189.1 393 38.7
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 7.6e-46 188.7 369 39.0
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 1.7e-45 187.6 302 39.7
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 1.2e-43 181.4 366 36.3
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 3.5e-43 179.9 434 34.6
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 6.0e-43 179.1 306 42.8
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 3.3e-41 173.3 354 37.3
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 9.6e-41 171.8 468 33.5
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 2.8e-40 170.2 383 36.8
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 8.1e-40 168.7 423 35.0
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 5.3e-39 166.0 388 35.6
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 6.9e-39 165.6 368 37.0
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 1.5e-38 164.5 214 44.9
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 2.9e-37 160.2 414 38.2
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 3.8e-37 159.8 341 36.1
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 2.4e-36 157.1 359 34.3
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 2.4e-36 157.1 404 36.1
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 1.3e-34 151.4 326 35.9
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.3e-34 151.4 372 35.8
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 3.9e-34 149.8 309 35.3
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 8.7e-34 148.7 367 35.4
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 3.7e-32 143.3 328 35.4
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 4.8e-32 142.9 329 36.8
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 1.1e-31 141.7 344 35.8
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 1.2e-30 138.3 383 33.2
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 1.2e-30 138.3 342 34.2
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 4.5e-30 136.3 326 35.9
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 1.7e-29 134.4 356 32.3
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 2.2e-29 134.0 374 32.6
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 4.9e-29 132.9 299 37.5
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.4e-28 131.3 359 34.3
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 2.1e-27 127.5 324 33.3
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.7e-27 127.1 158 48.1
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 2.7e-27 127.1 432 31.0
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 3.0e-26 123.6 117 50.4
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 8.7e-26 122.1 290 36.2
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 2.5e-25 120.6 379 32.5
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 7.4e-25 119.0 276 35.5
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 3.4e-22 110.2 106 51.9
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 4.5e-22 109.8 265 33.2
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 5.8e-22 109.4 177 40.1
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 9.3e-20 102.1 303 33.3
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 9.3e-20 102.1 303 33.3
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 1.6e-19 101.3 339 29.8
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea HOM05D005213 ORTHO05D006229 6.0e-19 99.4 328 28.7
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 1.3e-18 98.2 292 33.2
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 1.3e-18 98.2 292 33.2
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.3e-18 98.2 293 33.4
SGA_v2.0_scaffold4G02181 Striga asiatica HOM05D005213 ORTHO05D006229 2.3e-18 97.4 359 32.3
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 6.7e-18 95.9 291 32.6
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 1.1e-17 95.1 264 34.5
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 1.9e-17 94.4 297 32.7
Migut.E01467 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.9e-17 94.4 277 33.2
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 2.5e-17 94.0 293 33.4
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 2.5e-17 94.0 247 34.4
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 5.7e-17 92.8 291 33.0
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 5.7e-17 92.8 291 33.0
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 1.3e-16 91.7 374 29.4
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 1.3e-16 91.7 298 32.6
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea HOM05D005213 ORTHO05D006229 1.6e-16 91.3 326 28.8
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 1.4e-15 88.2 290 31.7
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 1.8e-15 87.8 137 47.4
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 1.8e-15 87.8 310 31.9
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 4.1e-15 86.7 358 27.4
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 5.3e-15 86.3 308 31.2
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 6.9e-15 85.9 308 30.8
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 2.0e-14 84.3 275 32.4
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 4.5e-14 83.2 135 45.9
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 7.6e-14 82.4 303 30.4
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 1.0e-13 82.0 303 30.4
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 1.3e-13 81.6 259 32.0
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 1.7e-13 81.3 350 28.6
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 3.8e-13 80.1 100 54.0
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 5.0e-13 79.7 362 28.5
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 5.0e-13 79.7 302 29.8
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 6.5e-13 79.3 350 29.7
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.5e-12 77.4 177 38.4
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 2.7e-11 73.9 168 41.7
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 7.9e-11 72.4 442 23.5
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 2.3e-10 70.9 392 25.0
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 1.5e-09 68.2 45 82.2
CsaV3_4G036220 Cucumis sativus L. HOM05D005213 ORTHO05D006229 5.7e-09 66.2 301 29.2
unitig_0.g2816 Utricularia gibba HOM05D005213 ORTHO05D006229 1.7e-08 64.7 319 25.7
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 1.4e-07 61.6 191 34.0
MELO3C016931.2 Cucumis melo HOM05D005213 ORTHO05D006229 5.3e-07 59.7 301 29.2
ClCG05G015950 Citrullus lanatus HOM05D005213 ORTHO05D006229 9.1e-07 58.9 278 28.4
HPP92_004172 Vanilla planifolia HOM05D001722 ORTHO05D001910 3.4e-06 57.0 246 22.4


User provided reference genes

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