Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.1e-107 393.3 189 100.0
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 6.0e-66 254.6 149 79.9
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 7.8e-66 254.2 149 79.9
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 3.9e-65 251.9 149 78.5
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 1.1e-64 250.4 142 81.7
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 2.5e-64 249.2 149 77.9
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 4.3e-64 248.4 168 70.2
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 7.3e-64 247.7 149 78.5
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 7.3e-64 247.7 142 79.6
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 9.5e-64 247.3 149 77.9
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 9.5e-64 247.3 168 70.2
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 1.2e-63 246.9 149 77.2
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.2e-63 246.9 168 69.6
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 1.2e-63 246.9 168 70.8
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 1.6e-63 246.5 149 77.2
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 2.1e-63 246.1 168 69.6
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 2.8e-63 245.7 167 70.1
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 6.2e-63 244.6 149 77.2
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.1e-62 243.8 147 75.5
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.4e-62 243.4 140 81.4
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 2.3e-62 242.7 149 77.2
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 3.1e-62 242.3 149 77.9
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 3.1e-62 242.3 149 76.5
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 3.1e-62 242.3 142 79.6
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 5.2e-62 241.5 141 79.4
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 6.8e-62 241.1 146 78.1
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 8.9e-62 240.7 140 79.3
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 8.9e-62 240.7 138 79.7
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 1.2e-61 240.4 149 77.2
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 1.2e-61 240.4 144 78.5
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 2.0e-61 239.6 147 73.5
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 2.6e-61 239.2 142 78.2
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 3.4e-61 238.8 142 77.5
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 3.4e-61 238.8 148 75.7
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 4.4e-61 238.4 149 75.8
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 9.8e-61 237.3 149 74.5
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 9.8e-61 237.3 149 74.5
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 9.8e-61 237.3 150 76.0
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 1.7e-60 236.5 137 79.6
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 1.7e-60 236.5 137 79.6
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.7e-60 236.5 135 80.7
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.7e-60 236.5 142 76.8
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.7e-60 236.5 149 75.2
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 1.7e-60 236.5 149 75.8
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.9e-60 235.7 149 73.8
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 3.7e-60 235.3 149 73.2
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 4.9e-60 235.0 142 75.4
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 8.3e-60 234.2 150 74.0
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 8.3e-60 234.2 138 79.7
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 1.1e-59 233.8 151 75.5
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 1.9e-59 233.0 147 75.5
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 2.4e-59 232.6 141 77.3
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 2.4e-59 232.6 150 76.0
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 2.4e-59 232.6 141 76.6
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 2.4e-59 232.6 141 76.6
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 3.2e-59 232.3 141 74.5
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 3.2e-59 232.3 151 75.5
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.2e-59 232.3 149 73.8
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 5.4e-59 231.5 149 74.5
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 7.0e-59 231.1 150 75.3
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 7.0e-59 231.1 141 75.2
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 7.0e-59 231.1 142 76.8
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 7.0e-59 231.1 150 73.3
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 7.0e-59 231.1 141 76.6
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 2.1e-58 229.6 141 73.8
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 2.7e-58 229.2 142 73.9
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.5e-58 228.8 142 75.4
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 3.5e-58 228.8 141 76.6
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 6.0e-58 228.0 142 74.6
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 6.0e-58 228.0 155 70.3
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 7.8e-58 227.6 150 74.0
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 1.7e-57 226.5 155 68.4
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 2.3e-57 226.1 150 73.3
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 6.6e-57 224.6 148 73.6
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 7.3e-56 221.1 142 74.6
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 1.2e-55 220.3 141 72.3
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.6e-55 219.9 149 70.5
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.6e-55 219.9 149 70.5
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 1.4e-54 216.9 137 73.0
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 2.6e-53 212.6 139 71.9
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.6e-53 212.6 149 67.8
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 3.4e-53 212.2 143 69.2
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 7.5e-53 211.1 149 67.1
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 7.5e-53 211.1 139 71.9
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 9.9e-53 210.7 139 71.9
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 1.3e-52 210.3 139 71.2
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 1.3e-52 210.3 143 67.1
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 1.7e-52 209.9 146 68.5
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 2.2e-52 209.5 141 70.2
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 2.9e-52 209.1 138 71.0
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 3.7e-52 208.8 143 66.4
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 1.1e-51 207.2 139 70.5
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 1.1e-51 207.2 139 70.5
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 1.1e-51 207.2 141 68.1
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 1.4e-51 206.8 143 65.0
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 1.9e-51 206.5 139 70.5
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 2.7e-50 202.6 132 72.7
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 2.6e-45 186.0 107 79.4
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 7.6e-45 184.5 137 65.0
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 9.9e-45 184.1 146 63.7
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 8.7e-41 171.0 136 61.8


User provided reference genes

Program Settings