Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 8.5e-221 770.0 383 100.0
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 3.3e-164 582.0 401 75.1
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.3e-160 570.1 394 73.6
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 8.7e-157 557.4 400 73.8
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 4.5e-145 518.5 383 68.4
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 1.9e-143 513.1 404 65.3
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 3.5e-142 508.8 383 66.6
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 8.7e-141 504.2 383 66.3
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 8.2e-139 497.7 407 62.7
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 3.1e-138 495.7 384 65.1
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 3.1e-138 495.7 395 63.5
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 9.0e-138 494.2 383 66.6
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 9.0e-138 494.2 401 63.1
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.2e-137 493.8 399 63.2
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 1.5e-137 493.4 318 74.8
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 2.0e-137 493.0 404 63.4
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.0e-136 490.7 332 70.5
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.0e-136 490.7 332 70.5
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 3.8e-136 488.8 383 64.8
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.9e-135 486.5 383 65.3
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 1.9e-135 486.5 330 68.5
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 2.5e-135 486.1 336 69.0
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 5.5e-135 485.0 331 71.3
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 1.2e-134 483.8 398 62.1
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 1.6e-134 483.4 403 63.5
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 3.6e-134 482.3 326 70.2
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 4.6e-134 481.9 399 62.9
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 4.6e-134 481.9 399 62.2
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 6.1e-134 481.5 400 62.0
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.0e-133 480.7 400 62.5
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 1.4e-133 480.3 399 62.9
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 1.4e-133 480.3 333 69.4
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 1.4e-133 480.3 323 70.9
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.3e-133 479.6 333 69.7
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 3.0e-133 479.2 396 62.1
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 3.0e-133 479.2 330 68.5
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 3.9e-133 478.8 365 64.4
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 8.8e-133 477.6 335 67.8
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 1.1e-132 477.2 324 69.4
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 1.5e-132 476.9 323 70.3
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 2.0e-132 476.5 394 62.7
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.5e-132 476.1 362 63.3
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 3.3e-132 475.7 386 65.3
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 3.3e-132 475.7 331 69.2
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 9.7e-132 474.2 399 60.7
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 9.7e-132 474.2 322 68.6
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 1.7e-131 473.4 332 68.1
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 1.7e-131 473.4 406 61.3
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 2.2e-131 473.0 322 68.6
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 2.8e-131 472.6 320 69.4
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 2.8e-131 472.6 402 62.4
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 8.2e-131 471.1 397 61.5
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 8.2e-131 471.1 398 60.3
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.1e-130 470.7 322 68.3
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 1.1e-130 470.7 323 70.3
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 2.4e-130 469.5 400 61.5
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 3.1e-130 469.2 308 73.4
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 4.1e-130 468.8 333 67.9
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 6.9e-130 468.0 386 63.0
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 9.1e-130 467.6 382 63.6
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 9.1e-130 467.6 382 63.9
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 1.5e-129 466.8 400 59.8
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 1.5e-129 466.8 399 62.9
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 2.0e-129 466.5 314 69.4
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 2.0e-129 466.5 400 60.0
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 3.4e-129 465.7 311 69.8
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 7.7e-129 464.5 321 67.9
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 1.0e-128 464.2 382 61.8
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 1.3e-128 463.8 400 59.2
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 1.3e-128 463.8 382 61.8
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.3e-128 463.8 326 66.3
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 1.3e-128 463.8 398 59.5
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 2.2e-128 463.0 382 61.5
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 2.9e-128 462.6 382 60.5
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 2.9e-128 462.6 400 60.0
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 5.0e-128 461.8 397 61.0
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 5.0e-128 461.8 326 66.9
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 6.5e-128 461.5 400 61.2
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 6.5e-128 461.5 386 63.7
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 8.5e-128 461.1 384 63.3
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 8.5e-128 461.1 334 66.2
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.1e-127 460.7 334 65.9
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 4.2e-127 458.8 326 66.6
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 9.4e-127 457.6 397 57.9
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 1.6e-126 456.8 389 62.0
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 2.1e-126 456.4 391 61.9
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 4.7e-126 455.3 328 65.5
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 1.7e-123 446.8 387 58.7
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 2.2e-123 446.4 312 67.6
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 6.3e-123 444.9 326 64.7
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 8.0e-118 427.9 433 52.0
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 6.7e-117 424.9 331 61.0
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 8.8e-117 424.5 401 55.9
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 1.7e-115 420.2 312 65.1
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.2e-113 414.1 292 67.8
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 1.7e-112 410.2 403 55.3
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 1.2e-110 404.1 286 67.1
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 2.8e-107 392.9 407 52.1
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 6.3e-107 391.7 301 62.5
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 9.2e-98 361.3 332 57.8
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 2.1e-94 350.1 370 48.4
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 1.0e-93 347.8 360 50.0
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 5.2e-93 345.5 336 55.1
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.6e-92 343.2 248 65.3
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.2e-89 334.3 305 53.4
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.6e-89 334.0 305 53.8
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 7.8e-81 305.1 226 67.7
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 9.3e-50 201.8 385 38.4
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.8e-37 161.0 99 68.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 1.5e-31 141.4 92 70.7
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 1.0e-24 118.6 165 42.4
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.8e-24 117.9 256 32.0
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 3.1e-21 107.1 77 61.0
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 7.7e-20 102.4 65 66.2
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.2e-17 95.1 125 48.8
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.7e-17 94.0 48 87.5
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 1.3e-11 75.1 52 65.4
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 5.5e-10 69.7 128 34.4


User provided reference genes

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