Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09859 Striga asiatica HOM05D006639 ORTHO05D008339 1.2e-67 260.0 159 100.0
Migut.D02442 Erythranthe guttata HOM05D006639 ORTHO05D008339 4.0e-47 191.8 160 70.6
MSTRG.18760 Avicennia marina HOM05D006639 ORTHO05D008339 2.0e-46 189.5 154 70.8
Cc01_g09080 Coffea canephora HOM05D006639 ORTHO05D008339 2.1e-40 169.5 115 76.5
Oeu022427.1 Olea europaea HOM05D006639 ORTHO05D008339 4.0e-39 165.2 150 61.3
Oeu031474.1 Olea europaea HOM05D006639 ORTHO05D008339 2.6e-38 162.5 122 70.5
HanXRQChr14g0438101 Helianthus annuus HOM05D006639 ORTHO05D008339 4.4e-38 161.8 115 77.4
unitig_37.g12892 Utricularia gibba HOM05D006639 ORTHO05D008339 1.3e-37 160.2 151 62.9
Ciclev10029525m.g Citrus clementina HOM05D006639 ORTHO05D008339 3.7e-37 158.7 114 71.9
PGR119G2179 Punica granatum HOM05D006639 ORTHO05D008339 3.7e-37 158.7 118 72.9
Nitab4.5_0000755g0110 Nicotiana tabacum HOM05D006639 ORTHO05D008339 6.4e-37 157.9 108 76.9
CSS0034800 Camellia sinensis var. sinensis HOM05D006639 ORTHO05D008339 8.3e-37 157.5 145 62.8
Peaxi162Scf00040g00018 Petunia axillaris HOM05D006639 ORTHO05D008339 1.1e-36 157.1 155 58.7
Nitab4.5_0010969g0010 Nicotiana tabacum HOM05D006639 ORTHO05D008339 1.4e-36 156.8 121 71.9
Glyma.11G183100 Glycine max HOM05D006639 ORTHO05D008339 2.4e-36 156.0 137 65.0
Sopen11g027190 Solanum pennellii HOM05D006639 ORTHO05D008339 2.4e-36 156.0 131 69.5
Lj3g0014332 Lotus japonicus HOM05D006639 ORTHO05D008339 4.6e-35 151.8 129 65.1
Solyc11g068480.2 Solanum lycopersicum HOM05D006639 ORTHO05D008339 4.6e-35 151.8 164 58.5
Lsat_1_v5_gn_2_59441 Lactuca sativa HOM05D006639 ORTHO05D008339 6.0e-35 151.4 112 74.1
VMungo1127G0544 Vigna mungo HOM05D006639 ORTHO05D008339 6.0e-35 151.4 140 61.4
arahy.Tifrunner.gnm1.ann1.UG6V14 Arachis hypogaea HOM05D006639 ORTHO05D008339 7.8e-35 151.0 145 58.6
Lalb_Chr19g0136451 Lupinus albus HOM05D006639 ORTHO05D008339 7.8e-35 151.0 116 69.0
Thecc.09G282700 Theobroma cacao HOM05D006639 ORTHO05D008339 2.3e-34 149.4 140 60.7
TAR636G3315 Trochodendron aralioides HOM05D006639 ORTHO05D008339 2.3e-34 149.4 142 59.9
Rhsim13G0112100 Rhododendron simsii HOM05D006639 ORTHO05D008339 3.0e-34 149.1 162 59.3
PGSC0003DMG400026357 Solanum tuberosum HOM05D006639 ORTHO05D008339 3.9e-34 148.7 155 60.0
GSVIVG01036120001 Vitis vinifera HOM05D006639 ORTHO05D008339 3.9e-34 148.7 150 58.0
arahy.Tifrunner.gnm1.ann1.I7PXCJ Arachis hypogaea HOM05D006639 ORTHO05D008339 5.1e-34 148.3 145 58.6
Psat7g187880 Pisum sativum HOM05D006639 ORTHO05D008339 5.1e-34 148.3 107 73.8
vmacro03320 Vaccinium macrocarpon HOM05D006639 ORTHO05D008339 5.1e-34 148.3 121 70.2
Duzib168G1184 Durio zibethinus HOM05D006639 ORTHO05D008339 6.6e-34 147.9 113 69.0
Phvul.011G094600 Phaseolus vulgaris HOM05D006639 ORTHO05D008339 6.6e-34 147.9 137 61.3
Manes.11G162100 Manihot esculenta HOM05D006639 ORTHO05D008339 8.6e-34 147.5 115 65.2
Medtr4g052950 Medicago truncatula HOM05D006639 ORTHO05D008339 8.6e-34 147.5 107 73.8
Ca_19409_v3 Cicer arietinum L. HOM05D006639 ORTHO05D008339 1.5e-33 146.7 144 60.4
Glyma.12G089400 Glycine max HOM05D006639 ORTHO05D008339 3.3e-33 145.6 137 60.6
Gorai.009G085200 Gossypium raimondii HOM05D006639 ORTHO05D008339 3.3e-33 145.6 138 58.0
Eucgr.J00499 Eucalyptus grandis HOM05D006639 ORTHO05D008339 4.3e-33 145.2 112 70.5
DCAR_010346 Daucus carota HOM05D006639 ORTHO05D008339 5.6e-33 144.8 149 59.1
FAN25G3607 Fragaria x ananassa HOM05D006639 ORTHO05D008339 7.3e-33 144.4 114 66.7
Hund18759 Selenicereus undatus HOM05D006639 ORTHO05D008339 9.5e-33 144.1 139 59.7
TPR.G17231 Trifolium pratense HOM05D006639 ORTHO05D008339 9.5e-33 144.1 141 60.3
CANSAT56G0593 Cannabis sativa HOM05D006639 ORTHO05D008339 1.2e-32 143.7 151 55.6
CANSAT56G1587 Cannabis sativa HOM05D006639 ORTHO05D008339 1.2e-32 143.7 151 55.6
CAN.G1524.3 Capsicum annuum HOM05D006639 ORTHO05D008339 1.2e-32 143.7 156 61.5
FAN16G2085 Fragaria x ananassa HOM05D006639 ORTHO05D008339 1.2e-32 143.7 113 68.1
MELO3C014503.2 Cucumis melo HOM05D006639 ORTHO05D008339 2.1e-32 142.9 115 66.1
Gohir.D05G083500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 2.1e-32 142.9 138 57.2
Gohir.A05G080500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 2.8e-32 142.5 114 69.3
Nn6g34885 Nelumbo nucifera HOM05D006639 ORTHO05D008339 3.6e-32 142.1 149 55.0
EL10Ac7g15828 Beta vulgaris HOM05D006639 ORTHO05D008339 4.7e-32 141.7 160 55.6
FvH4_3g24950 Fragaria vesca HOM05D006639 ORTHO05D008339 4.7e-32 141.7 110 69.1
Potri.009G163500 Populus trichocarpa HOM05D006639 ORTHO05D008339 4.7e-32 141.7 115 66.1
FAN21G1301 Fragaria x ananassa HOM05D006639 ORTHO05D008339 6.2e-32 141.4 111 67.6
Ah.15g095860 Amaranthus hybridus HOM05D006639 ORTHO05D008339 8.1e-32 141.0 135 60.0
CsaV3_6G038390 Cucumis sativus L. HOM05D006639 ORTHO05D008339 8.1e-32 141.0 139 58.3
Lj2A946T24 Lonicera japonica HOM05D006639 ORTHO05D008339 1.1e-31 140.6 101 74.3
Lj2A964T5 Lonicera japonica HOM05D006639 ORTHO05D008339 1.1e-31 140.6 103 72.8
ECA238G3612 Erigeron canadensis HOM05D006639 ORTHO05D008339 1.4e-31 140.2 105 71.4
THA.LOC104826426 Tarenaya hassleriana HOM05D006639 ORTHO05D008339 8.9e-31 137.5 107 65.4
MBI17_g08336_MAGBIO Magnolia biondii HOM05D006639 ORTHO05D008339 1.2e-30 137.1 145 57.9
Sabra09G0127600 Salix brachista HOM05D006639 ORTHO05D008339 1.5e-30 136.7 115 65.2
PSO339G4282 Papaver somniferum HOM05D006639 ORTHO05D008339 2.0e-30 136.3 106 67.0
Haze_23370 Corylus avellana HOM05D006639 ORTHO05D008339 2.6e-30 136.0 95 71.6
Os09g0568200 Oryza sativa ssp. japonica HOM05D006639 ORTHO05D008339 2.6e-30 136.0 108 64.8
Sc12g0004540 Simmondsia chinensis HOM05D006639 ORTHO05D008339 3.4e-30 135.6 107 65.4
Cfa010012 Carpinus fangiana HOM05D006639 ORTHO05D008339 4.4e-30 135.2 95 71.6
QL01p012190 Quercus lobata HOM05D006639 ORTHO05D008339 5.8e-30 134.8 141 61.7
TWI31G0153 Tripterygium wilfordii HOM05D006639 ORTHO05D008339 2.2e-29 132.9 113 65.5
Zm00001eb308280 Zea mays HOM05D006639 ORTHO05D008339 2.9e-29 132.5 107 62.6
Aa31LG5G8810 Aethionema arabicum HOM05D006639 ORTHO05D008339 4.9e-29 131.7 144 52.8
ClCG02G022260 Citrullus lanatus HOM05D006639 ORTHO05D008339 4.9e-29 131.7 154 53.9
ATR0776G083 Amborella trichopoda HOM05D006639 ORTHO05D008339 6.4e-29 131.3 112 61.6
RcHm_v2.0_Chr5g0044741 Rosa chinensis HOM05D006639 ORTHO05D008339 1.1e-28 130.6 105 65.7
PSO384G2857 Papaver somniferum HOM05D006639 ORTHO05D008339 1.9e-28 129.8 133 56.4
CiPaw.14G099800 Carya illinoinensis HOM05D006639 ORTHO05D008339 2.4e-28 129.4 107 64.5
Aqoxy4G02766 Aquilegia oxysepala HOM05D006639 ORTHO05D008339 3.2e-28 129.0 145 53.8
AT2G27470 Arabidopsis thaliana HOM05D006639 ORTHO05D008339 3.2e-28 129.0 112 59.8
A07p18230 Brassica napus HOM05D006639 ORTHO05D008339 4.1e-28 128.6 151 58.3
CDE08G1389 Ceratophyllum demersum HOM05D006639 ORTHO05D008339 5.4e-28 128.3 144 50.0
Carub.0004s0810 Capsella rubella HOM05D006639 ORTHO05D008339 7.1e-28 127.9 112 58.9
BraA07t29539Z Brassica rapa HOM05D006639 ORTHO05D008339 2.1e-27 126.3 153 58.2
AL4G21460 Arabidopsis lyrata HOM05D006639 ORTHO05D008339 3.5e-27 125.6 112 58.0
BcaB02g10091 Brassica carinata HOM05D006639 ORTHO05D008339 3.5e-27 125.6 97 63.9
DCAR_006164 Daucus carota HOM05D006639 ORTHO05D008339 6.0e-27 124.8 92 72.8
Sp4g10260 Schrenkiella parvula HOM05D006639 ORTHO05D008339 6.0e-27 124.8 105 61.0
FAN11G3713 Fragaria x ananassa HOM05D006639 ORTHO05D008339 1.0e-26 124.0 99 67.7
BcaC02g10878 Brassica carinata HOM05D006639 ORTHO05D008339 1.3e-26 123.6 103 61.2
C04p24130 Brassica napus HOM05D006639 ORTHO05D008339 1.3e-26 123.6 103 61.2
BolC4t23910H Brassica oleracea HOM05D006639 ORTHO05D008339 1.3e-26 123.6 103 61.2
HPP92_003216 Vanilla planifolia HOM05D006639 ORTHO05D008339 1.3e-26 123.6 124 54.8
Prupe.6G130500 Prunus persica HOM05D006639 ORTHO05D008339 3.9e-26 122.1 156 53.2
Sed0014981 Sechium edule HOM05D006639 ORTHO05D008339 3.9e-26 122.1 91 69.2
CARHR120120 Cardamine hirsuta HOM05D006639 ORTHO05D008339 5.1e-26 121.7 112 57.1
MD11G1164600 Malus domestica HOM05D006639 ORTHO05D008339 7.3e-25 117.9 113 58.4
SEGI_32267 Sequoiadendron giganteum HOM05D006639 ORTHO05D008339 1.2e-24 117.1 105 57.1
BolC3t15529H Brassica oleracea HOM05D006639 ORTHO05D008339 1.6e-24 116.7 108 55.6
Atru.chr3.3238 Acer truncatum HOM05D006639 ORTHO05D008339 2.1e-24 116.3 86 68.6
Atru.BG.107.p Acer truncatum HOM05D006639 ORTHO05D008339 3.6e-24 115.5 85 68.2
Thhalv10017865m.g Eutrema salsugineum HOM05D006639 ORTHO05D008339 4.7e-24 115.2 96 62.5
BcaC01g04942 Brassica carinata HOM05D006639 ORTHO05D008339 1.4e-23 113.6 108 54.6
Mapoly0105s0006 Marchantia polymorpha HOM05D006639 ORTHO05D008339 8.9e-23 110.9 144 45.1
AagrBONN_evm.TU.Sc2ySwM_362.1778 Anthoceros agrestis HOM05D006639 ORTHO05D008339 2.6e-22 109.4 113 52.2
C03p31860 Brassica napus HOM05D006639 ORTHO05D008339 4.4e-22 108.6 152 44.1
BcaB01g03073 Brassica carinata HOM05D006639 ORTHO05D008339 5.8e-22 108.2 98 57.1
SMO340G0007 Selaginella moellendorffii HOM05D006639 ORTHO05D008339 7.6e-22 107.8 145 52.4
Pp3c26_8280 Physcomitrium patens HOM05D006639 ORTHO05D008339 1.1e-20 104.0 145 42.8
ECA238G0189 Erigeron canadensis HOM05D006639 ORTHO05D008339 8.7e-18 94.4 132 44.7
PRCOL_00006285 Prasinoderma coloniale HOM05D006639 ORTHO05D008339 1.1e-17 94.0 109 48.6
Cre07.g341800 Chlamydomonas reinhardtii HOM05D006639 ORTHO05D008339 9.6e-17 90.9 103 45.6
MCO15G204 Micromonas commoda HOM05D006639 ORTHO05D008339 2.0e-14 83.2 109 41.3
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 5.1e-10 68.6 43 81.4
COL.COLO4_19857 Corchorus olitorius HOM05D006639 ORTHO05D008339 1.6e-08 63.5 45 71.1
AUR62009752 Chenopodium quinoa HOM05D006639 ORTHO05D008339 1.4e-07 60.5 38 73.7
MD03G1183400 Malus domestica HOM05D000297 ORTHO05D000193 6.9e-07 58.2 104 33.7
MD11G1200400 Malus domestica HOM05D000297 ORTHO05D000193 1.5e-06 57.0 104 32.7
Ca_06394_v3 Cicer arietinum L. HOM05D000297 ORTHO05D000193 2.0e-06 56.6 104 33.7
FvH4_3g29360 Fragaria vesca HOM05D000297 ORTHO05D000193 2.0e-06 56.6 104 32.7
FAN11G1502 Fragaria x ananassa HOM05D000297 ORTHO05D000193 2.0e-06 56.6 104 32.7
FAN21G0154 Fragaria x ananassa HOM05D000297 ORTHO05D000193 2.0e-06 56.6 104 32.7
FAN25G0374 Fragaria x ananassa HOM05D000297 ORTHO05D000193 2.0e-06 56.6 104 32.7
Nn1g05220 Nelumbo nucifera HOM05D006639 ORTHO05D008339 2.0e-06 56.6 57 54.4
RcHm_v2.0_Chr5g0053731 Rosa chinensis HOM05D000297 ORTHO05D000193 2.0e-06 56.6 104 32.7
FAN16G1399 Fragaria x ananassa HOM05D000297 ORTHO05D000193 2.6e-06 56.2 104 31.7
Lsat_1_v5_gn_6_29620 Lactuca sativa HOM05D000297 ORTHO05D000193 2.6e-06 56.2 89 31.5
PGR004G1997 Punica granatum HOM05D000297 ORTHO05D000193 2.6e-06 56.2 103 34.0
Nn1g05039 Nelumbo nucifera HOM05D006639 ORTHO05D008339 4.5e-06 55.5 55 54.5
TWI38G0447 Tripterygium wilfordii HOM05D000297 ORTHO05D000193 4.5e-06 55.5 104 32.7
TWI39G0568 Tripterygium wilfordii HOM05D000297 ORTHO05D000193 4.5e-06 55.5 104 32.7
Prupe.4G242700 Prunus persica HOM05D000297 ORTHO05D000193 5.8e-06 55.1 103 32.0
Eucgr.L00153 Eucalyptus grandis HOM05D000297 ORTHO05D000193 7.6e-06 54.7 101 33.7
arahy.Tifrunner.gnm1.ann1.8XPX7R Arachis hypogaea HOM05D000297 ORTHO05D000193 9.9e-06 54.3 99 33.3
arahy.Tifrunner.gnm1.ann1.BTE5MM Arachis hypogaea HOM05D000297 ORTHO05D000193 9.9e-06 54.3 99 33.3
Lalb_Chr10g0107411 Lupinus albus HOM05D000297 ORTHO05D000193 9.9e-06 54.3 99 33.3
Manes.15G060400 Manihot esculenta HOM05D000297 ORTHO05D000193 9.9e-06 54.3 99 33.3
Potri.016G006100 Populus trichocarpa HOM05D000297 ORTHO05D000193 9.9e-06 54.3 98 33.7
Sabra16G0010900 Salix brachista HOM05D000297 ORTHO05D000193 9.9e-06 54.3 98 33.7


User provided reference genes

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