Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09846 Striga asiatica HOM05D000143 ORTHO05D400941 1.6e-64 249.2 122 100.0
SGA_v2.0_scaffold8G04531 Striga asiatica HOM05D000143 ORTHO05D000072 2.6e-22 109.0 121 51.2
SGA_v2.0_scaffold74G24535 Striga asiatica HOM05D000143 ORTHO05D401233 4.6e-11 71.6 95 46.3
FvH4_4g22110 Fragaria vesca HOM05D000143 ORTHO05D000072 3.1e-07 58.9 123 30.9
CiPaw.06G106500 Carya illinoinensis HOM05D000143 ORTHO05D000072 4.0e-07 58.5 171 28.7
HPP92_025287 Vanilla planifolia HOM05D000143 ORTHO05D000072 4.0e-07 58.5 144 27.8
CiPaw.05G105100 Carya illinoinensis HOM05D000143 ORTHO05D000072 5.3e-07 58.2 171 28.1
Eucgr.H04592 Eucalyptus grandis HOM05D000143 ORTHO05D000072 5.3e-07 58.2 172 27.3
Phvul.008G001100 Phaseolus vulgaris HOM05D000143 ORTHO05D000072 6.9e-07 57.8 171 28.1
BcaC09g49898 Brassica carinata HOM05D000143 ORTHO05D000072 9.0e-07 57.4 140 30.0
Eucgr.H04589 Eucalyptus grandis HOM05D000143 ORTHO05D000072 9.0e-07 57.4 172 27.3
Medtr5g067530 Medicago truncatula HOM05D000143 ORTHO05D000072 1.2e-06 57.0 69 40.6
MELO3C022341.2 Cucumis melo HOM05D000143 ORTHO05D000072 1.5e-06 56.6 161 26.1
CsaV3_6G007930 Cucumis sativus L. HOM05D000143 ORTHO05D000072 1.5e-06 56.6 161 26.1
PSO017G6838 Papaver somniferum HOM05D000143 ORTHO05D000072 1.5e-06 56.6 171 24.0
VMungo1383G2930 Vigna mungo HOM05D000143 ORTHO05D000072 1.5e-06 56.6 171 25.1
arahy.Tifrunner.gnm1.ann1.5TG8XZ Arachis hypogaea HOM05D000143 ORTHO05D000072 2.0e-06 56.2 173 27.7
DCAR_024643 Daucus carota HOM05D000143 ORTHO05D000072 2.0e-06 56.2 161 29.2
FAN12G1580 Fragaria x ananassa HOM05D000143 ORTHO05D000072 2.0e-06 56.2 123 30.1
MBI18_g12408_MAGBIO Magnolia biondii HOM05D000143 ORTHO05D000072 2.6e-06 55.8 143 28.7
PGSC0003DMG400004335 Solanum tuberosum HOM05D000143 ORTHO05D000072 4.5e-06 55.1 113 33.6
THA.LOC104825481 Tarenaya hassleriana HOM05D000143 ORTHO05D000072 4.5e-06 55.1 65 40.0
HPP92_000337 Vanilla planifolia HOM05D000143 ORTHO05D000072 4.5e-06 55.1 163 27.0
arahy.Tifrunner.gnm1.ann1.C2ZJE6 Arachis hypogaea HOM05D000143 ORTHO05D000072 5.8e-06 54.7 171 25.1
arahy.Tifrunner.gnm1.ann1.Y269WP Arachis hypogaea HOM05D000143 ORTHO05D000072 5.8e-06 54.7 171 25.1
Oeu011336.1 Olea europaea HOM05D000143 ORTHO05D000072 5.8e-06 54.7 163 26.4
CsaV3_1G000300 Cucumis sativus L. HOM05D000143 ORTHO05D000072 7.6e-06 54.3 81 37.0
Dinv18816 Davidia involucrata HOM05D000143 ORTHO05D000072 7.6e-06 54.3 161 27.3
Eucgr.K02183 Eucalyptus grandis HOM05D000143 ORTHO05D000072 7.6e-06 54.3 166 26.5
Lalb_Chr12g0208611 Lupinus albus HOM05D000143 ORTHO05D000072 7.6e-06 54.3 172 25.0
TAR371G1080 Trochodendron aralioides HOM05D000143 ORTHO05D000072 7.6e-06 54.3 67 38.8
Atru.chr11.2391 Acer truncatum HOM05D000143 ORTHO05D000072 1.0e-05 53.9 68 39.7
arahy.Tifrunner.gnm1.ann1.YD7UU4 Arachis hypogaea HOM05D000143 ORTHO05D000072 1.0e-05 53.9 171 25.1
BcaNung01171 Brassica carinata HOM05D000143 ORTHO05D000072 1.0e-05 53.9 65 38.5
Ciclev10032218m.g Citrus clementina HOM05D000143 ORTHO05D000072 1.0e-05 53.9 171 24.0
Lj4g0004256 Lotus japonicus HOM05D000143 ORTHO05D000072 1.0e-05 53.9 171 24.6
Medtr7g405730 Medicago truncatula HOM05D000143 ORTHO05D000072 1.0e-05 53.9 65 38.5
Nitab4.5_0004584g0010 Nicotiana tabacum HOM05D000143 ORTHO05D000072 1.0e-05 53.9 145 26.2
PSO832G2056 Papaver somniferum HOM05D000143 ORTHO05D000072 1.0e-05 53.9 171 24.6
RcHm_v2.0_Chr4g0429511 Rosa chinensis HOM05D000143 ORTHO05D000072 1.0e-05 53.9 171 25.7
VMungo1383G2307 Vigna mungo HOM05D000143 ORTHO05D000072 1.0e-05 53.9 109 33.9


User provided reference genes

Program Settings