Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09842 Striga asiatica HOM05D011572 ORTHO05D006517 8.6e-309 1062.8 516 100.0
SGA_v2.0_scaffold206G41802 Striga asiatica HOM05D011572 ORTHO05D006517 1.3e-235 819.7 497 83.3
SGA_v2.0_scaffold45G17094 Striga asiatica HOM05D011572 ORTHO05D006517 4.8e-235 817.8 538 78.3
SGA_v2.0_scaffold365G50016 Striga asiatica HOM05D011572 ORTHO05D006517 1.9e-183 646.4 360 87.2
SGA_v2.0_scaffold41G15869 Striga asiatica HOM05D011572 ORTHO05D006517 9.2e-170 600.9 320 89.4
SGA_v2.0_scaffold12G06313 Striga asiatica HOM05D011572 ORTHO05D006517 5.0e-131 472.2 307 77.2
SGA_v2.0_scaffold125G33657 Striga asiatica HOM05D011572 ORTHO05D010459 1.0e-67 261.9 161 85.7
SGA_v2.0_scaffold954G53748 Striga asiatica HOM05D011572 ORTHO05D010459 1.3e-67 261.5 204 72.1
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 1.9e-61 241.1 421 39.9
SGA_v2.0_scaffold365G50015 Striga asiatica HOM05D011572 ORTHO05D012893 3.5e-52 210.3 127 83.5
SGA_v2.0_scaffold9G04869 Striga asiatica HOM05D011572 ORTHO05D006517 1.5e-42 178.3 226 43.4
SGA_v2.0_scaffold502G52512 Striga asiatica HOM05D011572 ORTHO05D006517 2.7e-36 157.5 85 88.2
SGA_v2.0_scaffold2719G54189 Striga asiatica HOM05D011572 ORTHO05D010459 1.0e-30 139.0 92 78.3
Thecc.02G036800 Theobroma cacao HOM05D008181 ORTHO05D010459 7.1e-21 106.3 300 27.3
SalBow7G0014 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.6e-20 103.6 261 29.9
SalBow8G0214 Salvia bowleyana HOM05D031689 ORTHO05D006517 7.9e-20 102.8 416 26.9
SGA_v2.0_scaffold187G40267 Striga asiatica HOM05D011572 ORTHO05D006517 3.9e-19 100.5 121 43.0
Thecc.10G054600 Theobroma cacao HOM05D008181 ORTHO05D010459 1.1e-18 99.0 298 27.9
SalBow8G1323 Salvia bowleyana HOM05D008082 ORTHO05D006517 7.4e-18 96.3 260 28.1
SalBow2G3428 Salvia bowleyana HOM05D008082 ORTHO05D006517 9.7e-18 95.9 260 28.1
SalBow2G3580 Salvia bowleyana HOM05D008082 ORTHO05D006517 9.7e-18 95.9 260 28.1
Thecc.03G161900 Theobroma cacao HOM05D008181 ORTHO05D010459 6.3e-17 93.2 278 27.3
SalBow4G1611 Salvia bowleyana HOM05D009699 ORTHO05D006517 5.3e-16 90.1 253 26.5
SalBow1G3545 Salvia bowleyana HOM05D008082 ORTHO05D006517 6.9e-16 89.7 260 27.7
SalBow1G5862 Salvia bowleyana HOM05D008082 ORTHO05D006517 6.9e-16 89.7 260 27.7
Thecc.05G196700 Theobroma cacao HOM05D008181 ORTHO05D010459 6.9e-16 89.7 260 28.1
SalBow4G1541 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.4e-15 87.4 261 28.0
SalBow8G4995 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.2e-14 84.7 260 28.1
SalBow3G1743 Salvia bowleyana HOM05D000011 ORTHO05D006517 3.8e-14 84.0 249 26.9
SalBow2G0951 Salvia bowleyana HOM05D015320 ORTHO05D006517 5.0e-14 83.6 215 27.9
SalBow1G5422 Salvia bowleyana HOM05D010599 ORTHO05D006517 1.9e-13 81.6 256 24.6
SGA_v2.0_scaffold6G03233 Striga asiatica HOM05D001567 ORTHO05D001409 1.6e-12 78.6 37 83.8
SalBow3G1893 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.7e-12 77.8 226 27.0
SalBow8G1146 Salvia bowleyana HOM05D000011 ORTHO05D000018 2.7e-12 77.8 126 35.7
Thecc.01G399000 Theobroma cacao HOM05D008181 ORTHO05D010459 3.6e-12 77.4 215 27.0
SalBow1G6861 Salvia bowleyana HOM05D010599 ORTHO05D006517 6.1e-12 76.6 256 23.8
SalBow1G7517 Salvia bowleyana HOM05D010599 ORTHO05D006517 6.1e-12 76.6 164 28.0
SalBow2G1190 Salvia bowleyana HOM05D010599 ORTHO05D006517 6.1e-12 76.6 256 23.8
SalBow1G7044 Salvia bowleyana HOM05D009699 ORTHO05D006517 7.9e-12 76.3 264 25.0
Thecc.05G178300 Theobroma cacao HOM05D008181 ORTHO05D010459 7.9e-12 76.3 211 28.4
Thecc.02G255800 Theobroma cacao HOM05D008181 ORTHO05D010459 1.0e-11 75.9 174 27.6
SalBow6G2617 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.4e-11 75.5 203 29.6
Thecc.07G103000 Theobroma cacao HOM05D008181 ORTHO05D021025 1.4e-11 75.5 197 26.9
SalBow5G1923 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.9e-11 73.9 229 25.8
Thecc.02G178200 Theobroma cacao HOM05D008181 ORTHO05D021025 5.1e-11 73.6 164 29.3
SalBow6G3176 Salvia bowleyana HOM05D010599 ORTHO05D006517 6.7e-11 73.2 250 24.8
SalBow3G2968 Salvia bowleyana HOM05D031689 ORTHO05D006517 8.8e-11 72.8 140 33.6
Thecc.05G225100 Theobroma cacao HOM05D008181 ORTHO05D010459 1.1e-10 72.4 186 25.3
Thecc.06G088800 Theobroma cacao HOM05D008181 ORTHO05D010459 2.0e-10 71.6 225 25.8
Thecc.09G272400 Theobroma cacao HOM05D008181 ORTHO05D010459 2.0e-10 71.6 154 30.5
SalBow3G1903 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.3e-10 70.5 169 29.0
SalBow4G1733 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.3e-10 70.5 252 25.0
SalBow6G6558 Salvia bowleyana HOM05D010599 ORTHO05D006517 7.4e-10 69.7 136 31.6
Thecc.02G200300 Theobroma cacao HOM05D008181 ORTHO05D010459 7.4e-10 69.7 227 25.1
Thecc.10G115900 Theobroma cacao HOM05D008181 ORTHO05D010459 7.4e-10 69.7 202 25.2
Thecc.06G125800 Theobroma cacao HOM05D008181 ORTHO05D010459 2.2e-09 68.2 153 31.4
Thecc.09G213300 Theobroma cacao HOM05D008181 ORTHO05D010459 2.2e-09 68.2 239 23.4
SalBow3G2031 Salvia bowleyana HOM05D011572 ORTHO05D006517 2.8e-09 67.8 139 28.8
SalBow8G1284 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.8e-09 67.8 240 24.6
SalBow4G1236 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.8e-09 67.0 231 24.7
Thecc.04G033000 Theobroma cacao HOM05D008181 ORTHO05D010459 4.8e-09 67.0 157 29.3
SalBow8G4192 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.1e-08 65.9 247 23.9
SGA_v2.0_scaffold74G24697 Striga asiatica HOM05D011572 ORTHO05D006517 1.4e-08 65.5 64 53.1
SalBow1G5610 Salvia bowleyana HOM05D010599 ORTHO05D006517 1.8e-08 65.1 138 29.0
SalBow6G1465 Salvia bowleyana HOM05D009699 ORTHO05D006517 2.4e-08 64.7 208 25.5
Thecc.05G143600 Theobroma cacao HOM05D008181 ORTHO05D021025 2.4e-08 64.7 108 32.4
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 3.1e-08 64.3 226 27.4
SGA_v2.0_scaffold844G53665 Striga asiatica HOM05D213144 ORTHO05D006517 4.1e-08 63.9 35 77.1
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 6.9e-08 63.2 151 27.2
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-07 62.4 151 29.1
SalBow1G2008 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.2e-07 62.4 175 30.3
Thecc.02G184700 Theobroma cacao HOM05D008181 ORTHO05D021025 1.2e-07 62.4 131 26.7
SalBow2G1060 Salvia bowleyana HOM05D009699 ORTHO05D006517 1.5e-07 62.0 115 31.3
SalBow7G1548 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.5e-07 62.0 214 24.8
SalBow7G3634 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.5e-07 62.0 214 24.8
Thecc.02G219700 Theobroma cacao HOM05D008181 ORTHO05D021025 2.0e-07 61.6 158 25.3
Thecc.10G099400 Theobroma cacao HOM05D008181 ORTHO05D010459 2.0e-07 61.6 222 24.3
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 2.6e-07 61.2 213 24.9
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 5.9e-07 60.1 140 29.3
Thecc.06G009500 Theobroma cacao HOM05D008181 ORTHO05D010459 1.0e-06 59.3 109 31.2
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-06 58.5 153 27.5
CANSAT56G1475 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-06 58.5 136 29.4
CANSAT56G1868 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-06 58.5 226 27.4
SGA_v2.0_scaffold12G06007 Striga asiatica HOM05D011572 ORTHO05D006517 2.9e-06 57.8 48 56.2
SalBow5G3432 Salvia bowleyana HOM05D009699 ORTHO05D006517 3.8e-06 57.4 177 25.4
CANSAT21G1969 Cannabis sativa HOM05D008058 ORTHO05D010564 8.5e-06 56.2 136 27.9
Thecc.06G050300 Theobroma cacao HOM05D008181 ORTHO05D021025 8.5e-06 56.2 49 42.9


User provided reference genes

Program Settings