Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09835 Striga asiatica HOM05D005413 ORTHO05D006536 4.4e-89 331.3 168 100.0
MSTRG.12398 Avicennia marina HOM05D005413 ORTHO05D006536 8.8e-53 210.7 185 64.9
CSS0023574 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 2.9e-48 195.7 182 62.6
Hma1.2p1_0101F.1_g049660 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 6.1e-46 188.0 179 60.3
Lj2A950G18 Lonicera japonica HOM05D005413 ORTHO05D006536 1.0e-45 187.2 185 58.9
Migut.D02382 Erythranthe guttata HOM05D005413 ORTHO05D006536 2.3e-45 186.0 170 61.2
Dinv18856 Davidia involucrata HOM05D005413 ORTHO05D006536 3.3e-44 182.2 184 56.5
Actinidia37056 Actinidia chinensis HOM05D005413 ORTHO05D006536 9.7e-44 180.6 184 58.2
Ciclev10028962m.g Citrus clementina HOM05D005413 ORTHO05D006536 3.7e-43 178.7 186 55.4
QL01p019216 Quercus lobata HOM05D005413 ORTHO05D006536 1.1e-42 177.2 185 55.1
CiPaw.14G092700 Carya illinoinensis HOM05D005413 ORTHO05D006536 7.0e-42 174.5 186 57.5
Actinidia11676 Actinidia chinensis HOM05D005413 ORTHO05D006536 1.2e-41 173.7 184 56.5
Oeu031446.2 Olea europaea HOM05D005413 ORTHO05D006536 1.0e-40 170.6 182 54.4
unitig_899.g15382 Utricularia gibba HOM05D005413 ORTHO05D006536 1.0e-40 170.6 182 54.9
Peaxi162Scf00429g00512 Petunia axillaris HOM05D005413 ORTHO05D006536 1.7e-40 169.9 184 55.4
GSVIVG01037530001 Vitis vinifera HOM05D005413 ORTHO05D006536 2.2e-40 169.5 178 55.1
Duzib170G0305 Durio zibethinus HOM05D005413 ORTHO05D006536 3.8e-40 168.7 192 51.6
COL.COLO4_00160 Corchorus olitorius HOM05D005413 ORTHO05D006536 8.5e-40 167.5 192 53.1
RcHm_v2.0_Chr5g0049091 Rosa chinensis HOM05D005413 ORTHO05D006536 8.5e-40 167.5 184 53.8
Thecc.09G267600 Theobroma cacao HOM05D005413 ORTHO05D006536 2.5e-39 166.0 192 51.0
ECA238G0598 Erigeron canadensis HOM05D005413 ORTHO05D006536 4.2e-39 165.2 181 59.1
FvH4_3g26150 Fragaria vesca HOM05D005413 ORTHO05D006536 5.5e-39 164.9 184 53.3
FAN11G2501 Fragaria x ananassa HOM05D005413 ORTHO05D006536 5.5e-39 164.9 184 53.3
FAN16G0400 Fragaria x ananassa HOM05D005413 ORTHO05D006536 9.4e-39 164.1 184 52.7
FAN16G2334 Fragaria x ananassa HOM05D005413 ORTHO05D006536 9.4e-39 164.1 184 52.7
FAN25G1874 Fragaria x ananassa HOM05D005413 ORTHO05D006536 6.1e-38 161.4 184 52.2
Nitab4.5_0000158g0110 Nicotiana tabacum HOM05D005413 ORTHO05D006536 6.1e-38 161.4 200 50.5
TAR623G0045 Trochodendron aralioides HOM05D005413 ORTHO05D006536 1.4e-37 160.2 183 51.4
Nn2g14375 Nelumbo nucifera HOM05D005413 ORTHO05D006536 3.0e-37 159.1 181 52.5
Cc01_g07840 Coffea canephora HOM05D005413 ORTHO05D006536 8.8e-37 157.5 182 53.3
Duzib168G1403 Durio zibethinus HOM05D005413 ORTHO05D006536 8.8e-37 157.5 192 52.1
SalBow6G6902 Salvia bowleyana HOM05D005413 ORTHO05D006536 7.5e-36 154.5 161 57.8
vmacro14313 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 7.5e-36 154.5 239 44.4
PGSC0003DMG400002998 Solanum tuberosum HOM05D005413 ORTHO05D006536 1.3e-35 153.7 195 51.8
Gohir.D05G079900 Gossypium hirsutum HOM05D005413 ORTHO05D006536 1.7e-35 153.3 187 50.3
Gorai.009G081500 Gossypium raimondii HOM05D005413 ORTHO05D006536 1.7e-35 153.3 187 50.3
Nitab4.5_0008364g0010 Nicotiana tabacum HOM05D005413 ORTHO05D006536 1.7e-35 153.3 201 48.8
Gohir.A05G077100 Gossypium hirsutum HOM05D005413 ORTHO05D006536 2.2e-35 152.9 187 48.1
Medtr4g050330 Medicago truncatula HOM05D005413 ORTHO05D006536 6.3e-35 151.4 186 51.1
TWI79G1192 Tripterygium wilfordii HOM05D005413 ORTHO05D006536 1.1e-34 150.6 183 51.4
MBI15_g31416_MAGBIO Magnolia biondii HOM05D005413 ORTHO05D006536 1.4e-34 150.2 177 51.4
Eucgr.J00585 Eucalyptus grandis HOM05D005413 ORTHO05D006536 3.1e-34 149.1 180 51.7
HanXRQChr05g0137071 Helianthus annuus HOM05D005413 ORTHO05D006536 3.1e-34 149.1 194 52.1
Dinv04422 Davidia involucrata HOM05D005413 ORTHO05D006536 4.1e-34 148.7 180 48.9
Lalb_Chr19g0136161 Lupinus albus HOM05D005413 ORTHO05D006536 7.0e-34 147.9 172 54.7
Manes.11G103700 Manihot esculenta HOM05D005413 ORTHO05D006536 7.0e-34 147.9 186 50.5
TPR.G4599 Trifolium pratense HOM05D005413 ORTHO05D006536 7.0e-34 147.9 188 48.9
DCAR_018207 Daucus carota HOM05D005413 ORTHO05D006536 9.1e-34 147.5 186 49.5
DCAR_012252 Daucus carota HOM05D005413 ORTHO05D006536 1.6e-33 146.7 193 47.7
Thhalv10014324m.g Eutrema salsugineum HOM05D005413 ORTHO05D006536 2.0e-33 146.4 196 49.5
Ca_19483_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 4.5e-33 145.2 186 47.8
Sopen11g029620 Solanum pennellii HOM05D005413 ORTHO05D006536 7.7e-33 144.4 195 48.7
Atru.chr3.3078 Acer truncatum HOM05D005413 ORTHO05D006536 1.0e-32 144.1 183 48.6
Atru.chr3.3087 Acer truncatum HOM05D005413 ORTHO05D006536 1.0e-32 144.1 183 48.6
Solyc11g071950.3 Solanum lycopersicum HOM05D005413 ORTHO05D006536 2.9e-32 142.5 195 48.2
TAR633G2414 Trochodendron aralioides HOM05D005413 ORTHO05D006536 2.9e-32 142.5 179 49.2
arahy.Tifrunner.gnm1.ann1.C0JSMI Arachis hypogaea HOM05D005413 ORTHO05D006536 6.5e-32 141.4 186 47.3
arahy.Tifrunner.gnm1.ann1.K4CWT5 Arachis hypogaea HOM05D005413 ORTHO05D006536 6.5e-32 141.4 186 47.3
Potri.010G244600 Populus trichocarpa HOM05D005413 ORTHO05D006536 8.5e-32 141.0 185 48.1
Prupe.6G147200 Prunus persica HOM05D005413 ORTHO05D006536 1.9e-31 139.8 186 48.4
PGR119G0748 Punica granatum HOM05D005413 ORTHO05D006536 2.5e-31 139.4 187 46.0
VMungo1127G2102 Vigna mungo HOM05D005413 ORTHO05D006536 2.5e-31 139.4 181 49.2
Sabra10G0191100 Salix brachista HOM05D005413 ORTHO05D006536 4.2e-31 138.7 185 47.0
Rhsim01G0199900 Rhododendron simsii HOM05D005413 ORTHO05D006536 9.4e-31 137.5 284 36.6
CsaV3_6G038630 Cucumis sativus L. HOM05D005413 ORTHO05D006536 2.1e-30 136.3 179 48.0
ClCG02G022490 Citrullus lanatus HOM05D005413 ORTHO05D006536 2.7e-30 136.0 179 48.6
MELO3C014525.2 Cucumis melo HOM05D005413 ORTHO05D006536 2.7e-30 136.0 179 48.0
CSS0050484 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 4.7e-30 135.2 169 49.7
MD11G1174800 Malus domestica HOM05D005413 ORTHO05D006536 1.4e-29 133.7 184 45.1
Phvul.011G100200 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 1.8e-29 133.3 182 47.8
Hma1.2p1_0098F.1_g048260 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 2.3e-29 132.9 179 48.6
Sed0018758 Sechium edule HOM05D005413 ORTHO05D006536 2.3e-29 132.9 167 49.7
Potri.008G001700 Populus trichocarpa HOM05D005413 ORTHO05D006536 3.0e-29 132.5 185 44.3
Rhsim01G0199600 Rhododendron simsii HOM05D005413 ORTHO05D006536 6.8e-29 131.3 299 34.4
Glyma.12G095900 Glycine max HOM05D005413 ORTHO05D006536 1.5e-28 130.2 180 48.3
Lj3g0006130 Lotus japonicus HOM05D005413 ORTHO05D006536 1.5e-28 130.2 184 45.1
Psat7g200680 Pisum sativum HOM05D005413 ORTHO05D006536 2.6e-28 129.4 189 46.0
C03p12140 Brassica napus HOM05D005413 ORTHO05D006536 4.4e-28 128.6 180 45.0
Hund06812 Selenicereus undatus HOM05D005413 ORTHO05D006536 5.7e-28 128.3 181 46.4
MD03G1159500 Malus domestica HOM05D005413 ORTHO05D006536 7.5e-28 127.9 184 45.1
CDE04G1023 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 9.8e-28 127.5 211 39.8
Potri.008G015500 Populus trichocarpa HOM05D005413 ORTHO05D006536 9.8e-28 127.5 185 42.7
BcaC01g06609 Brassica carinata HOM05D005413 ORTHO05D006536 3.7e-27 125.6 180 44.4
BolC3t13687H Brassica oleracea HOM05D005413 ORTHO05D006536 3.7e-27 125.6 180 44.4
Dinv03807 Davidia involucrata HOM05D005413 ORTHO05D006536 6.3e-27 124.8 160 48.1
HPP92_015644 Vanilla planifolia HOM05D005413 ORTHO05D006536 6.3e-27 124.8 175 44.6
Os03g0274700 Oryza sativa ssp. japonica HOM05D005413 ORTHO05D006536 1.8e-26 123.2 193 44.0
BraA03t10367Z Brassica rapa HOM05D005413 ORTHO05D006536 2.4e-26 122.9 180 43.9
Lalb_Chr03g0028501 Lupinus albus HOM05D005413 ORTHO05D006536 2.4e-26 122.9 181 45.3
Sp6g23150 Schrenkiella parvula HOM05D005413 ORTHO05D006536 3.1e-26 122.5 191 44.0
Zm00001eb012330 Zea mays HOM05D005413 ORTHO05D006536 7.0e-26 121.3 186 43.0
A03p10550 Brassica napus HOM05D005413 ORTHO05D006536 9.1e-26 120.9 172 44.2
Rhsim03G0094100 Rhododendron simsii HOM05D005413 ORTHO05D006536 1.2e-25 120.6 113 57.5
Glyma.11G171773 Glycine max HOM05D005413 ORTHO05D006536 1.6e-25 120.2 195 43.1
Oeu033267.1 Olea europaea HOM05D005413 ORTHO05D006536 2.7e-25 119.4 175 44.6
ATR1120G017 Amborella trichopoda HOM05D005413 ORTHO05D006536 5.9e-25 118.2 182 42.9
CDE07G0886 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 1.0e-24 117.5 212 38.2
FAN21G0466 Fragaria x ananassa HOM05D005413 ORTHO05D006536 2.9e-24 115.9 184 42.9
Sabra08G0009400 Salix brachista HOM05D005413 ORTHO05D006536 5.0e-24 115.2 177 42.4
vmacro07276 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 5.0e-24 115.2 116 55.2
Lsat_1_v5_gn_2_106300 Lactuca sativa HOM05D005413 ORTHO05D006536 6.5e-24 114.8 185 43.2
PSO339G2181 Papaver somniferum HOM05D005413 ORTHO05D006536 1.1e-23 114.0 213 37.6
Sc09g0004800 Simmondsia chinensis HOM05D005413 ORTHO05D006536 1.1e-23 114.0 157 43.9
CARHR191490 Cardamine hirsuta HOM05D005413 ORTHO05D006536 1.5e-23 113.6 172 43.6
PSO384G0849 Papaver somniferum HOM05D005413 ORTHO05D006536 1.9e-23 113.2 219 37.4
arahy.Tifrunner.gnm1.ann1.0IPW5R Arachis hypogaea HOM05D005413 ORTHO05D006536 1.2e-22 110.5 172 43.0
TPR.G10267 Trifolium pratense HOM05D005413 ORTHO05D006536 2.1e-22 109.8 174 41.4
Aqoxy1G00612 Aquilegia oxysepala HOM05D005413 ORTHO05D006536 4.7e-22 108.6 188 38.8
arahy.Tifrunner.gnm1.ann1.BD57S3 Arachis hypogaea HOM05D005413 ORTHO05D006536 4.7e-22 108.6 172 42.4
QL04p048808 Quercus lobata HOM05D005413 ORTHO05D006536 6.1e-22 108.2 210 36.7
Thecc.10G119400 Theobroma cacao HOM05D005413 ORTHO05D006536 6.1e-22 108.2 180 41.1
Ah.03g136210 Amaranthus hybridus HOM05D005413 ORTHO05D006536 8.0e-22 107.8 177 40.7
Ca_10423_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 8.0e-22 107.8 177 39.5
Lj5g0017620 Lotus japonicus HOM05D005413 ORTHO05D006536 8.0e-22 107.8 171 41.5
SEGI_03865 Sequoiadendron giganteum HOM05D005413 ORTHO05D006536 1.4e-21 107.1 189 40.2
AUR62024117 Chenopodium quinoa HOM05D005413 ORTHO05D006536 1.8e-21 106.7 186 42.5
EL10Ac6g13493 Beta vulgaris HOM05D005413 ORTHO05D006536 2.3e-21 106.3 183 42.1
Cfa010502 Carpinus fangiana HOM05D005413 ORTHO05D006536 2.3e-21 106.3 179 39.7
AUR62005613 Chenopodium quinoa HOM05D005413 ORTHO05D006536 2.0e-20 103.2 98 58.2
Medtr1g090350 Medicago truncatula HOM05D005413 ORTHO05D006536 2.0e-20 103.2 183 38.3
Haze_03431 Corylus avellana HOM05D005413 ORTHO05D006536 7.5e-20 101.3 110 51.8
Oeu029208.1 Olea europaea HOM05D005413 ORTHO05D006536 2.2e-19 99.8 64 79.7
THA.LOC104815083 Tarenaya hassleriana HOM05D005413 ORTHO05D006536 3.7e-19 99.0 189 40.7
Phvul.007G136700 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 6.3e-19 98.2 171 40.4
Dinv33562 Davidia involucrata HOM05D005413 ORTHO05D006536 1.1e-18 97.4 79 63.3
Lalb_Chr21g0312751 Lupinus albus HOM05D005413 ORTHO05D006536 9.2e-18 94.4 151 39.7
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 1.3e-16 90.5 115 42.6
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 1.7e-16 90.1 160 39.4
BcaB01g04747 Brassica carinata HOM05D005413 ORTHO05D006536 8.6e-16 87.8 182 39.6
Aa31LG1G13390 Aethionema arabicum HOM05D005413 ORTHO05D006536 1.9e-15 86.7 104 47.1
AT5G22040 Arabidopsis thaliana HOM05D005413 ORTHO05D006536 7.3e-15 84.7 196 35.2
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 1.2e-14 84.0 101 47.5
Lj2C36T10 Lonicera japonica HOM05D005413 ORTHO05D006536 8.0e-14 81.3 179 35.2
Haze_03425 Corylus avellana HOM05D005413 ORTHO05D006536 1.8e-13 80.1 110 43.6
THA.LOC104810942 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 1.8e-13 80.1 66 59.1
Carub.0006s1968 Capsella rubella HOM05D005413 ORTHO05D006536 1.2e-12 77.4 199 35.2
Cpa.g.sc33.125 Carica papaya HOM05D005413 ORTHO05D006536 1.5e-12 77.0 61 62.3
BcaB05g22753 Brassica carinata HOM05D005413 ORTHO05D006536 2.6e-12 76.3 54 66.7
AL6G33000 Arabidopsis lyrata HOM05D005413 ORTHO05D006536 9.8e-12 74.3 196 33.7
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 2.4e-10 69.7 99 44.4
PGR044G1324 Punica granatum HOM05D003044 ORTHO05D001869 3.5e-09 65.9 69 50.7
BcaNung07133 Brassica carinata HOM05D005413 ORTHO05D006536 4.6e-09 65.5 119 39.5
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 6.2e-06 55.1 71 43.7


User provided reference genes

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