Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09828 Striga asiatica HOM05D005744 ORTHO05D007503 4.8e-224 780.8 379 100.0
MSTRG.13706 Avicennia marina HOM05D005744 ORTHO05D007503 1.9e-172 609.4 413 74.3
Migut.E00304 Erythranthe guttata HOM05D005744 ORTHO05D007503 4.3e-172 608.2 414 73.9
SalBow5G0293 Salvia bowleyana HOM05D005744 ORTHO05D007503 3.3e-156 555.4 424 67.7
Cc08_g16880 Coffea canephora HOM05D005744 ORTHO05D007503 9.9e-153 543.9 411 66.9
Oeu010732.1 Olea europaea HOM05D005744 ORTHO05D007503 2.2e-152 542.7 419 66.6
Lsat_1_v5_gn_4_80081 Lactuca sativa HOM05D005744 ORTHO05D007503 5.4e-151 538.1 409 66.3
HanXRQChr16g0498211 Helianthus annuus HOM05D005744 ORTHO05D007503 1.2e-150 537.0 412 66.5
CSS0041302 Camellia sinensis var. sinensis HOM05D005744 ORTHO05D007503 6.2e-147 524.6 415 63.6
ECA232G3603 Erigeron canadensis HOM05D005744 ORTHO05D007503 1.1e-146 523.9 417 63.1
COL.COLO4_28103 Corchorus olitorius HOM05D005744 ORTHO05D007503 1.4e-146 523.5 415 64.3
Peaxi162Scf00074g00136 Petunia axillaris HOM05D005744 ORTHO05D007503 4.0e-146 521.9 402 64.9
DCAR_021616 Daucus carota HOM05D005744 ORTHO05D007503 2.6e-145 519.2 432 61.8
Gorai.008G206000 Gossypium raimondii HOM05D005744 ORTHO05D007503 1.3e-144 516.9 412 64.3
Gohir.A12G189400 Gossypium hirsutum HOM05D005744 ORTHO05D007503 3.8e-144 515.4 412 63.6
Ciclev10020324m.g Citrus clementina HOM05D005744 ORTHO05D007503 8.4e-144 514.2 410 63.2
Gohir.D12G191700 Gossypium hirsutum HOM05D005744 ORTHO05D007503 1.1e-143 513.8 412 63.3
GSVIVG01008538001 Vitis vinifera HOM05D005744 ORTHO05D007503 2.4e-143 512.7 419 63.0
Nitab4.5_0002720g0090 Nicotiana tabacum HOM05D005744 ORTHO05D007503 7.1e-143 511.1 445 60.7
PGSC0003DMG400012114 Solanum tuberosum HOM05D005744 ORTHO05D007503 7.1e-143 511.1 416 63.2
Thecc.03G128600 Theobroma cacao HOM05D005744 ORTHO05D007503 3.5e-142 508.8 412 62.9
CiPaw.11G008100 Carya illinoinensis HOM05D005744 ORTHO05D007503 6.0e-142 508.1 414 63.3
QL10p003203 Quercus lobata HOM05D005744 ORTHO05D007503 1.7e-141 506.5 410 63.7
Solyc08g083260.3 Solanum lycopersicum HOM05D005744 ORTHO05D007503 2.3e-141 506.1 420 62.6
Sopen08g031450 Solanum pennellii HOM05D005744 ORTHO05D007503 2.3e-141 506.1 420 62.6
Manes.14G051500 Manihot esculenta HOM05D005744 ORTHO05D007503 6.6e-141 504.6 426 61.0
Rhsim08G0189700 Rhododendron simsii HOM05D005744 ORTHO05D007503 8.6e-141 504.2 407 64.6
RhsimUnG0231400 Rhododendron simsii HOM05D005744 ORTHO05D007503 1.5e-140 503.4 409 64.3
Cfa018827 Carpinus fangiana HOM05D005744 ORTHO05D007503 1.6e-139 500.0 416 62.0
Atru.chr9.1122 Acer truncatum HOM05D005744 ORTHO05D007503 2.1e-139 499.6 414 61.8
Nn3g16475 Nelumbo nucifera HOM05D005744 ORTHO05D007503 2.1e-139 499.6 409 61.4
ClCG06G017860 Citrullus lanatus HOM05D005744 ORTHO05D007503 4.0e-138 495.4 433 59.6
Potri.015G095400 Populus trichocarpa HOM05D005744 ORTHO05D007503 6.9e-138 494.6 408 62.0
Sabra15G0116400 Salix brachista HOM05D005744 ORTHO05D007503 4.4e-137 491.9 416 60.8
BraA03t14628Z Brassica rapa HOM05D005744 ORTHO05D007503 7.6e-137 491.1 415 60.5
Actinidia25578 Actinidia chinensis HOM05D005744 ORTHO05D007503 1.3e-136 490.3 377 66.3
C07p53850 Brassica napus HOM05D005744 ORTHO05D007503 1.1e-135 487.3 415 60.0
BolC7t45875H Brassica oleracea HOM05D005744 ORTHO05D007503 2.4e-135 486.1 415 60.0
Sed0005313 Sechium edule HOM05D005744 ORTHO05D007503 2.4e-135 486.1 414 60.1
Psat5g140680 Pisum sativum HOM05D005744 ORTHO05D007503 3.2e-135 485.7 403 60.5
Carub.0007s1619 Capsella rubella HOM05D005744 ORTHO05D007503 5.4e-135 485.0 403 59.8
BcaC06g32852 Brassica carinata HOM05D005744 ORTHO05D007503 9.3e-135 484.2 415 59.8
MELO3C026209.2 Cucumis melo HOM05D005744 ORTHO05D007503 9.3e-135 484.2 433 58.4
Sp7g22860 Schrenkiella parvula HOM05D005744 ORTHO05D007503 1.2e-134 483.8 415 58.8
vmacro19203 Vaccinium macrocarpon HOM05D005744 ORTHO05D007503 1.6e-134 483.4 463 56.8
A03p55610 Brassica napus HOM05D005744 ORTHO05D007503 3.5e-134 482.3 415 59.8
CARHR232280 Cardamine hirsuta HOM05D005744 ORTHO05D007503 7.8e-134 481.1 403 59.6
CsaV3_1G000590 Cucumis sativus L. HOM05D005744 ORTHO05D007503 7.8e-134 481.1 419 58.9
Prupe.5G151700 Prunus persica HOM05D005744 ORTHO05D007503 7.8e-134 481.1 421 60.1
THA.LOC104825016 Tarenaya hassleriana HOM05D005744 ORTHO05D007503 7.8e-134 481.1 409 60.9
Aqoxy3G01542 Aquilegia oxysepala HOM05D005744 ORTHO05D007503 1.0e-133 480.7 402 59.0
Lj1g0015277 Lotus japonicus HOM05D005744 ORTHO05D007503 1.3e-133 480.3 409 61.1
Thhalv10025348m.g Eutrema salsugineum HOM05D005744 ORTHO05D007503 1.7e-133 479.9 403 58.8
arahy.Tifrunner.gnm1.ann1.DQ5P63 Arachis hypogaea HOM05D005744 ORTHO05D007503 6.6e-133 478.0 409 60.9
PGR044G2189 Punica granatum HOM05D005744 ORTHO05D007503 1.1e-132 477.2 382 63.6
AL7G28320 Arabidopsis lyrata HOM05D005744 ORTHO05D007503 1.5e-132 476.9 401 59.1
Lalb_Chr08g0237111 Lupinus albus HOM05D005744 ORTHO05D007503 1.5e-132 476.9 409 59.9
EL10As4g23384 Beta vulgaris HOM05D005744 ORTHO05D007503 2.5e-132 476.1 414 59.7
SalBow5G5674 Salvia bowleyana HOM05D005744 ORTHO05D007503 5.6e-132 474.9 403 62.8
Medtr3g074980 Medicago truncatula HOM05D005744 ORTHO05D007503 7.3e-132 474.6 405 60.2
CANSAT80G0573 Cannabis sativa HOM05D005744 ORTHO05D007503 9.6e-132 474.2 414 58.9
arahy.Tifrunner.gnm1.ann1.SJIN4P Arachis hypogaea HOM05D005744 ORTHO05D007503 1.3e-131 473.8 413 60.3
Ca_24503_v3 Cicer arietinum L. HOM05D005744 ORTHO05D007503 1.6e-131 473.4 410 59.3
CAN.G567.98 Capsicum annuum HOM05D005744 ORTHO05D007503 2.1e-131 473.0 439 58.8
MD14G1157700 Malus domestica HOM05D005744 ORTHO05D007503 2.8e-131 472.6 412 60.2
TPR.G12158 Trifolium pratense HOM05D005744 ORTHO05D007503 6.9e-130 468.0 401 61.1
Actinidia33099 Actinidia chinensis HOM05D005744 ORTHO05D007503 2.2e-128 463.0 348 66.1
CDE05G2332 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 1.1e-127 460.7 402 57.2
TPR.G26152 Trifolium pratense HOM05D005744 ORTHO05D007503 1.9e-127 459.9 404 59.4
Haze_07221 Corylus avellana HOM05D005744 ORTHO05D007503 3.2e-127 459.1 476 53.2
Eucgr.K02730 Eucalyptus grandis HOM05D005744 ORTHO05D007503 5.4e-127 458.4 435 56.8
PSO782G2798 Papaver somniferum HOM05D005744 ORTHO05D007503 2.7e-126 456.1 417 56.1
Duzib205G1133 Durio zibethinus HOM05D005744 ORTHO05D007503 5.1e-125 451.8 413 58.1
PSO801G0019 Papaver somniferum HOM05D005744 ORTHO05D007503 8.7e-125 451.1 413 56.2
PSO339G3552 Papaver somniferum HOM05D005744 ORTHO05D007503 1.5e-124 450.3 417 55.9
Dinv11169 Davidia involucrata HOM05D005744 ORTHO05D007503 1.9e-124 449.9 411 58.2
VMungo1309G1043 Vigna mungo HOM05D005744 ORTHO05D007503 5.6e-124 448.4 420 56.7
Glyma.06G170500 Glycine max HOM05D005744 ORTHO05D007503 1.3e-123 447.2 409 58.2
Lj9A478G92 Lonicera japonica HOM05D005744 ORTHO05D007503 3.7e-123 445.7 399 60.2
Phvul.009G166600 Phaseolus vulgaris HOM05D005744 ORTHO05D007503 6.2e-123 444.9 424 55.4
Ah.02g114920 Amaranthus hybridus HOM05D005744 ORTHO05D007503 5.3e-122 441.8 442 54.1
RcHm_v2.0_Chr7g0190291 Rosa chinensis HOM05D005744 ORTHO05D007503 5.3e-122 441.8 410 58.3
HPP92_020223 Vanilla planifolia HOM05D005744 ORTHO05D007503 6.9e-122 441.4 413 55.4
MBI07_g31012_MAGBIO Magnolia biondii HOM05D005744 ORTHO05D007503 4.5e-121 438.7 413 56.9
FAN18G3767 Fragaria x ananassa HOM05D005744 ORTHO05D007503 5.8e-121 438.3 411 58.2
ATR0561G060 Amborella trichopoda HOM05D005744 ORTHO05D007503 1.7e-120 436.8 416 55.3
unitig_27.g25288 Utricularia gibba HOM05D005744 ORTHO05D007503 3.8e-120 435.6 383 59.8
AUR62029618 Chenopodium quinoa HOM05D005744 ORTHO05D007503 6.4e-120 434.9 391 58.6
AUR62025939 Chenopodium quinoa HOM05D005744 ORTHO05D007503 2.4e-119 433.0 393 57.8
FvH4_5g08230 Fragaria vesca HOM05D005744 ORTHO05D007503 4.2e-119 432.2 411 57.7
Os01g0101300 Oryza sativa ssp. japonica HOM05D005744 ORTHO05D007503 2.1e-118 429.9 410 54.6
FAN08G2910 Fragaria x ananassa HOM05D005744 ORTHO05D007503 1.3e-117 427.2 412 57.0
TAR629G2476 Trochodendron aralioides HOM05D005744 ORTHO05D007503 1.3e-117 427.2 322 65.5
FAN13G0489 Fragaria x ananassa HOM05D005744 ORTHO05D007503 1.5e-116 423.7 451 53.2
Cpa.g.sc2981.2 Carica papaya HOM05D005744 ORTHO05D007503 9.3e-111 404.4 310 65.8
AT4G24880 Arabidopsis thaliana HOM05D005744 ORTHO05D007503 1.8e-109 400.2 319 61.4
RcHm_v2.0_Chr4g0409241 Rosa chinensis HOM05D005744 ORTHO05D007503 1.7e-104 383.6 412 51.9
Sc04g0000680 Simmondsia chinensis HOM05D005744 ORTHO05D007503 3.8e-104 382.5 269 66.9
Zm00001eb354570 Zea mays HOM05D005744 ORTHO05D007503 4.6e-102 375.6 413 49.6
FvH4_4g11820 Fragaria vesca HOM05D005744 ORTHO05D007503 2.5e-100 369.8 390 52.3
Mapoly0024s0037 Marchantia polymorpha HOM05D005744 ORTHO05D007503 9.7e-100 367.9 432 46.5
TAR633G0019 Trochodendron aralioides HOM05D005744 ORTHO05D007503 1.3e-99 367.5 307 59.3
Glyma.04G195500 Glycine max HOM05D005744 ORTHO05D007503 2.2e-99 366.7 309 59.5
PSO478G2520 Papaver somniferum HOM05D005744 ORTHO05D007503 2.2e-99 366.7 318 57.9
Aa31LG7G10960 Aethionema arabicum HOM05D005744 ORTHO05D007503 1.4e-98 364.0 277 62.8
Pp3c8_11540 Physcomitrium patens HOM05D005744 ORTHO05D007503 1.6e-94 350.5 431 45.5
SMO364G0648 Selaginella moellendorffii HOM05D005744 ORTHO05D007503 6.1e-94 348.6 395 46.3
FAN07G2643 Fragaria x ananassa HOM05D005744 ORTHO05D007503 7.4e-92 341.7 322 55.3
Nitab4.5_0000479g0030 Nicotiana tabacum HOM05D005744 ORTHO05D007503 1.2e-86 324.3 278 62.2
FAN12G3536 Fragaria x ananassa HOM05D005744 ORTHO05D007503 8.2e-83 311.6 306 55.2
SEGI_05259 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 2.1e-78 297.0 316 48.4
FAN12G3591 Fragaria x ananassa HOM05D005744 ORTHO05D007503 5.7e-76 288.9 289 54.3
Eucgr.L02977 Eucalyptus grandis HOM05D005744 ORTHO05D007503 4.1e-66 256.1 275 52.0
SEGI_21905 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 1.8e-61 240.7 160 63.8
MCO07G390 Micromonas commoda HOM05D005744 ORTHO05D007503 2.7e-57 226.9 462 34.2
AagrBONN_evm.TU.Sc2ySwM_344.2997 Anthoceros agrestis HOM05D005744 ORTHO05D007503 3.3e-55 219.9 216 48.6
SHI06365 Sapria himalayana HOM05D005744 ORTHO05D007503 2.0e-49 200.7 374 35.6
RcHm_v2.0_Chr4g0407951 Rosa chinensis HOM05D005744 ORTHO05D007503 2.8e-46 190.3 217 51.2
HanXRQChr10g0289761 Helianthus annuus HOM05D005744 ORTHO05D007503 2.0e-44 184.1 193 51.8
Cre16.g666000 Chlamydomonas reinhardtii HOM05D005744 ORTHO05D007503 9.8e-44 181.8 555 28.3
PRCOL_00001155 Prasinoderma coloniale HOM05D005744 ORTHO05D007503 1.2e-41 174.9 417 32.4
COL.COLO4_31215 Corchorus olitorius HOM05D005744 ORTHO05D007503 3.6e-30 136.7 119 58.8
Lsat_1_v5_gn_8_77640 Lactuca sativa HOM05D005744 ORTHO05D007503 1.2e-28 131.7 124 55.6
Aa31LG7G10970 Aethionema arabicum HOM05D005744 ORTHO05D007503 3.4e-28 130.2 121 58.7
QL10p003231 Quercus lobata HOM05D005744 ORTHO05D007503 3.5e-25 120.2 108 57.4
GSVIVG01008540001 Vitis vinifera HOM05D005744 ORTHO05D007503 7.8e-25 119.0 118 57.6
Lsat_1_v5_gn_8_150141 Lactuca sativa HOM05D005744 ORTHO05D048266 4.3e-23 113.2 94 57.4
RcHm_v2.0_Chr4g0407901 Rosa chinensis HOM05D005744 ORTHO05D007503 9.3e-18 95.5 176 36.9
CDE12G0192 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 1.1e-15 88.6 118 45.8
TAR629G1577 Trochodendron aralioides HOM05D005744 ORTHO05D007503 3.2e-10 70.5 59 61.0
CDE05G3540 Ceratophyllum demersum HOM05D005744 ORTHO05D130478 1.8e-08 64.7 123 37.4
HanXRQChr10g0289791 Helianthus annuus HOM05D005744 ORTHO05D048266 5.6e-07 59.7 39 64.1


User provided reference genes

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