Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09809 Striga asiatica HOM05D000083 ORTHO05D001732 3.3e-53 211.5 109 100.0
SGA_v2.0_scaffold28G12027 Striga asiatica HOM05D000083 ORTHO05D001732 3.0e-38 161.8 84 94.0
SGA_v2.0_scaffold386G50501 Striga asiatica HOM05D000083 ORTHO05D001732 5.2e-38 161.0 81 97.5
MSTRG.22427 Avicennia marina HOM05D000083 ORTHO05D001732 3.8e-17 91.7 90 51.1
SalBow6G1611 Salvia bowleyana HOM05D000083 ORTHO05D001732 6.6e-17 90.9 85 55.3
SalBow6G3900 Salvia bowleyana HOM05D000083 ORTHO05D001732 6.6e-17 90.9 85 55.3
SalBow7G2654 Salvia bowleyana HOM05D000083 ORTHO05D001732 1.1e-11 73.6 93 43.0
SGA_v2.0_scaffold118G32435 Striga asiatica HOM05D000083 ORTHO05D001732 1.1e-11 73.6 103 46.6
Oeu032963.3 Olea europaea HOM05D000083 ORTHO05D001732 9.2e-11 70.5 94 43.6
Oeu043788.2 Olea europaea HOM05D000083 ORTHO05D001732 1.6e-10 69.7 84 44.0
TWI59G0759 Tripterygium wilfordii HOM05D000083 ORTHO05D001732 1.7e-09 66.2 79 46.8
MSTRG.1484 Avicennia marina HOM05D000083 ORTHO05D001732 2.3e-09 65.9 90 46.7
Migut.C01188 Erythranthe guttata HOM05D000083 ORTHO05D001732 5.0e-09 64.7 50 62.0
SGA_v2.0_scaffold24G10501 Striga asiatica HOM05D000137 ORTHO05D001732 5.0e-09 64.7 80 43.8
Rhsim11G0132200 Rhododendron simsii HOM05D000083 ORTHO05D001732 8.6e-09 63.9 94 43.6
CSS0046727 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D001732 1.5e-08 63.2 86 44.2
HanXRQChr10g0290471 Helianthus annuus HOM05D000083 ORTHO05D001732 1.5e-08 63.2 77 41.6
MBI06_g01051_MAGBIO Magnolia biondii HOM05D000083 ORTHO05D001732 1.9e-08 62.8 98 41.8
HanXRQChr11g0337401 Helianthus annuus HOM05D000083 ORTHO05D001732 9.5e-08 60.5 90 38.9
Sabra05G0129700 Salix brachista HOM05D000083 ORTHO05D001732 9.5e-08 60.5 78 42.3
vmacro01789 Vaccinium macrocarpon HOM05D000083 ORTHO05D001732 1.2e-07 60.1 87 42.5
vmacro00797 Vaccinium macrocarpon HOM05D000083 ORTHO05D001732 1.6e-07 59.7 79 44.3
MD15G1419300 Malus domestica HOM05D000083 ORTHO05D001732 2.8e-07 58.9 82 39.0
CANSAT25G3599 Cannabis sativa HOM05D000083 ORTHO05D001732 3.6e-07 58.5 78 43.6
DCAR_014286 Daucus carota HOM05D000083 ORTHO05D001732 3.6e-07 58.5 81 46.9
Rhsim11G0065600 Rhododendron simsii HOM05D000083 ORTHO05D001732 6.2e-07 57.8 94 40.4
Thecc.08G117200 Theobroma cacao HOM05D000083 ORTHO05D001732 6.2e-07 57.8 79 40.5
CSS0017611 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D001732 8.0e-07 57.4 86 40.7
Potri.005G172200 Populus trichocarpa HOM05D000083 ORTHO05D001732 8.0e-07 57.4 83 42.2
Haze_00521 Corylus avellana HOM05D000083 ORTHO05D001732 1.1e-06 57.0 77 45.5
MBI03_g11142_MAGBIO Magnolia biondii HOM05D000083 ORTHO05D001732 1.1e-06 57.0 98 37.8
Peaxi162Scf00011g00029 Petunia axillaris HOM05D000083 ORTHO05D001732 1.1e-06 57.0 92 41.3
CSS0002840 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D001732 3.1e-06 55.5 79 40.5
CSS0049481 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D001732 3.1e-06 55.5 79 40.5
Cfa015961 Carpinus fangiana HOM05D000083 ORTHO05D001732 3.1e-06 55.5 75 44.0
CiPaw.06G149200 Carya illinoinensis HOM05D000083 ORTHO05D001732 3.1e-06 55.5 88 36.4
TAR376G0100 Trochodendron aralioides HOM05D000083 ORTHO05D001732 3.1e-06 55.5 84 40.5
EL10Ac1g00035 Beta vulgaris HOM05D000083 ORTHO05D001732 4.0e-06 55.1 85 38.8
Gorai.009G242600 Gossypium raimondii HOM05D000083 ORTHO05D001732 4.0e-06 55.1 79 39.2
TAR624G1272 Trochodendron aralioides HOM05D000083 ORTHO05D001732 4.0e-06 55.1 87 34.5
TAR628G1287 Trochodendron aralioides HOM05D000083 ORTHO05D001732 4.0e-06 55.1 86 36.0
Actinidia03498 Actinidia chinensis HOM05D000083 ORTHO05D001732 5.2e-06 54.7 78 38.5
Dinv27381 Davidia involucrata HOM05D000083 ORTHO05D001732 5.2e-06 54.7 82 39.0
Gohir.D02G081800 Gossypium hirsutum HOM05D000083 ORTHO05D001732 5.2e-06 54.7 80 40.0
MD08G1227000 Malus domestica HOM05D000083 ORTHO05D001732 5.2e-06 54.7 78 37.2
Manes.02G158900 Manihot esculenta HOM05D000083 ORTHO05D001732 5.2e-06 54.7 78 42.3
RcHm_v2.0_Chr7g0240941 Rosa chinensis HOM05D000083 ORTHO05D001732 5.2e-06 54.7 79 40.5
Cc00_g07840 Coffea canephora HOM05D000083 ORTHO05D001732 8.9e-06 53.9 73 45.2
ECA240G4029 Erigeron canadensis HOM05D000083 ORTHO05D001732 8.9e-06 53.9 93 39.8
FAN18G1008 Fragaria x ananassa HOM05D000083 ORTHO05D001732 8.9e-06 53.9 82 39.0


User provided reference genes

Program Settings