Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09805 Striga asiatica HOM05D002889 ORTHO05D028411 9.5e-95 350.1 173 100.0
SGA_v2.0_scaffold88G27298 Striga asiatica HOM05D002889 ORTHO05D028411 1.9e-66 256.1 136 95.6
SGA_v2.0_scaffold42G16158 Striga asiatica HOM05D002889 ORTHO05D003366 6.5e-19 98.2 147 46.9
SGA_v2.0_scaffold3G01589 Striga asiatica HOM05D002889 ORTHO05D003366 4.2e-18 95.5 132 48.5
Duzib133G1137 Durio zibethinus HOM05D002889 ORTHO05D003366 1.4e-16 90.5 80 60.0
AUR62008857 Chenopodium quinoa HOM05D002889 ORTHO05D003366 4.0e-16 89.0 131 44.3
AUR62025387 Chenopodium quinoa HOM05D002889 ORTHO05D003366 4.0e-16 89.0 131 44.3
Hund18347 Selenicereus undatus HOM05D002889 ORTHO05D003366 8.8e-16 87.8 144 41.7
unitig_746.g26747 Utricularia gibba HOM05D002889 ORTHO05D003366 8.8e-16 87.8 53 81.1
Actinidia37570 Actinidia chinensis HOM05D002889 ORTHO05D003366 1.2e-15 87.4 130 45.4
Ah.08g213900 Amaranthus hybridus HOM05D002889 ORTHO05D003366 1.2e-15 87.4 132 42.4
unitig_899.g15235 Utricularia gibba HOM05D002889 ORTHO05D003366 2.0e-15 86.7 54 77.8
Gohir.A07G202300 Gossypium hirsutum HOM05D002889 ORTHO05D003366 2.6e-15 86.3 53 79.2
Gohir.D07G208500 Gossypium hirsutum HOM05D002889 ORTHO05D003366 2.6e-15 86.3 53 79.2
Gorai.001G235400 Gossypium raimondii HOM05D002889 ORTHO05D003366 2.6e-15 86.3 53 79.2
Rhsim13G0041900 Rhododendron simsii HOM05D002889 ORTHO05D003366 2.6e-15 86.3 53 79.2
Sabra02G0192400 Salix brachista HOM05D002889 ORTHO05D003366 2.6e-15 86.3 53 81.1
Thecc.01G236600 Theobroma cacao HOM05D002889 ORTHO05D003366 2.6e-15 86.3 53 79.2
TWI14G1217 Tripterygium wilfordii HOM05D002889 ORTHO05D003366 2.6e-15 86.3 53 79.2
vmacro02730 Vaccinium macrocarpon HOM05D002889 ORTHO05D003366 2.6e-15 86.3 53 79.2
arahy.Tifrunner.gnm1.ann1.EIAU9G Arachis hypogaea HOM05D002889 ORTHO05D003366 3.4e-15 85.9 62 72.6
EL10Ac7g17762 Beta vulgaris HOM05D002889 ORTHO05D003366 3.4e-15 85.9 130 42.3
Eucgr.K03590 Eucalyptus grandis HOM05D002889 ORTHO05D003366 3.4e-15 85.9 53 77.4
Gohir.A08G192800 Gossypium hirsutum HOM05D002889 ORTHO05D003366 3.4e-15 85.9 53 79.2
Gohir.D08G210800 Gossypium hirsutum HOM05D002889 ORTHO05D003366 3.4e-15 85.9 53 79.2
Gorai.004G223500 Gossypium raimondii HOM05D002889 ORTHO05D003366 3.4e-15 85.9 53 79.2
RcHm_v2.0_Chr6g0285551 Rosa chinensis HOM05D002889 ORTHO05D003366 4.4e-15 85.5 53 77.4
MSTRG.17535 Avicennia marina HOM05D002889 ORTHO05D003366 5.7e-15 85.1 53 79.2
CSS0022688 Camellia sinensis var. sinensis HOM05D002889 ORTHO05D003366 5.7e-15 85.1 130 44.6
Gohir.D07G160200 Gossypium hirsutum HOM05D002889 ORTHO05D003366 5.7e-15 85.1 67 68.7
Gorai.001G183300 Gossypium raimondii HOM05D002889 ORTHO05D003366 5.7e-15 85.1 53 79.2
Potri.002G253200 Populus trichocarpa HOM05D002889 ORTHO05D003366 5.7e-15 85.1 53 79.2
PGR044G2403 Punica granatum HOM05D002889 ORTHO05D003366 5.7e-15 85.1 55 74.5
SGA_v2.0_scaffold1G00677 Striga asiatica HOM05D002889 ORTHO05D003366 5.7e-15 85.1 53 77.4
THA.LOC104820061 Tarenaya hassleriana HOM05D002889 ORTHO05D003366 5.7e-15 85.1 130 43.8
Cc01_g17450 Coffea canephora HOM05D002889 ORTHO05D003366 7.5e-15 84.7 53 77.4
Lsat_1_v5_gn_8_90261 Lactuca sativa HOM05D002889 ORTHO05D003366 7.5e-15 84.7 130 44.6
Lalb_Chr20g0113361 Lupinus albus HOM05D002889 ORTHO05D003366 7.5e-15 84.7 62 71.0
MD05G1182800 Malus domestica HOM05D002889 ORTHO05D003366 7.5e-15 84.7 53 77.4
MD10G1170900 Malus domestica HOM05D002889 ORTHO05D003366 7.5e-15 84.7 53 77.4
Hund05497 Selenicereus undatus HOM05D002889 ORTHO05D003366 7.5e-15 84.7 53 77.4
GSVIVG01028491001 Vitis vinifera HOM05D002889 ORTHO05D003366 7.5e-15 84.7 53 77.4
arahy.Tifrunner.gnm1.ann1.PFSA3S Arachis hypogaea HOM05D002889 ORTHO05D003366 9.8e-15 84.3 62 71.0
DCAR_012623 Daucus carota HOM05D002889 ORTHO05D003366 9.8e-15 84.3 67 62.7
DCAR_018539 Daucus carota HOM05D002889 ORTHO05D003366 9.8e-15 84.3 67 62.7
Migut.N02247 Erythranthe guttata HOM05D002889 ORTHO05D003366 9.8e-15 84.3 53 77.4
FvH4_2g19850 Fragaria vesca HOM05D002889 ORTHO05D003366 9.8e-15 84.3 53 75.5
FAN15G1177 Fragaria x ananassa HOM05D002889 ORTHO05D003366 9.8e-15 84.3 53 75.5
FAN24G0698 Fragaria x ananassa HOM05D002889 ORTHO05D003366 9.8e-15 84.3 53 75.5
FAN27G1075 Fragaria x ananassa HOM05D002889 ORTHO05D003366 9.8e-15 84.3 53 75.5
Lj1A81G48 Lonicera japonica HOM05D002889 ORTHO05D003366 9.8e-15 84.3 53 77.4
Rhsim01G0258400 Rhododendron simsii HOM05D002889 ORTHO05D003366 9.8e-15 84.3 53 77.4
Cpa.g.sc8.204 Carica papaya HOM05D002889 ORTHO05D003366 1.3e-14 84.0 53 75.5
Dinv43034 Davidia involucrata HOM05D002889 ORTHO05D003366 1.3e-14 84.0 53 75.5
ECA236G1707 Erigeron canadensis HOM05D002889 ORTHO05D003366 1.3e-14 84.0 130 43.8
Lalb_Chr25g0289711 Lupinus albus HOM05D002889 ORTHO05D003366 1.3e-14 84.0 62 71.0
Psat3g050160 Pisum sativum HOM05D002889 ORTHO05D003366 1.3e-14 84.0 53 77.4
Prupe.8G209400 Prunus persica HOM05D002889 ORTHO05D003366 1.3e-14 84.0 53 75.5
SalBow6G0687 Salvia bowleyana HOM05D002889 ORTHO05D003366 1.3e-14 84.0 53 75.5
MSTRG.12505 Avicennia marina HOM05D002889 ORTHO05D003366 1.7e-14 83.6 53 75.5
CiPaw.03G153400 Carya illinoinensis HOM05D002889 ORTHO05D003366 1.7e-14 83.6 53 75.5
CiPaw.04G108600 Carya illinoinensis HOM05D002889 ORTHO05D003366 1.7e-14 83.6 53 75.5
Glyma.19G171200 Glycine max HOM05D002889 ORTHO05D003366 1.7e-14 83.6 62 69.4
TWI23G0798 Tripterygium wilfordii HOM05D002889 ORTHO05D003366 1.7e-14 83.6 53 75.5
VMungo1383G1051 Vigna mungo HOM05D002889 ORTHO05D003366 1.7e-14 83.6 62 69.4
Cfa002518 Carpinus fangiana HOM05D002889 ORTHO05D003366 2.2e-14 83.2 53 75.5
Haze_24745 Corylus avellana HOM05D002889 ORTHO05D003366 2.2e-14 83.2 53 75.5
Dinv19241 Davidia involucrata HOM05D002889 ORTHO05D003366 2.2e-14 83.2 53 75.5
Lj1g0020070 Lotus japonicus HOM05D002889 ORTHO05D003366 2.2e-14 83.2 53 77.4
Manes.13G042800 Manihot esculenta HOM05D002889 ORTHO05D003366 2.2e-14 83.2 53 75.5
QL09p043970 Quercus lobata HOM05D002889 ORTHO05D003366 2.2e-14 83.2 53 75.5
Aqoxy5G00053 Aquilegia oxysepala HOM05D002889 ORTHO05D003366 2.8e-14 82.8 53 75.5
Ca_08769_v3 Cicer arietinum L. HOM05D002889 ORTHO05D003366 2.8e-14 82.8 53 75.5
HanXRQChr13g0409041 Helianthus annuus HOM05D002889 ORTHO05D003366 2.8e-14 82.8 84 54.8
Medtr7g099480 Medicago truncatula HOM05D002889 ORTHO05D003366 2.8e-14 82.8 53 75.5
TPR.G7556 Trifolium pratense HOM05D002889 ORTHO05D003366 2.8e-14 82.8 53 75.5
Eucgr.H00823 Eucalyptus grandis HOM05D002889 ORTHO05D003366 3.7e-14 82.4 53 75.5
Lj2C1137G6 Lonicera japonica HOM05D002889 ORTHO05D003366 3.7e-14 82.4 53 75.5
MBI10_g16806_MAGBIO Magnolia biondii HOM05D002889 ORTHO05D003366 3.7e-14 82.4 53 73.6
Manes.12G044400 Manihot esculenta HOM05D002889 ORTHO05D003366 3.7e-14 82.4 53 73.6
Nn1g03087 Nelumbo nucifera HOM05D002889 ORTHO05D003366 3.7e-14 82.4 53 73.6
Oeu017344.1 Olea europaea HOM05D002889 ORTHO05D003366 3.7e-14 82.4 53 75.5
Phvul.001G168400 Phaseolus vulgaris HOM05D002889 ORTHO05D003366 3.7e-14 82.4 62 67.7
Solyc06g008040.3 Solanum lycopersicum HOM05D002889 ORTHO05D003366 3.7e-14 82.4 131 43.5
Sopen06g002880 Solanum pennellii HOM05D002889 ORTHO05D003366 3.7e-14 82.4 131 43.5
BcaC06g36696 Brassica carinata HOM05D002889 ORTHO05D003366 4.8e-14 82.0 119 45.4
HanXRQChr10g0287251 Helianthus annuus HOM05D002889 ORTHO05D003366 4.8e-14 82.0 82 56.1
TAR365G1138 Trochodendron aralioides HOM05D002889 ORTHO05D003366 4.8e-14 82.0 53 73.6
vmacro14774 Vaccinium macrocarpon HOM05D002889 ORTHO05D003366 4.8e-14 82.0 53 73.6
Atru.chr5.1927 Acer truncatum HOM05D002889 ORTHO05D003366 6.3e-14 81.6 53 75.5
BcaC04g22811 Brassica carinata HOM05D002889 ORTHO05D003366 6.3e-14 81.6 129 43.4
A07p00540 Brassica napus HOM05D002889 ORTHO05D003366 6.3e-14 81.6 129 43.4
A09p12740 Brassica napus HOM05D002889 ORTHO05D003366 6.3e-14 81.6 129 43.4
C07p00990 Brassica napus HOM05D002889 ORTHO05D003366 6.3e-14 81.6 129 43.4
C09p15080 Brassica napus HOM05D002889 ORTHO05D003366 6.3e-14 81.6 129 43.4
BolC9t54414H Brassica oleracea HOM05D002889 ORTHO05D003366 6.3e-14 81.6 129 43.4
BraA07t27848Z Brassica rapa HOM05D002889 ORTHO05D003366 6.3e-14 81.6 129 43.4
Ciclev10018498m.g Citrus clementina HOM05D002889 ORTHO05D003366 6.3e-14 81.6 53 75.5
Gohir.A07G154000 Gossypium hirsutum HOM05D002889 ORTHO05D003366 6.3e-14 81.6 50 80.0
Lsat_1_v5_gn_9_11241 Lactuca sativa HOM05D002889 ORTHO05D003366 6.3e-14 81.6 53 71.7
Oeu015449.1 Olea europaea HOM05D002889 ORTHO05D003366 6.3e-14 81.6 53 75.5
Aa31LG8G17120 Aethionema arabicum HOM05D002889 ORTHO05D003366 8.3e-14 81.3 128 42.2
AT2G20190 Arabidopsis thaliana HOM05D002889 ORTHO05D003366 8.3e-14 81.3 129 42.6
ClCG09G009410 Citrullus lanatus HOM05D002889 ORTHO05D003366 8.3e-14 81.3 55 67.3
MELO3C024150.2 Cucumis melo HOM05D002889 ORTHO05D003366 8.3e-14 81.3 55 67.3
Glyma.10G042600 Glycine max HOM05D002889 ORTHO05D003366 8.3e-14 81.3 53 77.4
PSO170G4103 Papaver somniferum HOM05D002889 ORTHO05D003366 8.3e-14 81.3 53 73.6
PSO764G0331 Papaver somniferum HOM05D002889 ORTHO05D003366 8.3e-14 81.3 53 73.6
Sed0001453 Sechium edule HOM05D002889 ORTHO05D003366 8.3e-14 81.3 55 67.3
TAR636G2078 Trochodendron aralioides HOM05D002889 ORTHO05D003366 8.3e-14 81.3 53 73.6
BcaB03g16811 Brassica carinata HOM05D002889 ORTHO05D003366 1.4e-13 80.5 129 42.6
BcaNung04093 Brassica carinata HOM05D002889 ORTHO05D003366 1.4e-13 80.5 129 42.6
BraA09t36918Z Brassica rapa HOM05D002889 ORTHO05D003366 1.4e-13 80.5 129 42.6
CAN.G941.45 Capsicum annuum HOM05D002889 ORTHO05D003366 1.4e-13 80.5 53 75.5
Duzib138G1300 Durio zibethinus HOM05D002889 ORTHO05D003366 1.4e-13 80.5 48 79.2
Glyma.03G170000 Glycine max HOM05D002889 ORTHO05D003366 1.4e-13 80.5 62 66.1
BolC7t40536H Brassica oleracea HOM05D002889 ORTHO05D003366 1.8e-13 80.1 129 42.6
Carub.0003s3449 Capsella rubella HOM05D002889 ORTHO05D003366 1.8e-13 80.1 52 75.0
CARHR110690 Cardamine hirsuta HOM05D002889 ORTHO05D003366 1.8e-13 80.1 52 75.0
CsaV3_7G025450 Cucumis sativus L. HOM05D002889 ORTHO05D003366 1.8e-13 80.1 55 65.5
Thhalv10001879m.g Eutrema salsugineum HOM05D002889 ORTHO05D003366 1.8e-13 80.1 52 75.0
Glyma.13G130000 Glycine max HOM05D002889 ORTHO05D003366 1.8e-13 80.1 53 75.5
Sp3g33430 Schrenkiella parvula HOM05D002889 ORTHO05D003366 1.8e-13 80.1 52 75.0
Solyc09g063030.4 Solanum lycopersicum HOM05D002889 ORTHO05D003366 1.8e-13 80.1 53 75.5
Sopen09g025200 Solanum pennellii HOM05D002889 ORTHO05D003366 1.8e-13 80.1 53 75.5
CDE09G0867 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 2.4e-13 79.7 52 71.2
TAR362G1318 Trochodendron aralioides HOM05D002889 ORTHO05D003366 2.4e-13 79.7 55 69.1
Actinidia09497 Actinidia chinensis HOM05D002889 ORTHO05D003366 3.1e-13 79.3 132 45.5
AL3G47890 Arabidopsis lyrata HOM05D002889 ORTHO05D003366 3.1e-13 79.3 129 42.6
Nitab4.5_0000813g0100 Nicotiana tabacum HOM05D002889 ORTHO05D003366 3.1e-13 79.3 53 73.6
Sed0016475 Sechium edule HOM05D002889 ORTHO05D003366 3.1e-13 79.3 55 67.3
Nn3g19858 Nelumbo nucifera HOM05D002889 ORTHO05D003366 4.1e-13 79.0 53 69.8
VMungo0720G0228 Vigna mungo HOM05D002889 ORTHO05D003366 4.1e-13 79.0 53 71.7
CAN.G503.27 Capsicum annuum HOM05D002889 ORTHO05D003366 5.4e-13 78.6 53 75.5
Ca_09624_v3 Cicer arietinum L. HOM05D002889 ORTHO05D003366 7.0e-13 78.2 53 73.6
Peaxi162Scf00052g02011 Petunia axillaris HOM05D002889 ORTHO05D003366 7.0e-13 78.2 53 71.7
TPR.G35800 Trifolium pratense HOM05D002889 ORTHO05D003366 7.0e-13 78.2 53 73.6
Lj5g0008167 Lotus japonicus HOM05D002889 ORTHO05D003366 9.1e-13 77.8 53 73.6
Medtr1g069165 Medicago truncatula HOM05D002889 ORTHO05D003366 9.1e-13 77.8 53 73.6
Phvul.007G156100 Phaseolus vulgaris HOM05D002889 ORTHO05D003366 9.1e-13 77.8 53 71.7
Psat6g064880 Pisum sativum HOM05D002889 ORTHO05D003366 9.1e-13 77.8 53 73.6
SEGI_29841 Sequoiadendron giganteum HOM05D002889 ORTHO05D003366 9.1e-13 77.8 53 67.9
PGR083G0457 Punica granatum HOM05D002889 ORTHO05D003366 1.2e-12 77.4 60 65.0
Nitab4.5_0002727g0040 Nicotiana tabacum HOM05D002889 ORTHO05D003366 1.6e-12 77.0 53 73.6
Nitab4.5_0003180g0050 Nicotiana tabacum HOM05D002889 ORTHO05D003366 1.6e-12 77.0 53 73.6
arahy.Tifrunner.gnm1.ann1.CB4TML Arachis hypogaea HOM05D002889 ORTHO05D003366 2.7e-12 76.3 62 64.5
SHI47266 Sapria himalayana HOM05D002889 ORTHO05D003366 3.5e-12 75.9 53 66.0
Peaxi162Scf00499g00610 Petunia axillaris HOM05D002889 ORTHO05D003366 4.5e-12 75.5 48 75.0
Lalb_Chr02g0152941 Lupinus albus HOM05D002889 ORTHO05D003366 7.7e-12 74.7 53 71.7
Mapoly0066s0036 Marchantia polymorpha HOM05D002889 ORTHO05D003366 7.7e-12 74.7 53 62.3
Os02g0617300 Oryza sativa ssp. japonica HOM05D002889 ORTHO05D003366 7.7e-12 74.7 52 65.4
Os04g0507500 Oryza sativa ssp. japonica HOM05D002889 ORTHO05D003366 7.7e-12 74.7 52 65.4
ATR0787G124 Amborella trichopoda HOM05D002889 ORTHO05D003366 1.0e-11 74.3 52 67.3
arahy.Tifrunner.gnm1.ann1.73DRY2 Arachis hypogaea HOM05D002889 ORTHO05D003366 1.0e-11 74.3 62 62.9
vmacro14019 Vaccinium macrocarpon HOM05D002889 ORTHO05D028411 1.3e-11 73.9 127 41.7
AagrBONN_evm.TU.Sc2ySwM_228.3600 Anthoceros agrestis HOM05D002889 ORTHO05D003366 1.7e-11 73.6 80 41.2
CDE08G0296 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 5.0e-11 72.0 109 39.4
Glyma.19G060900 Glycine max HOM05D002889 ORTHO05D003366 5.0e-11 72.0 52 69.2
SMO308G0007 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 5.0e-11 72.0 66 57.6
HPP92_027293 Vanilla planifolia HOM05D002889 ORTHO05D003366 5.0e-11 72.0 52 63.5
Zm00001eb426220 Zea mays HOM05D002889 ORTHO05D003366 5.0e-11 72.0 52 63.5
Zm00001eb077900 Zea mays HOM05D002889 ORTHO05D003366 8.5e-11 71.2 52 63.5
Pp3c24_11460 Physcomitrium patens HOM05D002889 ORTHO05D003366 1.5e-10 70.5 53 60.4
Pp3c8_18290 Physcomitrium patens HOM05D002889 ORTHO05D003366 4.2e-10 68.9 53 58.5
CDE02G3724 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 5.5e-10 68.6 53 56.6
Zm00001eb116890 Zea mays HOM05D002889 ORTHO05D003366 5.5e-10 68.6 52 59.6
COL.COLO4_05728 Corchorus olitorius HOM05D002889 ORTHO05D003366 1.4e-08 63.9 57 54.4
AagrBONN_evm.TU.Sc2ySwM_344.3270 Anthoceros agrestis HOM05D002889 ORTHO05D003366 3.0e-08 62.8 80 41.2
Pp3c3_31820 Physcomitrium patens HOM05D002889 ORTHO05D003366 2.6e-07 59.7 53 52.8
SMO358G0024 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 9.8e-07 57.8 53 52.8
Gorai.006G054600 Gossypium raimondii HOM05D002889 ORTHO05D003366 4.9e-06 55.5 53 56.6
CSS0011024 Camellia sinensis var. sinensis HOM05D002889 ORTHO05D028411 8.3e-06 54.7 34 76.5


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