Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09746 Striga asiatica HOM05D004441 ORTHO05D003109 3.0e-118 428.7 244 100.0
SGA_v2.0_scaffold100G29660 Striga asiatica HOM05D004441 ORTHO05D003109 4.7e-47 192.2 232 55.2
Migut.M01162 Erythranthe guttata HOM05D004441 ORTHO05D003109 1.5e-32 144.1 268 43.3
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 5.2e-30 135.6 256 44.9
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 5.2e-30 135.6 256 44.9
Nitab4.5_0001820g0050 Nicotiana tabacum HOM05D004441 ORTHO05D003109 1.1e-24 117.9 249 41.4
Nitab4.5_0007319g0010 Nicotiana tabacum HOM05D004441 ORTHO05D003109 9.5e-24 114.8 249 40.6
Oeu026007.1 Olea europaea HOM05D004441 ORTHO05D003109 3.1e-22 109.8 262 38.5
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 1.3e-20 104.4 266 38.0
Peaxi162Scf00612g00043 Petunia axillaris HOM05D004441 ORTHO05D003109 8.3e-20 101.7 141 53.2
PGSC0003DMG400022372 Solanum tuberosum HOM05D004441 ORTHO05D003109 2.1e-18 97.1 257 39.7
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 4.6e-18 95.9 264 39.0
Solyc02g078760.1 Solanum lycopersicum HOM05D004441 ORTHO05D003109 4.6e-18 95.9 250 41.2
Sopen02g023590 Solanum pennellii HOM05D004441 ORTHO05D003109 2.3e-17 93.6 257 38.5
Oeu029188.1 Olea europaea HOM05D004441 ORTHO05D003109 1.1e-16 91.3 259 36.7
Dinv39787 Davidia involucrata HOM05D004441 ORTHO05D003109 2.8e-15 86.7 141 46.8
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 4.0e-14 82.8 268 35.1
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 5.2e-14 82.4 256 39.1
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 5.2e-14 82.4 256 39.1
DCAR_004123 Daucus carota HOM05D004441 ORTHO05D003109 1.1e-11 74.7 260 36.2
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 1.1e-11 74.7 266 33.5
TWI63G0258 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 7.1e-11 72.0 275 36.4
Rhsim13G0175700 Rhododendron simsii HOM05D004441 ORTHO05D003109 2.7e-10 70.1 262 33.2
Migut.H01500 Erythranthe guttata HOM05D004441 ORTHO05D003109 3.5e-10 69.7 205 34.6
MBI18_g13205_MAGBIO Magnolia biondii HOM05D004441 ORTHO05D003109 7.8e-10 68.6 159 42.1
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 1.3e-09 67.8 264 33.3
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 3.9e-09 66.2 195 38.5
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 6.6e-09 65.5 266 34.6
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 1.5e-08 64.3 264 33.3
CiPaw.09G160900 Carya illinoinensis HOM05D004441 ORTHO05D003109 1.9e-08 63.9 262 33.2
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 1.9e-08 63.9 266 32.3
Nitab4.5_0001833g0010 Nicotiana tabacum HOM05D021131 ORTHO05D022971 7.3e-08 62.0 65 56.9
Nitab4.5_0008104g0020 Nicotiana tabacum HOM05D021131 ORTHO05D022971 9.5e-08 61.6 102 42.2
Lsat_1_v5_gn_7_20000 Lactuca sativa HOM05D004441 ORTHO05D003109 1.2e-07 61.2 191 36.6
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 1.2e-07 61.2 262 32.4
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 1.6e-07 60.8 262 34.0
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 6.2e-07 58.9 284 34.2
Solyc03g006600.1 Solanum lycopersicum HOM05D021131 ORTHO05D022971 1.1e-06 58.2 66 53.0
Sopen03g002610 Solanum pennellii HOM05D021131 ORTHO05D022971 1.1e-06 58.2 66 53.0
Hma1.2p1_0835F.1_g225850 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.8e-06 57.4 160 40.0
Hma1.2p1_0835F.1_g225855 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.8e-06 57.4 160 40.0
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 2.4e-06 57.0 264 33.3
PGSC0003DMG400005055 Solanum tuberosum HOM05D021131 ORTHO05D022971 2.4e-06 57.0 66 51.5
Peaxi162Scf00007g00287 Petunia axillaris HOM05D009304 ORTHO05D003109 3.1e-06 56.6 266 33.1
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 4.0e-06 56.2 274 29.9
Gohir.D05G166400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 5.2e-06 55.8 284 33.5


User provided reference genes

Program Settings