Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 1.8e-198 695.7 333 100.0
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 2.8e-175 618.6 333 85.9
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 4.7e-175 617.8 335 86.9
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 5.8e-173 610.9 334 85.6
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.4e-171 606.3 333 85.6
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 2.4e-171 605.5 333 85.3
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 3.2e-171 605.1 333 85.0
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 7.0e-171 604.0 322 86.0
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 1.6e-170 602.8 333 83.8
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 4.6e-170 601.3 334 84.1
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 7.8e-170 600.5 334 84.1
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 3.0e-169 598.6 334 83.8
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 5.1e-169 597.8 336 84.2
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.1e-168 596.7 325 85.8
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 1.1e-168 596.7 321 85.0
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 5.6e-168 594.3 331 84.0
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 6.2e-167 590.9 330 83.6
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 8.1e-167 590.5 319 86.5
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 2.0e-165 585.9 315 87.0
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 5.8e-165 584.3 311 85.9
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 7.5e-165 583.9 317 85.5
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 1.7e-164 582.8 321 84.1
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 2.9e-164 582.0 327 82.6
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 2.9e-164 582.0 324 82.7
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 2.9e-164 582.0 315 86.0
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 2.9e-164 582.0 326 82.8
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.9e-164 581.3 326 83.1
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 8.3e-164 580.5 318 84.6
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 8.3e-164 580.5 317 84.2
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 8.3e-164 580.5 317 84.2
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 8.3e-164 580.5 323 83.9
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 1.1e-163 580.1 323 83.6
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.4e-163 579.7 324 82.7
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.9e-163 579.3 321 83.2
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 2.4e-163 578.9 311 86.2
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 2.4e-163 578.9 318 84.6
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 3.2e-163 578.6 325 83.1
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 3.2e-163 578.6 325 83.1
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 5.4e-163 577.8 311 85.2
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 5.4e-163 577.8 326 82.8
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 9.2e-163 577.0 316 83.9
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 9.2e-163 577.0 321 83.2
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 2.1e-162 575.9 311 84.9
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 2.1e-162 575.9 324 83.0
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.7e-162 575.5 321 83.2
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 3.5e-162 575.1 328 81.4
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 4.6e-162 574.7 325 82.2
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 7.8e-162 573.9 311 84.9
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 1.0e-161 573.5 312 84.6
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.0e-161 573.5 314 84.1
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 1.7e-161 572.8 328 82.6
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 1.7e-161 572.8 326 81.0
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 2.3e-161 572.4 331 80.4
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 2.3e-161 572.4 322 82.3
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 3.9e-161 571.6 326 81.9
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 5.1e-161 571.2 326 81.9
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 8.6e-161 570.5 324 82.4
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 1.9e-160 569.3 313 84.0
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 3.3e-160 568.5 320 82.8
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 3.3e-160 568.5 321 81.9
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 3.3e-160 568.5 319 83.4
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 5.6e-160 567.8 323 80.5
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 5.6e-160 567.8 323 80.5
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 5.6e-160 567.8 320 82.5
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 5.6e-160 567.8 320 82.5
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 9.5e-160 567.0 318 83.3
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.2e-159 566.6 328 80.2
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 2.1e-159 565.8 314 82.5
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 2.1e-159 565.8 333 79.9
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 4.7e-159 564.7 330 80.6
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.1e-158 563.5 329 80.5
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 4.0e-158 561.6 320 80.9
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 6.8e-158 560.8 336 79.5
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 6.8e-158 560.8 336 79.5
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 6.8e-158 560.8 311 83.3
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 8.9e-158 560.5 324 79.6
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.5e-157 559.7 311 83.0
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 1.5e-157 559.7 317 81.7
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 2.0e-157 559.3 311 83.9
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 2.6e-157 558.9 336 79.2
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 5.8e-157 557.8 302 84.8
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 7.6e-157 557.4 313 81.8
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 9.9e-157 557.0 321 80.7
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 1.3e-156 556.6 322 80.7
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 1.3e-156 556.6 316 80.7
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 2.9e-156 555.4 375 72.0
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 1.4e-155 553.1 320 79.7
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 1.4e-155 553.1 325 79.7
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 2.4e-155 552.4 310 81.6
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 7.1e-155 550.8 329 79.9
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 7.1e-155 550.8 336 78.0
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 7.1e-155 550.8 336 78.0
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 2.1e-154 549.3 315 79.4
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 2.7e-154 548.9 310 81.6
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 4.6e-154 548.1 318 79.6
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 1.0e-153 547.0 314 81.2
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 1.7e-153 546.2 329 79.0
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 5.1e-153 544.7 325 79.7
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 6.6e-153 544.3 320 79.1
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 1.5e-152 543.1 320 78.4
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 1.1e-150 537.0 327 76.8
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 3.1e-150 535.4 327 76.5
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 3.1e-150 535.4 320 76.9
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 3.8e-148 528.5 345 73.6
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 6.4e-148 527.7 314 78.0
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 1.6e-146 523.1 303 78.9
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.6e-146 523.1 316 79.1
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 7.8e-146 520.8 315 76.2
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 1.4e-142 510.0 316 74.4
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 1.8e-142 509.6 278 84.9
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.8e-142 509.6 276 85.1
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 1.5e-141 506.5 302 75.5
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 1.3e-137 493.4 279 82.1
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 3.1e-134 482.3 321 69.8
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 5.1e-129 464.9 314 66.9
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 5.1e-129 464.9 314 66.9
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 8.2e-127 457.6 251 82.5
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 2.4e-126 456.1 307 65.8
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 1.2e-125 453.8 342 64.9
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.0e-125 453.0 304 67.4
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.2e-116 422.9 306 61.8
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 9.4e-115 417.5 225 86.2
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 6.3e-103 378.3 323 56.3
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 2.6e-101 372.9 246 71.1
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 2.7e-98 362.8 215 78.1
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 4.8e-87 325.5 314 50.6
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 1.2e-80 304.3 351 43.6
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 2.7e-69 266.5 360 39.7
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 4.1e-54 216.1 123 77.2
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 6.9e-33 145.6 82 82.9
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 9.3e-30 135.2 89 76.4
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.4e-22 109.4 80 68.8
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 5.6e-19 99.4 68 70.6
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 7.1e-14 82.4 52 73.1
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 2.7e-13 80.5 45 77.8
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 3.9e-12 76.6 42 76.2
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 3.9e-12 76.6 41 80.5
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 8.4e-07 58.9 45 53.3


User provided reference genes

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