Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 5.7e-73 278.1 215 100.0
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 5.2e-58 228.4 215 63.7
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 6.8e-50 201.4 216 62.0
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 4.6e-46 188.7 216 55.1
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 5.0e-45 185.3 216 56.9
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 5.0e-45 185.3 219 54.3
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 5.0e-45 185.3 224 54.0
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 8.6e-45 184.5 207 60.9
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 7.3e-44 181.4 216 55.1
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 2.1e-43 179.9 216 55.6
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 4.7e-43 178.7 216 55.1
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 8.1e-43 177.9 217 53.9
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 1.4e-42 177.2 217 53.9
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 1.4e-42 177.2 216 54.6
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 3.1e-42 176.0 216 54.6
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 1.2e-41 174.1 216 54.2
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 2.6e-41 172.9 217 53.0
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 3.4e-41 172.6 213 52.6
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 3.4e-41 172.6 186 57.0
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 4.4e-41 172.2 212 52.4
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 7.5e-41 171.4 215 52.1
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 1.3e-40 170.6 216 54.2
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 2.2e-40 169.9 216 52.8
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 3.7e-40 169.1 196 51.5
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 6.4e-40 168.3 217 50.2
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 2.4e-39 166.4 217 52.5
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 2.4e-39 166.4 215 49.3
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 3.2e-39 166.0 215 52.6
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 5.4e-39 165.2 222 48.6
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 7.1e-39 164.9 217 49.8
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 9.2e-39 164.5 216 51.4
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.2e-38 164.1 215 48.8
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 1.6e-38 163.7 216 55.1
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 1.6e-38 163.7 209 51.7
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 2.1e-38 163.3 216 52.3
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 2.7e-38 162.9 219 50.7
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 4.6e-38 162.2 215 49.3
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 8.6e-37 157.9 217 49.8
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 1.5e-36 157.1 228 48.2
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 1.5e-36 157.1 216 60.2
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 4.3e-36 155.6 207 48.3
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 1.6e-35 153.7 216 49.5
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 2.1e-35 153.3 217 51.2
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 3.6e-35 152.5 217 48.8
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 4.7e-35 152.1 219 48.4
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 4.7e-35 152.1 214 48.1
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 6.2e-35 151.8 206 47.6
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 1.1e-34 151.0 218 45.9
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 1.1e-34 151.0 216 48.6
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 1.4e-34 150.6 211 46.4
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 1.4e-34 150.6 205 51.2
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 2.3e-34 149.8 181 51.4
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 6.8e-34 148.3 212 49.5
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 8.9e-34 147.9 219 48.9
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 1.2e-33 147.5 214 46.3
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 1.5e-33 147.1 222 46.8
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 1.5e-33 147.1 219 47.5
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 1.5e-33 147.1 217 47.9
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 2.0e-33 146.7 173 53.8
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 2.0e-33 146.7 173 53.8
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 9.9e-33 144.4 201 47.3
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 3.8e-32 142.5 216 56.9
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 6.4e-32 141.7 213 45.5
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 8.4e-32 141.4 230 43.9
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 8.4e-32 141.4 217 47.0
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 1.1e-31 141.0 233 43.3
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 1.1e-31 141.0 219 47.5
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 1.4e-31 140.6 219 45.2
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 3.2e-31 139.4 218 44.5
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.2e-30 137.5 224 46.0
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 2.1e-30 136.7 216 47.2
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 2.7e-30 136.3 203 45.8
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 4.6e-30 135.6 216 44.0
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 4.6e-30 135.6 255 42.0
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 6.0e-30 135.2 217 43.8
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 3.9e-29 132.5 220 53.6
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 1.1e-28 131.0 178 48.9
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 3.3e-28 129.4 218 62.8
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 4.3e-28 129.0 216 43.1
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 2.8e-27 126.3 106 69.8
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 5.2e-26 122.1 216 58.8
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.2e-25 120.9 107 67.3
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 2.2e-24 116.7 180 45.0
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 1.4e-23 114.0 198 39.9
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 5.4e-23 112.1 173 64.7
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 7.1e-23 111.7 219 48.9
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 9.3e-23 111.3 174 44.8
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.2e-22 110.9 106 64.2
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 2.1e-22 110.2 190 42.6
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 6.0e-22 108.6 155 46.5
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 6.0e-22 108.6 207 40.6
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 3.0e-21 106.3 179 55.3
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 6.6e-21 105.1 218 39.4
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 6.6e-21 105.1 149 47.0
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 8.7e-21 104.8 201 37.8
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.1e-20 104.4 162 45.7
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 1.5e-20 104.0 205 39.0
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 1.9e-20 103.6 106 62.3
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 2.5e-20 103.2 155 45.2
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 9.6e-20 101.3 213 33.8
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 9.6e-20 101.3 152 45.4
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 6.2e-19 98.6 150 43.3
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 8.1e-19 98.2 150 45.3
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 1.1e-18 97.8 180 36.7
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 4.0e-18 95.9 216 53.7
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 4.0e-18 95.9 93 59.1
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 1.4e-15 87.4 103 56.3
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 3.5e-14 82.8 88 60.2
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 1.1e-12 77.8 60 70.0
Prupe.4G042300 Prunus persica HOM05D006133 ORTHO05D007855 2.5e-12 76.6 64 65.6
Gohir.A11G286823 Gossypium hirsutum HOM05D006133 ORTHO05D007855 6.9e-10 68.6 77 59.7
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 2.6e-09 66.6 99 49.5
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 1.7e-08 63.9 211 26.1
C04p15300 Brassica napus HOM05D006133 ORTHO05D007855 2.9e-08 63.2 45 77.8
HPP92_006839 Vanilla planifolia HOM05D006133 ORTHO05D007855 3.8e-08 62.8 53 64.2


User provided reference genes

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