Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 6.3e-67 257.3 129 100.0
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 3.4e-65 251.5 126 99.2
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 3.4e-65 251.5 126 99.2
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 7.2e-63 243.8 126 96.0
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 7.2e-63 243.8 126 96.0
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 1.6e-62 242.7 126 95.2
SGA_v2.0_scaffold621G53225 Striga asiatica HOM05D011630 ORTHO05D014269 2.0e-60 235.7 125 94.4
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 9.7e-60 233.4 126 92.1
SGA_v2.0_scaffold30G12367 Striga asiatica HOM05D011630 ORTHO05D014269 1.2e-57 226.5 126 89.7
SGA_v2.0_scaffold366G50026 Striga asiatica HOM05D011630 ORTHO05D014269 1.3e-51 206.5 110 90.9
SGA_v2.0_scaffold30G12563 Striga asiatica HOM05D011630 ORTHO05D002863 3.6e-22 108.6 64 89.1
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 7.3e-15 84.3 98 48.0
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 2.0e-12 76.3 66 53.0
SGA_v2.0_scaffold211G42175 Striga asiatica HOM05D011630 ORTHO05D014269 2.0e-12 76.3 63 52.4
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 2.4e-10 69.3 103 39.8
SGA_v2.0_scaffold150G36678 Striga asiatica HOM05D011630 ORTHO05D014269 1.2e-09 67.0 68 47.1
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-09 65.1 119 33.6
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 2.3e-08 62.8 90 40.0
SGA_v2.0_scaffold12G06209 Striga asiatica HOM05D000403 ORTHO05D000350 2.3e-08 62.8 52 57.7
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 3.9e-08 62.0 45 53.3
Solyc10g055427.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 5.0e-08 61.6 126 35.7
Solyc09g072730.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 6.6e-08 61.2 126 35.7
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 8.6e-08 60.8 60 45.0
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.1e-07 60.5 104 37.5
SGA_v2.0_scaffold8G04646 Striga asiatica HOM05D000134 ORTHO05D000168 1.1e-07 60.5 48 60.4
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 1.5e-07 60.1 60 45.0
PGSC0003DMG400008721 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.5e-07 60.1 120 37.5
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-07 59.7 60 45.0
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-07 59.7 60 45.0
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-07 59.7 60 45.0
PGSC0003DMG400029733 Solanum tuberosum HOM05D009408 ORTHO05D000309 3.3e-07 58.9 120 36.7
AL8G10620 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 4.3e-07 58.5 137 35.0
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 4.3e-07 58.5 59 45.8
Solyc03g096303.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 4.3e-07 58.5 111 30.6
Solyc12g062733.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 4.3e-07 58.5 123 30.1
CAN.G1014.58 Capsicum annuum HOM05D009408 ORTHO05D000309 5.6e-07 58.2 59 49.2
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 5.6e-07 58.2 60 43.3
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 5.6e-07 58.2 60 45.0
CAN.G1343.17 Capsicum annuum HOM05D009408 ORTHO05D000309 7.3e-07 57.8 87 37.9
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 7.3e-07 57.8 54 46.3
SGA_v2.0_scaffold100G29657 Striga asiatica HOM05D001383 ORTHO05D000309 7.3e-07 57.8 54 46.3
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 9.5e-07 57.4 60 43.3
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 9.5e-07 57.4 81 38.3
SGA_v2.0_scaffold670G53420 Striga asiatica HOM05D001383 ORTHO05D000309 9.5e-07 57.4 54 46.3
AL9U10530 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.2e-06 57.0 129 34.1
CAN.G548.7 Capsicum annuum HOM05D009408 ORTHO05D000309 1.2e-06 57.0 79 38.0
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 1.2e-06 57.0 47 46.8
PGSC0003DMG400014126 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.2e-06 57.0 105 38.1
AL1G58110 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.6e-06 56.6 137 34.3
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-06 56.6 83 39.8
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-06 56.6 83 39.8
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 1.6e-06 56.6 44 56.8
AL3G46750 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 2.1e-06 56.2 137 34.3
AL6G41320 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 2.1e-06 56.2 129 34.1
CAN.G1801.2 Capsicum annuum HOM05D009408 ORTHO05D000309 2.1e-06 56.2 84 38.1
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-06 56.2 75 38.7
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-06 56.2 81 37.0
Lj3P715T47 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-06 56.2 131 32.1
Lj6P779T66 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-06 56.2 119 33.6
SGA_v2.0_scaffold364G49972 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 56.2 41 51.2
SGA_v2.0_scaffold45G16985 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 56.2 41 51.2
Lj2P525T32 Lonicera japonica HOM05D008126 ORTHO05D000309 2.8e-06 55.8 60 41.7
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 2.8e-06 55.8 45 48.9
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 2.8e-06 55.8 45 51.1
PGSC0003DMG400041825 Solanum tuberosum HOM05D009408 ORTHO05D000309 2.8e-06 55.8 120 36.7
SGA_v2.0_scaffold80G25824 Striga asiatica HOM05D001383 ORTHO05D000309 2.8e-06 55.8 93 35.5
AUR62024396 Chenopodium quinoa HOM05D005931 ORTHO05D005553 3.6e-06 55.5 90 33.3
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 3.6e-06 55.5 105 36.2
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 3.6e-06 55.5 91 35.2
Lj2P720T1 Lonicera japonica HOM05D008126 ORTHO05D000309 3.6e-06 55.5 84 38.1
Lj2P759T3 Lonicera japonica HOM05D008126 ORTHO05D000309 3.6e-06 55.5 60 43.3
SGA_v2.0_scaffold267G46184 Striga asiatica HOM05D035478 ORTHO05D000309 3.6e-06 55.5 90 33.3
AL5G19890 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 4.7e-06 55.1 137 33.6
AL5G20070 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 4.7e-06 55.1 137 33.6
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 4.7e-06 55.1 97 34.0
CAN.G11.43 Capsicum annuum HOM05D009408 ORTHO05D000309 4.7e-06 55.1 71 43.7
AUR62015041 Chenopodium quinoa HOM05D005931 ORTHO05D005553 4.7e-06 55.1 91 30.8
Lj5P132T39 Lonicera japonica HOM05D008126 ORTHO05D000309 4.7e-06 55.1 128 29.7
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 4.7e-06 55.1 41 53.7
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 4.7e-06 55.1 41 53.7
Carub.0008s0717 Capsella rubella HOM05D010286 ORTHO05D000309 6.2e-06 54.7 116 33.6
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 6.2e-06 54.7 41 51.2
Lj2P828T8 Lonicera japonica HOM05D008126 ORTHO05D000309 6.2e-06 54.7 75 38.7
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 6.2e-06 54.7 48 47.9
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 8.1e-06 54.3 97 34.0
CAN.G490.13 Capsicum annuum HOM05D009408 ORTHO05D000309 8.1e-06 54.3 59 47.5
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 8.1e-06 54.3 43 55.8
Lj1P415T15 Lonicera japonica HOM05D008126 ORTHO05D000309 8.1e-06 54.3 130 30.0
Lj3P53T19 Lonicera japonica HOM05D008126 ORTHO05D000309 8.1e-06 54.3 55 45.5
Lj4P758T63 Lonicera japonica HOM05D008126 ORTHO05D000309 8.1e-06 54.3 77 36.4
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 8.1e-06 54.3 128 30.5
Nitab4.5_0000319g0130 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.1e-06 54.3 44 47.7
SGA_v2.0_scaffold55G19817 Striga asiatica HOM05D001383 ORTHO05D000309 8.1e-06 54.3 45 46.7
VMungo0540G1207 Vigna mungo HOM05D008573 ORTHO05D009911 8.1e-06 54.3 100 35.0


User provided reference genes

Program Settings