Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 1.5e-87 326.2 172 100.0
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 5.8e-76 287.7 172 85.5
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.3e-72 276.6 172 82.6
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.7e-72 276.2 172 82.6
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 3.0e-72 275.4 172 83.1
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 1.2e-70 270.0 172 80.8
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 1.6e-70 269.6 172 80.8
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 3.6e-70 268.5 172 79.7
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 4.7e-70 268.1 172 79.7
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 6.2e-70 267.7 172 80.2
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 8.1e-70 267.3 172 80.2
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.8e-69 266.2 172 79.1
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 4.0e-69 265.0 173 79.8
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 6.8e-69 264.2 172 78.5
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 1.2e-68 263.5 172 77.3
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.5e-68 263.1 172 79.1
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 3.4e-68 261.9 172 76.7
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 3.4e-68 261.9 172 77.9
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 7.6e-68 260.8 172 77.9
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 9.9e-68 260.4 172 77.3
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 1.3e-67 260.0 172 77.3
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 1.3e-67 260.0 172 77.9
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.7e-67 259.6 172 77.3
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 1.7e-67 259.6 171 77.2
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 2.9e-67 258.8 172 77.3
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 2.9e-67 258.8 173 76.9
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 2.9e-67 258.8 174 78.2
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 4.9e-67 258.1 173 77.5
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 1.1e-66 256.9 172 76.2
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 1.9e-66 256.1 174 77.0
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 2.4e-66 255.8 173 77.5
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 2.4e-66 255.8 181 75.1
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 3.2e-66 255.4 173 75.7
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 4.1e-66 255.0 174 76.4
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 4.1e-66 255.0 174 76.4
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 7.1e-66 254.2 172 76.2
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 1.6e-65 253.1 169 75.1
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 1.6e-65 253.1 172 73.8
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 2.1e-65 252.7 173 76.3
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.7e-65 252.3 180 75.0
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 6.0e-65 251.1 172 77.3
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 1.3e-64 250.0 172 75.0
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 3.0e-64 248.8 172 73.8
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 3.9e-64 248.4 172 73.8
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 5.1e-64 248.1 172 76.7
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 5.1e-64 248.1 172 75.6
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 5.1e-64 248.1 172 75.6
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.9e-63 246.1 172 73.3
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 2.5e-63 245.7 172 74.4
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 3.3e-63 245.4 167 75.4
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 4.3e-63 245.0 173 74.0
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 5.6e-63 244.6 172 73.8
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 7.3e-63 244.2 193 67.9
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 9.6e-63 243.8 164 77.4
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 1.2e-62 243.4 173 74.0
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 2.8e-62 242.3 172 73.3
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 2.8e-62 242.3 168 77.4
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 1.2e-60 236.9 173 71.7
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 4.4e-60 235.0 167 73.7
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 1.3e-59 233.4 150 78.7
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 2.9e-59 232.3 150 80.0
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 1.1e-58 230.3 173 70.5
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 2.4e-58 229.2 173 70.5
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 4.2e-58 228.4 149 78.5
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 9.3e-58 227.3 144 79.9
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 4.6e-57 224.9 149 77.9
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 4.6e-57 224.9 172 69.2
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 1.3e-56 223.4 144 79.2
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 3.9e-56 221.9 173 72.3
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 4.3e-55 218.4 165 64.8
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 4.3e-55 218.4 173 68.2
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 5.6e-55 218.0 173 68.2
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 5.6e-55 218.0 144 77.8
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 9.6e-55 217.2 173 67.6
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 1.6e-54 216.5 173 68.2
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 2.1e-54 216.1 173 67.1
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 2.8e-54 215.7 173 68.2
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 3.6e-54 215.3 173 67.6
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 6.2e-54 214.5 165 67.3
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 3.1e-53 212.2 173 67.1
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.1e-53 212.2 172 66.9
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 4.0e-53 211.8 173 66.5
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 5.3e-53 211.5 173 65.3
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 5.3e-53 211.5 144 73.6
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 6.9e-53 211.1 173 66.5
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 4.5e-52 208.4 141 75.2
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 8.4e-51 204.1 143 75.5
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 8.4e-51 204.1 144 72.2
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 8.4e-51 204.1 144 75.0
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.5e-49 198.7 172 65.7
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 3.5e-49 198.7 172 65.7
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 1.0e-48 197.2 165 58.8
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 1.8e-48 196.4 172 61.6
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 1.8e-48 196.4 166 61.4
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 1.4e-45 186.8 150 66.7
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 2.9e-43 179.1 165 55.2
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.8e-40 169.9 127 69.3
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 1.1e-39 167.2 119 71.4
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.3e-38 163.7 144 61.8
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 2.8e-38 162.5 111 73.0
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.5e-36 156.8 139 66.2
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 1.9e-34 149.8 126 65.1
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 2.7e-33 146.0 120 67.5
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 2.5e-31 139.4 123 61.8
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 4.1e-29 132.1 120 58.3
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 6.9e-29 131.3 165 44.8
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 6.9e-29 131.3 159 45.3
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 1.3e-27 127.1 89 68.5
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 9.3e-26 120.9 164 49.4
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 3.6e-25 119.0 99 64.6
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 6.1e-25 118.2 95 68.4
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 7.9e-25 117.9 115 54.8
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.0e-24 117.5 105 61.0
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 1.3e-24 117.1 104 60.6
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.9e-23 113.2 95 64.2
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 8.2e-22 107.8 86 64.0
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 8.2e-22 107.8 177 41.2
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 2.6e-20 102.8 71 74.6
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.1e-18 97.4 105 55.2
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 7.2e-18 94.7 59 81.4
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 7.2e-18 94.7 86 61.6
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 6.1e-17 91.7 115 50.4
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 4.4e-15 85.5 58 75.9
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 2.4e-13 79.7 47 85.1
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 9.1e-13 77.8 63 66.7
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 7.7e-12 74.7 86 50.0
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 3.8e-11 72.4 57 63.2
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 2.7e-09 66.2 43 69.8
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 3.6e-09 65.9 58 53.4


User provided reference genes

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