Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 5.4e-237 823.9 415 100.0
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 3.4e-98 362.8 468 47.4
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 3.9e-94 349.4 521 42.6
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 7.4e-93 345.1 488 45.7
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 1.2e-90 337.8 389 50.6
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.9e-88 330.5 393 48.1
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 5.1e-86 322.4 542 39.1
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 5.1e-86 322.4 526 39.5
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 6.2e-84 315.5 533 40.7
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 2.4e-83 313.5 546 39.9
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 4.0e-83 312.8 437 45.3
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 5.3e-83 312.4 501 40.7
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 9.0e-83 311.6 529 38.6
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 7.6e-82 308.5 387 46.8
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 1.0e-81 308.1 370 48.6
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 8.4e-81 305.1 339 49.3
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 3.2e-80 303.1 397 45.1
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 4.2e-80 302.8 445 43.1
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 9.3e-80 301.6 388 47.2
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 2.3e-78 297.0 444 43.5
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 1.5e-77 294.3 441 43.5
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 2.5e-77 293.5 434 44.0
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 7.4e-77 292.0 445 42.2
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 4.8e-76 289.3 505 39.4
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 8.2e-76 288.5 544 36.4
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 8.2e-76 288.5 439 43.1
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 8.2e-76 288.5 486 40.1
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 4.1e-75 286.2 391 43.7
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 9.0e-75 285.0 550 34.5
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 1.2e-74 284.6 574 36.6
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 4.5e-74 282.7 389 43.7
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.7e-73 280.8 308 50.0
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 1.7e-73 280.8 429 41.7
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 1.7e-73 280.8 434 42.4
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 2.2e-73 280.4 486 39.1
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 5.0e-73 279.3 486 38.9
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 1.9e-72 277.3 434 40.8
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.2e-72 276.2 504 36.9
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.2e-72 276.2 510 37.1
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 4.2e-72 276.2 385 46.5
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 5.5e-72 275.8 441 40.8
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 5.5e-72 275.8 424 41.7
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 5.5e-72 275.8 373 45.6
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 7.2e-72 275.4 486 38.5
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 9.3e-72 275.0 432 43.1
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.2e-71 274.6 432 40.3
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 1.6e-71 274.2 504 36.7
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.6e-71 274.2 416 43.8
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 3.6e-71 273.1 424 42.5
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.3e-70 271.2 506 36.4
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 1.8e-70 270.8 454 40.5
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.8e-70 270.8 373 45.0
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 1.9e-69 267.3 491 37.3
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 1.9e-69 267.3 546 35.5
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 4.3e-69 266.2 522 37.7
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 4.3e-69 266.2 522 37.7
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.3e-68 264.6 344 48.3
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 1.6e-68 264.2 295 49.8
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 2.2e-68 263.8 414 41.8
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 2.2e-68 263.8 467 40.3
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 2.2e-68 263.8 423 41.1
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 3.7e-68 263.1 364 44.2
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 6.9e-67 258.8 396 42.9
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 1.2e-66 258.1 411 40.4
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 1.5e-66 257.7 415 41.4
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.0e-66 257.3 504 35.3
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 4.5e-66 256.1 439 39.4
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 5.9e-66 255.8 392 41.6
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 7.7e-66 255.4 386 42.0
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 1.0e-65 255.0 440 40.0
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 1.3e-65 254.6 438 41.1
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 2.2e-65 253.8 385 40.5
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 8.5e-65 251.9 396 40.7
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 1.4e-64 251.1 435 39.5
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 7.2e-64 248.8 372 42.2
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 1.2e-63 248.1 438 39.0
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 4.6e-63 246.1 308 44.5
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 5.1e-62 242.7 430 39.5
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 7.4e-61 238.8 444 39.4
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 1.7e-60 237.7 431 39.4
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 8.2e-60 235.3 361 40.7
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 6.9e-59 232.3 342 43.0
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 9.1e-59 231.9 206 57.3
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.0e-57 228.4 296 45.3
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 2.2e-57 227.3 439 37.8
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 3.8e-57 226.5 405 40.7
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 6.5e-57 225.7 417 37.6
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 7.2e-56 222.2 305 43.9
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 7.2e-56 222.2 305 43.9
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.4e-54 218.0 389 38.0
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 6.3e-52 209.1 417 38.4
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 2.0e-50 204.1 395 39.0
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 6.5e-49 199.1 388 37.9
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 6.5e-49 199.1 353 37.7
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 1.9e-48 197.6 330 38.8
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 3.2e-48 196.8 336 38.7
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 5.5e-48 196.1 365 36.4
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 2.1e-47 194.1 366 37.7
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 1.8e-46 191.0 335 38.2
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 5.2e-46 189.5 362 37.3
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 5.3e-43 179.5 447 33.3
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 5.9e-42 176.0 358 35.5
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 4.0e-38 163.3 320 36.2
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 4.0e-38 163.3 143 59.4
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 5.2e-38 162.9 299 37.8
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 3.7e-36 156.8 301 36.9
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 6.8e-30 136.0 357 33.3
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 3.4e-29 133.7 378 29.6
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 4.7e-23 113.2 110 46.4
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 1.8e-22 111.3 142 40.8
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 4.0e-22 110.2 141 43.3
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 3.9e-09 67.0 52 55.8
Oeu041156.1 Olea europaea HOM05D006568 ORTHO05D008342 1.9e-08 64.7 70 47.1
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 6.8e-06 56.2 86 46.5


User provided reference genes

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