Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31464 Striga asiatica HOM05D013482 ORTHO05D012628 1.8e-196 689.1 367 100.0
SGA_v2.0_scaffold229G43308 Striga asiatica HOM05D013482 ORTHO05D012628 1.8e-196 689.1 367 100.0
SGA_v2.0_scaffold229G43309 Striga asiatica HOM05D013482 ORTHO05D012628 1.8e-196 689.1 367 100.0
SGA_v2.0_scaffold27G11687 Striga asiatica HOM05D013482 ORTHO05D012628 1.8e-196 689.1 367 100.0
SGA_v2.0_scaffold111G31465 Striga asiatica HOM05D013482 ORTHO05D012628 7.0e-196 687.2 366 99.7
SGA_v2.0_scaffold38G15091 Striga asiatica HOM05D013482 ORTHO05D012628 1.7e-194 682.6 366 98.9
SGA_v2.0_scaffold123G33495 Striga asiatica HOM05D013482 ORTHO05D012628 1.9e-193 679.1 367 98.6
SGA_v2.0_scaffold406G51052 Striga asiatica HOM05D013482 ORTHO05D012628 2.3e-58 230.3 136 96.3
SGA_v2.0_scaffold15G07158 Striga asiatica HOM05D013482 ORTHO05D012628 5.2e-42 176.0 144 76.4
MSTRG.26904 Avicennia marina HOM05D013482 ORTHO05D012628 1.1e-18 98.6 182 37.4
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-13 81.3 198 27.8
SalBow6G5430 Salvia bowleyana HOM05D000995 ORTHO05D001773 3.0e-13 80.5 400 26.0
MSTRG.22480 Avicennia marina HOM05D013482 ORTHO05D012628 5.1e-13 79.7 168 33.9
SalBow2G3402 Salvia bowleyana HOM05D000995 ORTHO05D001773 5.1e-13 79.7 400 27.5
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 6.7e-13 79.3 338 21.6
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-12 76.6 133 31.6
SalBow8G2838 Salvia bowleyana HOM05D000995 ORTHO05D001773 5.6e-12 76.3 402 25.6
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.4e-12 75.9 145 29.7
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.6e-12 75.5 160 29.4
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.6e-12 75.5 197 30.5
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 1.6e-11 74.7 198 26.3
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-11 74.3 198 25.3
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-11 73.6 193 26.4
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 8.1e-11 72.4 421 22.8
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-10 72.0 154 27.3
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-10 71.2 152 27.6
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 3.1e-10 70.5 400 22.8
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 4.0e-10 70.1 360 24.2
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-09 67.8 345 22.0
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.6e-09 65.9 153 28.8
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.9e-09 65.5 141 27.0
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 9.9e-09 65.5 201 24.9
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.7e-08 64.7 140 27.9
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.8e-08 63.5 314 24.8
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.8e-08 63.5 259 25.9
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.9e-08 63.2 190 23.2
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-08 62.8 320 21.6
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 6.4e-08 62.8 283 23.3
Nitab4.5_0023019g0010 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.1e-07 62.0 122 27.9
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-07 61.2 102 29.4
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-07 60.5 273 22.0
Nitab4.5_0000297g0230 Nicotiana tabacum HOM05D003911 ORTHO05D012628 4.2e-07 60.1 250 24.8
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.1e-07 59.3 211 27.5
Nitab4.5_0004356g0040 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.2e-06 58.5 111 26.1
Nitab4.5_0000160g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-06 57.4 76 34.2
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-06 57.4 190 24.2
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 3.5e-06 57.0 271 22.5
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 3.5e-06 57.0 404 22.0
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-06 56.6 320 22.8
ClCG08G000680 Citrullus lanatus HOM05D000995 ORTHO05D001773 7.9e-06 55.8 217 20.7
ClCG10G015790 Citrullus lanatus HOM05D000995 ORTHO05D001773 7.9e-06 55.8 217 19.8


User provided reference genes

Program Settings