Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 2.1e-177 625.5 305 100.0
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 3.2e-109 399.1 307 67.1
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 3.0e-107 392.5 302 67.9
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 5.2e-104 381.7 302 64.2
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 7.0e-101 371.3 307 62.9
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 3.5e-100 369.0 293 64.8
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 1.0e-99 367.5 305 61.6
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 1.7e-99 366.7 305 62.6
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 6.6e-99 364.8 305 61.3
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 8.6e-99 364.4 309 61.8
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 1.6e-97 360.1 302 61.6
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 8.1e-97 357.8 324 57.7
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 5.2e-96 355.1 297 61.3
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 2.0e-95 353.2 318 58.8
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 2.0e-95 353.2 282 62.4
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 1.3e-94 350.5 297 58.6
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 4.6e-92 342.0 297 59.6
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 7.8e-92 341.3 277 62.5
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 3.0e-91 339.3 297 58.9
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 2.5e-90 336.3 312 58.0
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 3.6e-89 332.4 293 53.9
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 3.4e-87 325.9 299 56.5
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 7.6e-87 324.7 274 59.9
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 1.7e-86 323.6 273 57.1
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 2.9e-86 322.8 287 57.1
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 1.1e-85 320.9 275 59.3
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 3.2e-85 319.3 305 52.8
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 5.4e-85 318.5 299 57.2
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 5.4e-85 318.5 304 56.2
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 9.2e-85 317.8 280 57.5
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 1.2e-84 317.4 292 58.9
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 2.7e-84 316.2 297 55.9
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 3.5e-84 315.8 280 58.2
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 1.0e-83 314.3 271 57.9
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 6.6e-83 311.6 291 55.7
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 1.5e-82 310.5 289 55.0
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 1.9e-82 310.1 296 56.4
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 1.9e-82 310.1 271 58.3
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 2.1e-81 306.6 278 55.4
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 3.6e-81 305.8 294 54.4
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 3.6e-81 305.8 307 53.1
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 1.1e-80 304.3 311 53.7
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 1.5e-79 300.4 303 55.1
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 5.8e-79 298.5 278 55.4
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 1.7e-78 297.0 290 53.8
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 2.4e-77 293.1 288 53.5
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 1.6e-76 290.4 271 54.6
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 2.3e-75 286.6 306 54.6
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 8.7e-75 284.6 278 53.6
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 3.6e-73 279.3 278 53.6
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 3.6e-73 279.3 271 53.9
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.4e-72 276.6 271 53.5
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 5.3e-72 275.4 288 53.1
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 6.9e-72 275.0 271 52.0
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 9.0e-72 274.6 290 54.1
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 7.6e-71 271.6 288 51.4
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 2.1e-68 263.5 302 47.4
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 4.6e-68 262.3 293 49.8
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 6.0e-68 261.9 201 64.2
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 2.3e-67 260.0 261 54.4
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 8.7e-67 258.1 284 48.9
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 4.3e-58 229.2 232 52.6
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 7.6e-55 218.4 276 46.0
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 2.4e-48 196.8 161 61.5
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 5.0e-46 189.1 170 59.4
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 2.9e-38 163.3 212 47.2
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 1.4e-37 161.0 132 59.8
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 5.3e-32 142.5 117 61.5
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 1.4e-27 127.9 315 37.5
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 6.5e-22 109.0 306 30.1
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 3.6e-20 103.2 115 48.7
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 4.7e-20 102.8 80 62.5
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 9.4e-13 78.6 102 47.1
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 2.2e-09 67.4 41 70.7


User provided reference genes

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