Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold228G43267 Striga asiatica HOM05D007589 ORTHO05D009610 8.1e-73 276.9 136 100.0
SGA_v2.0_scaffold25G10827 Striga asiatica HOM05D007589 ORTHO05D009610 6.2e-33 144.4 110 68.2
SGA_v2.0_scaffold90G27887 Striga asiatica HOM05D007589 ORTHO05D009610 4.6e-20 101.7 108 54.6
MSTRG.11473 Avicennia marina HOM05D007589 ORTHO05D009610 3.6e-12 75.5 85 49.4
Nn4g22695 Nelumbo nucifera HOM05D007589 ORTHO05D009610 3.0e-11 72.4 89 44.9
Nitab4.5_0003229g0060 Nicotiana tabacum HOM05D007589 ORTHO05D009610 4.4e-10 68.6 82 43.9
Dinv38564 Davidia involucrata HOM05D007589 ORTHO05D009610 3.7e-09 65.5 98 40.8
TAR629G1736 Trochodendron aralioides HOM05D007589 ORTHO05D009610 8.2e-09 64.3 91 42.9
Haze_07540 Corylus avellana HOM05D007589 ORTHO05D009610 1.4e-08 63.5 89 39.3
QL10p010870 Quercus lobata HOM05D007589 ORTHO05D009610 1.4e-08 63.5 89 42.7
Nitab4.5_0001207g0080 Nicotiana tabacum HOM05D007589 ORTHO05D009610 3.1e-08 62.4 94 42.6
Cfa019165 Carpinus fangiana HOM05D007589 ORTHO05D009610 7.0e-08 61.2 90 40.0
Atru.chr9.2516 Acer truncatum HOM05D007589 ORTHO05D009610 1.2e-07 60.5 89 41.6
CiPaw.11G023600 Carya illinoinensis HOM05D007589 ORTHO05D009610 3.4e-07 58.9 91 44.0
Glyma.05G039100 Glycine max HOM05D007589 ORTHO05D009610 3.4e-07 58.9 82 42.7
Phvul.003G202100 Phaseolus vulgaris HOM05D007589 ORTHO05D009610 5.9e-07 58.2 81 40.7
VMungo1215G1669 Vigna mungo HOM05D007589 ORTHO05D009610 5.9e-07 58.2 81 39.5
DCAR_016475 Daucus carota HOM05D007589 ORTHO05D009610 7.7e-07 57.8 84 39.3
Ca_21937_v3 Cicer arietinum L. HOM05D007589 ORTHO05D009610 2.2e-06 56.2 94 37.2
Medtr4g105520 Medicago truncatula HOM05D007589 ORTHO05D009610 2.2e-06 56.2 94 36.2
Lj4g0004851 Lotus japonicus HOM05D007589 ORTHO05D009610 2.9e-06 55.8 85 40.0
MBI16_g14592_MAGBIO Magnolia biondii HOM05D007589 ORTHO05D009610 3.8e-06 55.5 89 39.3
Lsat_1_v5_gn_4_75740 Lactuca sativa HOM05D007589 ORTHO05D009610 6.5e-06 54.7 91 36.3
Sed0025689 Sechium edule HOM05D007589 ORTHO05D009610 8.5e-06 54.3 89 38.2


User provided reference genes

Program Settings